BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0444.p (178 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774012.1| 2,4'-dihydroxyacetophenone dioxygenase [Herb... 342 1e-92 ref|ZP_03269583.1| cupin 2, conserved barrel [Burkholderia sp. H... 283 8e-75 ref|YP_003607394.1| cupin [Burkholderia sp. CCGE1002] >gi|295438... 279 1e-73 ref|YP_002497974.1| cupin 2, conserved barrel [Methylobacterium ... 278 2e-73 ref|YP_550151.1| cupin 2 barrel-domain containing protein [Polar... 271 2e-71 >ref|YP_003774012.1| 2,4'-dihydroxyacetophenone dioxygenase [Herbaspirillum seropedicae SmR1] gb|ADJ62104.1| 2,4'-dihydroxyacetophenone dioxygenase protein [Herbaspirillum seropedicae SmR1] Length = 175 Score = 342 bits (877), Expect = 1e-92, Method: Composition-based stats. Identities = 162/173 (93%), Positives = 172/173 (99%) Query: 6 TPMPAELKMKPYQFPNPKEAPLEIVVNPAVPEDERVWVPQAENVWFRPLCLNVSQGYWTN 65 +PMPA+ +M+PYQFPNPKEAPLEIVVNPA+PEDER+WVPQAENVWFRPLCLNVSQGYWTN Sbjct: 3 SPMPADSRMQPYQFPNPKEAPLEIVVNPAIPEDERIWVPQAENVWFRPLCLNVSQGYWTN 62 Query: 66 LLRVRKSGVLSRHRHPAPVHGMVLKGRWRYLEHDWIAEQGSYVFEPPGETHTLYVPEDVE 125 LLRVRKSGVLSRHRHPAPVHGMVLKG+WRYLEHDWIAEQGSYVFEPPGETHTLYVPE+V+ Sbjct: 63 LLRVRKSGVLSRHRHPAPVHGMVLKGKWRYLEHDWIAEQGSYVFEPPGETHTLYVPEEVD 122 Query: 126 EMITYFHITGVMFYCDPWGKFEGYEDVFTKLDMCRKHYEAVGLGSNYVDRFVR 178 EMITYFHITGVMFYCDPWGKFEGYEDVFTKLDMCRKHYEAVGLGS+YVDRFVR Sbjct: 123 EMITYFHITGVMFYCDPWGKFEGYEDVFTKLDMCRKHYEAVGLGSDYVDRFVR 175 >ref|ZP_03269583.1| cupin 2, conserved barrel [Burkholderia sp. H160] gb|EDZ98836.1| cupin 2, conserved barrel [Burkholderia sp. H160] Length = 173 Score = 283 bits (724), Expect = 8e-75, Method: Composition-based stats. Identities = 133/172 (77%), Positives = 147/172 (85%) Query: 7 PMPAELKMKPYQFPNPKEAPLEIVVNPAVPEDERVWVPQAENVWFRPLCLNVSQGYWTNL 66 P + + PYQ P PKEA EIVV A+P DERVWVPQAENV FRPLCLN SQGYW NL Sbjct: 2 PQANQSDLTPYQLPFPKEAQKEIVVPFAIPTDERVWVPQAENVSFRPLCLNASQGYWMNL 61 Query: 67 LRVRKSGVLSRHRHPAPVHGMVLKGRWRYLEHDWIAEQGSYVFEPPGETHTLYVPEDVEE 126 LRVR+SGVLSRHRHP VHGMVLKGRWRYLEHDW+A +GSYV+EPPGETHTLYVPEDVEE Sbjct: 62 LRVRRSGVLSRHRHPQGVHGMVLKGRWRYLEHDWVATEGSYVYEPPGETHTLYVPEDVEE 121 Query: 127 MITYFHITGVMFYCDPWGKFEGYEDVFTKLDMCRKHYEAVGLGSNYVDRFVR 178 MITYF + GVMFYCDP+G + GYEDVFTK+DMCRKHY AVGLG +YVD+F+R Sbjct: 122 MITYFQVNGVMFYCDPYGNYTGYEDVFTKIDMCRKHYAAVGLGEDYVDQFIR 173 >ref|YP_003607394.1| cupin [Burkholderia sp. CCGE1002] gb|ADG17883.1| cupin 2, barrel [Burkholderia sp. CCGE1002] Length = 173 Score = 279 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 131/165 (79%), Positives = 144/165 (87%) Query: 14 MKPYQFPNPKEAPLEIVVNPAVPEDERVWVPQAENVWFRPLCLNVSQGYWTNLLRVRKSG 73 + PYQ P PKEA EIVV A+P DERVWVPQAENV FRPLCLN SQGYW NLLRVR+SG Sbjct: 9 LTPYQLPFPKEAQKEIVVPFAIPTDERVWVPQAENVSFRPLCLNASQGYWMNLLRVRRSG 68 Query: 74 VLSRHRHPAPVHGMVLKGRWRYLEHDWIAEQGSYVFEPPGETHTLYVPEDVEEMITYFHI 133 VLSRHRHP VHGMVLKG WRYLEHDW+A +GSYV+EPPGETHTLYVPEDVEEMITYF + Sbjct: 69 VLSRHRHPQAVHGMVLKGHWRYLEHDWVATEGSYVYEPPGETHTLYVPEDVEEMITYFQV 128 Query: 134 TGVMFYCDPWGKFEGYEDVFTKLDMCRKHYEAVGLGSNYVDRFVR 178 GVMFYCDP+G + GYEDVFTK+DMCRKHY AVGLG +YVD+F+R Sbjct: 129 NGVMFYCDPYGNYTGYEDVFTKIDMCRKHYTAVGLGEDYVDQFIR 173 >ref|YP_002497974.1| cupin 2, conserved barrel [Methylobacterium nodulans ORS 2060] gb|ACL57671.1| cupin 2, conserved barrel [Methylobacterium nodulans ORS 2060] Length = 185 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 125/169 (73%), Positives = 144/169 (85%) Query: 10 AELKMKPYQFPNPKEAPLEIVVNPAVPEDERVWVPQAENVWFRPLCLNVSQGYWTNLLRV 69 A LK PYQFP PKE ++VV PA+P+D+R+WVPQAENVWFRPLCLNVS GYW NLL+V Sbjct: 17 ATLKRMPYQFPQPKEGLPDLVVAPAIPQDDRIWVPQAENVWFRPLCLNVSAGYWMNLLKV 76 Query: 70 RKSGVLSRHRHPAPVHGMVLKGRWRYLEHDWIAEQGSYVFEPPGETHTLYVPEDVEEMIT 129 RKSG+LSRHRHP PVH VLKG WRYLEHDWIA +GSY FEPPGETHTL V E VEEMIT Sbjct: 77 RKSGILSRHRHPGPVHAFVLKGSWRYLEHDWIATEGSYAFEPPGETHTLVVDEGVEEMIT 136 Query: 130 YFHITGVMFYCDPWGKFEGYEDVFTKLDMCRKHYEAVGLGSNYVDRFVR 178 YF + G M+Y DPWG+ GYEDVFTK++MCRKHYEA+GLG++YVD+F+R Sbjct: 137 YFQVNGCMYYVDPWGRHTGYEDVFTKIEMCRKHYEAIGLGADYVDQFIR 185 >ref|YP_550151.1| cupin 2 barrel-domain containing protein [Polaromonas sp. JS666] gb|ABE45253.1| Cupin 2, conserved barrel [Polaromonas sp. JS666] Length = 175 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 128/165 (77%), Positives = 142/165 (86%) Query: 14 MKPYQFPNPKEAPLEIVVNPAVPEDERVWVPQAENVWFRPLCLNVSQGYWTNLLRVRKSG 73 + PYQFPNP A EIVV A+P DER+WVPQAENVWFRPLCLN SQGYW NLLRVRKSG Sbjct: 11 LMPYQFPNPAAALPEIVVQHAIPTDERLWVPQAENVWFRPLCLNASQGYWMNLLRVRKSG 70 Query: 74 VLSRHRHPAPVHGMVLKGRWRYLEHDWIAEQGSYVFEPPGETHTLYVPEDVEEMITYFHI 133 VLSRHRHP VHG VLKGRWRYLEHDW A +GSYVFEPPGETHTLYVPEDVEEMITYF + Sbjct: 71 VLSRHRHPQAVHGFVLKGRWRYLEHDWEATEGSYVFEPPGETHTLYVPEDVEEMITYFQV 130 Query: 134 TGVMFYCDPWGKFEGYEDVFTKLDMCRKHYEAVGLGSNYVDRFVR 178 GVM+Y DPWGK GYEDVFTK++MC KH+E+VGLG++Y +F+R Sbjct: 131 NGVMYYTDPWGKGMGYEDVFTKIEMCNKHFESVGLGADYTKQFIR 175