BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0437.p (345 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001352936.1| short chain dehydrogenase [Janthinobacterium... 409 e-112 ref|YP_004751328.1| short-chain alcohol dehydrogenases-like prot... 392 e-107 ref|YP_001895638.1| short chain dehydrogenase [Burkholderia phyt... 385 e-105 ref|YP_558819.1| short chain dehydrogenase [Burkholderia xenovor... 383 e-104 ref|YP_004118274.1| short-chain dehydrogenase/reductase SDR [Pan... 377 e-102 >ref|YP_001352936.1| short chain dehydrogenase [Janthinobacterium sp. Marseille] gb|ABR91292.1| short-chain dehydrogenase/reductase SDR [Janthinobacterium sp. Marseille] Length = 282 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 211/280 (75%), Positives = 236/280 (84%), Gaps = 4/280 (1%) Query: 70 MKNSKTLHFLITGVSSGFGRALADAALQAGHSVTGTVRSQTAKEQFEQLDPARATAIVLD 129 M N+ ++ LITGVSSGFGRA A+ AL+ GH+V GTVR+ AK FE L RA +VLD Sbjct: 1 MANTTKMNLLITGVSSGFGRAFAETALREGHTVIGTVRNDAAKRDFEDLAIGRAIGVVLD 60 Query: 130 VTDFPAI----AAVAEHLAPVDVLVNNAGYGHEGALEESSLDEMRHQFDVNVFGAVAMMK 185 VTDF AI A+ + + PVDVLVNNAGYGHEG LEES L+EMRHQFDVNVFGAVAM+K Sbjct: 61 VTDFSAIDAAVASASSKVGPVDVLVNNAGYGHEGILEESPLEEMRHQFDVNVFGAVAMIK 120 Query: 186 AVLPTMRARRSGHIINITSMGGFITMPGIAYYCGSKFALEGISETLAKEVAAFGIKVTAV 245 AVLP+MRARR+GHIINITSMGGFITMPGIAYYCGSKFALEGISETLAKEVA FGIKVTAV Sbjct: 121 AVLPSMRARRTGHIINITSMGGFITMPGIAYYCGSKFALEGISETLAKEVAGFGIKVTAV 180 Query: 246 APGSFRTDWAGRSMVRSPRSIADYDAVIDPIRAARQAKSGHQLGDPAKAAQVILDIAGDA 305 APGSFRTDWAGRSMVRS RSIADYD +IDPIRAARQ KSGHQ+G+P +AAQV+L IA Sbjct: 181 APGSFRTDWAGRSMVRSSRSIADYDKLIDPIRAARQEKSGHQIGNPLQAAQVLLSIANSP 240 Query: 306 NAPVHLLLGSDAVKLVREKLARMGEEIDAWETISASTDFR 345 +APVHLLLGSDAVKLVREK+A + EI AWE +S STDF+ Sbjct: 241 DAPVHLLLGSDAVKLVREKIAVLSGEISAWEEVSMSTDFQ 280 >ref|YP_004751328.1| short-chain alcohol dehydrogenases-like protein [Collimonas fungivorans Ter331] gb|AEK60505.1| short-chain alcohol dehydrogenases-like protein [Collimonas fungivorans Ter331] Length = 279 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 205/278 (73%), Positives = 230/278 (82%), Gaps = 4/278 (1%) Query: 70 MKNSKTLHFLITGVSSGFGRALADAALQAGHSVTGTVRSQTAKEQFEQLDPARATAIVLD 129 M + FLITGVSSGFGRA A AAL AGH+V GTVR+ +AK+ FE L RA A+VLD Sbjct: 1 MGEPTEMKFLITGVSSGFGRAFAVAALAAGHTVIGTVRNASAKKDFEDLAIGRAIAVVLD 60 Query: 130 VTDFPAI----AAVAEHLAPVDVLVNNAGYGHEGALEESSLDEMRHQFDVNVFGAVAMMK 185 VTDF AI A+ E + P+DVLVNNAGYGHEG LEES L+EMR QFDVNVFGAVAM+K Sbjct: 61 VTDFSAIDAKITAITEKVGPIDVLVNNAGYGHEGTLEESPLEEMRRQFDVNVFGAVAMIK 120 Query: 186 AVLPTMRARRSGHIINITSMGGFITMPGIAYYCGSKFALEGISETLAKEVAAFGIKVTAV 245 AVLP+MR RRSGHIINITSMGGFITMPGIAYYCGSKFALEGISETLAKEVA FG+KVTAV Sbjct: 121 AVLPSMRERRSGHIINITSMGGFITMPGIAYYCGSKFALEGISETLAKEVAGFGVKVTAV 180 Query: 246 APGSFRTDWAGRSMVRSPRSIADYDAVIDPIRAARQAKSGHQLGDPAKAAQVILDIAGDA 305 APGSFRTDWAGRSMVRSPR I DYD + DPIR ARQ KSG QLGDPAKAA+++L IA Sbjct: 181 APGSFRTDWAGRSMVRSPRHIPDYDTLFDPIRGARQEKSGKQLGDPAKAAEILLKIANAP 240 Query: 306 NAPVHLLLGSDAVKLVREKLARMGEEIDAWETISASTD 343 +APVHLLLGSDAV LV+ K+A M +EI++W ++S STD Sbjct: 241 DAPVHLLLGSDAVTLVKNKIAAMSDEIESWASVSTSTD 278 >ref|YP_001895638.1| short chain dehydrogenase [Burkholderia phytofirmans PsJN] gb|ACD16414.1| short-chain dehydrogenase/reductase SDR [Burkholderia phytofirmans PsJN] Length = 276 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 197/271 (72%), Positives = 226/271 (83%), Gaps = 4/271 (1%) Query: 78 FLITGVSSGFGRALADAALQAGHSVTGTVRSQTAKEQFEQLDPARATAIVLDVTDF---- 133 FLITGVSSGFGRA A AAL AGH+V GTVR++ A++ F L RA A+VLDVTDF Sbjct: 5 FLITGVSSGFGRAFAQAALDAGHTVVGTVRNEAARDAFTALAAERAHAVVLDVTDFEAIA 64 Query: 134 PAIAAVAEHLAPVDVLVNNAGYGHEGALEESSLDEMRHQFDVNVFGAVAMMKAVLPTMRA 193 PA+AA+ + + P+DVLVNNAGYGHEG LEES LD++R QFDVNVFGAVAM+KAVLP MR Sbjct: 65 PAVAAITQTVGPIDVLVNNAGYGHEGTLEESPLDDLRRQFDVNVFGAVAMIKAVLPAMRE 124 Query: 194 RRSGHIINITSMGGFITMPGIAYYCGSKFALEGISETLAKEVAAFGIKVTAVAPGSFRTD 253 RRSGHI+NITSMGGFITMPGIAYYCGSKFALEGI++ LAKEVA FGIKVTAVAPGSFRTD Sbjct: 125 RRSGHIVNITSMGGFITMPGIAYYCGSKFALEGITDALAKEVAGFGIKVTAVAPGSFRTD 184 Query: 254 WAGRSMVRSPRSIADYDAVIDPIRAARQAKSGHQLGDPAKAAQVILDIAGDANAPVHLLL 313 WAGRSMVR+ RSIADYDA+ DPIR AR+AKSG Q GDP KAAQ +L+I N PVHLLL Sbjct: 185 WAGRSMVRAGRSIADYDALFDPIREAREAKSGKQAGDPRKAAQALLEIVASTNPPVHLLL 244 Query: 314 GSDAVKLVREKLARMGEEIDAWETISASTDF 344 G+DA+ LV+ KL + +EI+ WET+S STDF Sbjct: 245 GNDALDLVKTKLTALNQEIEQWETLSRSTDF 275 >ref|YP_558819.1| short chain dehydrogenase [Burkholderia xenovorans LB400] gb|ABE30767.1| Putative short-chain dehydrogenase/reductase SDR [Burkholderia xenovorans LB400] Length = 276 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 201/271 (74%), Positives = 224/271 (82%), Gaps = 4/271 (1%) Query: 78 FLITGVSSGFGRALADAALQAGHSVTGTVRSQTAKEQFEQLDPARATAIVLDVTDF---- 133 FLITGVSSGFG+A A AAL AGH+V GTVR++ A+ FE L RA AIVLDVT F Sbjct: 5 FLITGVSSGFGQAFAQAALDAGHTVVGTVRNEAARSAFEALAAERAHAIVLDVTQFDAIA 64 Query: 134 PAIAAVAEHLAPVDVLVNNAGYGHEGALEESSLDEMRHQFDVNVFGAVAMMKAVLPTMRA 193 PA+AA+ + + P+DVLVNNAGYGHEG LEES LD++R QFDVNVFGAVAM+KAVLP MR Sbjct: 65 PAVAAITQTVGPIDVLVNNAGYGHEGTLEESPLDDLRRQFDVNVFGAVAMIKAVLPAMRE 124 Query: 194 RRSGHIINITSMGGFITMPGIAYYCGSKFALEGISETLAKEVAAFGIKVTAVAPGSFRTD 253 RRSGHIINITSMGGFITMPGIAYYCGSKFALEGI+ETLAKEVA FGIKVTAVAPGSFRTD Sbjct: 125 RRSGHIINITSMGGFITMPGIAYYCGSKFALEGITETLAKEVAGFGIKVTAVAPGSFRTD 184 Query: 254 WAGRSMVRSPRSIADYDAVIDPIRAARQAKSGHQLGDPAKAAQVILDIAGDANAPVHLLL 313 WAGRSMVR+ RSI+DYDA+ DPIR AR+ KSG Q GDP KAAQ +L I N PVHLLL Sbjct: 185 WAGRSMVRAGRSISDYDALFDPIREARETKSGKQAGDPRKAAQALLAIVAANNPPVHLLL 244 Query: 314 GSDAVKLVREKLARMGEEIDAWETISASTDF 344 G+DA LV+ KLA +G EIDAWE +S STDF Sbjct: 245 GNDAFDLVKTKLAALGAEIDAWEALSRSTDF 275 >ref|YP_004118274.1| short-chain dehydrogenase/reductase SDR [Pantoea sp. At-9b] gb|ADU71718.1| short-chain dehydrogenase/reductase SDR [Pantoea sp. At-9b] Length = 278 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 197/278 (70%), Positives = 219/278 (78%), Gaps = 6/278 (2%) Query: 70 MKNSKTLHFLITGVSSGFGRALADAALQAGHSVTGTVRSQTAKEQFEQLDPARATAIVLD 129 M + KTL ITGVSSGFGRALA AL+ GH V GTVR Q AK++FE L P A+A +LD Sbjct: 1 MSSVKTL--FITGVSSGFGRALAQQALREGHRVIGTVRHQAAKQEFEALKPGHASACLLD 58 Query: 130 VTDFPAI----AAVAEHLAPVDVLVNNAGYGHEGALEESSLDEMRHQFDVNVFGAVAMMK 185 VTDF AI AAV L P+DVLVNNAGYGHEG +EESSL+EMR QF+VNVFGAVAM+K Sbjct: 59 VTDFAAIDDCIAAVESSLGPIDVLVNNAGYGHEGVMEESSLEEMRRQFEVNVFGAVAMIK 118 Query: 186 AVLPTMRARRSGHIINITSMGGFITMPGIAYYCGSKFALEGISETLAKEVAAFGIKVTAV 245 AVLP+MR RR GHIINITSMGG+ITMPGI YYCGSKFALEGIS+ L KE+ FGI VTAV Sbjct: 119 AVLPSMRQRRRGHIINITSMGGYITMPGITYYCGSKFALEGISDALGKELQPFGIFVTAV 178 Query: 246 APGSFRTDWAGRSMVRSPRSIADYDAVIDPIRAARQAKSGHQLGDPAKAAQVILDIAGDA 305 APGSFRTDWAGRSMVRS RSI DYDA+ DPIR AR KSG QLGDP KAAQ IL + Sbjct: 179 APGSFRTDWAGRSMVRSARSIPDYDALFDPIRQARVEKSGKQLGDPQKAAQAILTLIATH 238 Query: 306 NAPVHLLLGSDAVKLVREKLARMGEEIDAWETISASTD 343 N P HLLLGSDA+ LVR KLA + E+ID WE ++ STD Sbjct: 239 NPPPHLLLGSDALALVRNKLAALHEDIDRWEELTRSTD 276