BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0441.p (262 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774009.1| short chain dehydrogenase/reductase family p... 406 e-111 ref|YP_550150.1| short-chain dehydrogenase/reductase SDR [Polaro... 299 2e-79 ref|YP_004118460.1| short-chain dehydrogenase/reductase SDR [Pan... 299 3e-79 ref|YP_003607396.1| short-chain dehydrogenase/reductase SDR [Bur... 294 1e-77 ref|ZP_03269581.1| short-chain dehydrogenase/reductase SDR [Burk... 290 1e-76 >ref|YP_003774009.1| short chain dehydrogenase/reductase family protein [Herbaspirillum seropedicae SmR1] gb|ADJ62101.1| short chain dehydrogenase/reductase family protein [Herbaspirillum seropedicae SmR1] Length = 241 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 231/241 (95%), Positives = 237/241 (98%) Query: 22 MSFIPDLLRGKTALVTGGTQGIGAAVARQLVALGARVIAAGLPPFAHEEFAGSEVTLVEM 81 MSFIPDLL+GKTALVTGGTQGIGAAVARQLVALGARVIAAGLPPFAHEEFAGSEVTLVEM Sbjct: 1 MSFIPDLLKGKTALVTGGTQGIGAAVARQLVALGARVIAAGLPPFAHEEFAGSEVTLVEM 60 Query: 82 NVASEESVRAALAGLTQLDIVVNCAGIIKRGEELETDVFEQVIAVNLTGTMRVCAASRAL 141 NVASEESVRAALAGLTQLDIVVNCAGIIKRG ELET+VFEQVIAVNLTGTMRVCAA+R L Sbjct: 61 NVASEESVRAALAGLTQLDIVVNCAGIIKRGAELETEVFEQVIAVNLTGTMRVCAAAREL 120 Query: 142 LKQSGGCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGWIA 201 L+QS GCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGWIA Sbjct: 121 LRQSRGCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGWIA 180 Query: 202 TPLTQALQDDPVRAGPILARTPLGRWGKPEDIGNVVAFLCSPAASFMTGAIVPVDGGYLV 261 TPLTQALQDDPVRAGPILARTPLGRWG+PED+G VVAFLCSPAASFMTGAIVPVDGGYLV Sbjct: 181 TPLTQALQDDPVRAGPILARTPLGRWGQPEDVGQVVAFLCSPAASFMTGAIVPVDGGYLV 240 Query: 262 A 262 A Sbjct: 241 A 241 >ref|YP_550150.1| short-chain dehydrogenase/reductase SDR [Polaromonas sp. JS666] gb|ABE45252.1| short-chain dehydrogenase/reductase SDR [Polaromonas sp. JS666] Length = 239 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 171/241 (70%), Positives = 194/241 (80%), Gaps = 2/241 (0%) Query: 22 MSFIPDLLRGKTALVTGGTQGIGAAVARQLVALGARVIAAGLPPFAHEEFAGSEVTLVEM 81 M++ +L +GK ALV G TQGIGA +A L ALGA V A GL P + + V + + Sbjct: 1 MTYQAELFKGKRALVAGATQGIGAVIANHLAALGAEVTALGLGP--GDGTLDAAVAVRQA 58 Query: 82 NVASEESVRAALAGLTQLDIVVNCAGIIKRGEELETDVFEQVIAVNLTGTMRVCAASRAL 141 +V S +S+ AALAG+ QLDIV NCAGIIKRG E + DVFEQV+AVNLTGTMRVC A+R Sbjct: 59 DVTSAQSLDAALAGMDQLDIVFNCAGIIKRGAEHDLDVFEQVLAVNLTGTMRVCTATRER 118 Query: 142 LKQSGGCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGWIA 201 LK S GCIVNTASMLSFFGGGLVPGY+ASKGGVAQLTKSLAIAYAADGIRVNA+APGWIA Sbjct: 119 LKASRGCIVNTASMLSFFGGGLVPGYAASKGGVAQLTKSLAIAYAADGIRVNAIAPGWIA 178 Query: 202 TPLTQALQDDPVRAGPILARTPLGRWGKPEDIGNVVAFLCSPAASFMTGAIVPVDGGYLV 261 TPLTQALQDDP RAGPILARTPLGRWG P D+ FLC+PAA+FMTG I+PVDGGYLV Sbjct: 179 TPLTQALQDDPARAGPILARTPLGRWGTPADVAQAAMFLCTPAAAFMTGVILPVDGGYLV 238 Query: 262 A 262 + Sbjct: 239 S 239 >ref|YP_004118460.1| short-chain dehydrogenase/reductase SDR [Pantoea sp. At-9b] gb|ADU71904.1| short-chain dehydrogenase/reductase SDR [Pantoea sp. At-9b] Length = 242 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 159/241 (65%), Positives = 188/241 (78%) Query: 22 MSFIPDLLRGKTALVTGGTQGIGAAVARQLVALGARVIAAGLPPFAHEEFAGSEVTLVEM 81 M+F P L GKTALVTGGT GIGA + QL LGA+VIAAG+ H+ + + + E+ Sbjct: 2 MTFHPALFAGKTALVTGGTSGIGAGIVNQLARLGAQVIAAGVGSDPHQFPVNTRIRVQEL 61 Query: 82 NVASEESVRAALAGLTQLDIVVNCAGIIKRGEELETDVFEQVIAVNLTGTMRVCAASRAL 141 +V +++ A + L QLD++VNCAGII RG E + DVFE+V+ +NLTGTMR C A+R Sbjct: 62 DVQDNQAIMALINTLPQLDLLVNCAGIISRGAEHDVDVFEKVLDINLTGTMRCCRAAREK 121 Query: 142 LKQSGGCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGWIA 201 L QS GCIVNTASMLSFFGGGLVPGYSASKGG+ QLTKSLAIA+A GIRVNAVAPGWIA Sbjct: 122 LAQSKGCIVNTASMLSFFGGGLVPGYSASKGGIMQLTKSLAIAWAEQGIRVNAVAPGWIA 181 Query: 202 TPLTQALQDDPVRAGPILARTPLGRWGKPEDIGNVVAFLCSPAASFMTGAIVPVDGGYLV 261 T LTQALQDDP RA PIL+RTPL RWG+P+D+ V FLCSPAASF+TG I+PVDGGYL Sbjct: 182 TALTQALQDDPQRAQPILSRTPLKRWGQPDDVAQAVTFLCSPAASFITGIILPVDGGYLT 241 Query: 262 A 262 A Sbjct: 242 A 242 >ref|YP_003607396.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1002] gb|ADG17885.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1002] Length = 242 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 168/242 (69%), Positives = 188/242 (77%), Gaps = 1/242 (0%) Query: 22 MSFIPDLLRGKTALVTGGTQGIGAAVARQLVALGARVIAAGLP-PFAHEEFAGSEVTLVE 80 M+F LL GKTALVTGG GIGAA+A L LGA +AAGLP P E E+ V Sbjct: 1 MTFQNQLLEGKTALVTGGLSGIGAAIANALAQLGAHTVAAGLPLPEGAPETLDREIPRVA 60 Query: 81 MNVASEESVRAALAGLTQLDIVVNCAGIIKRGEELETDVFEQVIAVNLTGTMRVCAASRA 140 ++V S ++V AA+ +LDIVVNCAG+I R EE DVFE+V+ +NL GTMRVCAA+R Sbjct: 61 LDVRSGDAVSAAVNAFERLDIVVNCAGVISRVEEHRLDVFERVMDINLNGTMRVCAAARD 120 Query: 141 LLKQSGGCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGWI 200 LLK S GCIVNTASMLSFFGGGLVP YSASKG VAQLTKSLAIAYAADGIRVNAVAPGWI Sbjct: 121 LLKASAGCIVNTASMLSFFGGGLVPAYSASKGAVAQLTKSLAIAYAADGIRVNAVAPGWI 180 Query: 201 ATPLTQALQDDPVRAGPILARTPLGRWGKPEDIGNVVAFLCSPAASFMTGAIVPVDGGYL 260 ATPLTQALQDD R+ IL RTPL RWG P+++ V FLC+PAASFMTGAIVPVDGGYL Sbjct: 181 ATPLTQALQDDDRRSQAILERTPLRRWGTPQEVAQVAVFLCTPAASFMTGAIVPVDGGYL 240 Query: 261 VA 262 VA Sbjct: 241 VA 242 >ref|ZP_03269581.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. H160] gb|EDZ98834.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. H160] Length = 242 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 164/242 (67%), Positives = 188/242 (77%), Gaps = 1/242 (0%) Query: 22 MSFIPDLLRGKTALVTGGTQGIGAAVARQLVALGARVIAAGLP-PFAHEEFAGSEVTLVE 80 M+F LL GKTALVTGG GIGAA+A L LGA +AAGLP P + E+ Sbjct: 1 MTFQNQLLEGKTALVTGGMSGIGAAIANALAQLGAHTVAAGLPLPEGAPDTLNREIARTA 60 Query: 81 MNVASEESVRAALAGLTQLDIVVNCAGIIKRGEELETDVFEQVIAVNLTGTMRVCAASRA 140 ++V S ++V AA++ +LDIVVNCAG+I R EE DVFE+V+ +NL GTMRVCAA+R Sbjct: 61 LDVRSGDAVTAAVSAFERLDIVVNCAGVISRVEEHRLDVFERVMDINLNGTMRVCAAARP 120 Query: 141 LLKQSGGCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGWI 200 LLK S GCIVNTASMLSFFGGGLVP YSASKG VAQLTKSLA+AYAADG+RVNA+APGWI Sbjct: 121 LLKASAGCIVNTASMLSFFGGGLVPAYSASKGAVAQLTKSLALAYAADGVRVNAIAPGWI 180 Query: 201 ATPLTQALQDDPVRAGPILARTPLGRWGKPEDIGNVVAFLCSPAASFMTGAIVPVDGGYL 260 ATPLTQALQDD R+ IL RTPL RWG PE++ V FLC+PAASFMTGAIVPVDGGYL Sbjct: 181 ATPLTQALQDDDARSQAILERTPLRRWGTPEEVAQVAVFLCTPAASFMTGAIVPVDGGYL 240 Query: 261 VA 262 VA Sbjct: 241 VA 242