BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0426.p (283 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773704.1| sugar ABC transporter permease [Herbaspirill... 512 e-143 ref|YP_004750960.1| binding-protein-dependent transport systems ... 471 e-131 ref|YP_001858570.1| binding-protein-dependent transport systems ... 436 e-120 ref|ZP_03263954.1| binding-protein-dependent transport systems i... 432 e-119 ref|YP_001888331.1| binding-protein-dependent transport systems ... 432 e-119 >ref|YP_003773704.1| sugar ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ61796.1| ABC-type sugar transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 283 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 282/283 (99%), Positives = 282/283 (99%) Query: 1 MFPMPIEKWKPINRALYRASLPVALLIWLLPMLTALVTSIRSNDELMAGNYWGWPQDFAM 60 MFPMPIEKWKPINRALYRASLPVALLIWLLPML ALVTSIRSNDELMAGNYWGWPQDFAM Sbjct: 1 MFPMPIEKWKPINRALYRASLPVALLIWLLPMLAALVTSIRSNDELMAGNYWGWPQDFAM 60 Query: 61 LENYREALTASPMLHYFWNSCLITIPSVIGAISLAAMAGFALSTYQFRGNTVLFATFVAC 120 LENYREALTASPMLHYFWNSCLITIPSVIGAISLAAMAGFALSTYQFRGNTVLFATFVAC Sbjct: 61 LENYREALTASPMLHYFWNSCLITIPSVIGAISLAAMAGFALSTYQFRGNTVLFATFVAC 120 Query: 121 NFVPQQILMIPVRDLSLSLGLFNTITGMMLFHIAMQTGFCTLFLRNFIKQLPFEMIEAAR 180 NFVPQQILMIPVRDLSLSLGLFNTITGMMLFHIAMQTGFCTLFLRNFIKQLPFEMIEAAR Sbjct: 121 NFVPQQILMIPVRDLSLSLGLFNTITGMMLFHIAMQTGFCTLFLRNFIKQLPFEMIEAAR 180 Query: 181 IEGASEWTVFYRIVLPLIRPALAALAVLVFTFVWNDYFWALVLTQGDDVAPITVGVAALR 240 IEGASEWTVFYRIVLPLIRPALAALAVLVFTFVWNDYFWALVLTQGDDVAPITVGVAALR Sbjct: 181 IEGASEWTVFYRIVLPLIRPALAALAVLVFTFVWNDYFWALVLTQGDDVAPITVGVAALR 240 Query: 241 GQWTTAWNLVSAGSILAALPSVILFFVMQKQFVAGLTFGASKG 283 GQWTTAWNLVSAGSILAALPSVILFFVMQKQFVAGLTFGASKG Sbjct: 241 GQWTTAWNLVSAGSILAALPSVILFFVMQKQFVAGLTFGASKG 283 >ref|YP_004750960.1| binding-protein-dependent transport systems inner membrane component [Collimonas fungivorans Ter331] gb|AEK60137.1| binding-protein-dependent transport systems inner membrane component [Collimonas fungivorans Ter331] Length = 283 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 248/283 (87%), Positives = 271/283 (95%) Query: 1 MFPMPIEKWKPINRALYRASLPVALLIWLLPMLTALVTSIRSNDELMAGNYWGWPQDFAM 60 MFPMPIEKWK NR LY+ SLPVALLIWLLP+L LVTS+RS DELM GNYWGWP+DFAM Sbjct: 1 MFPMPIEKWKASNRILYKLSLPVALLIWLLPILAVLVTSVRSTDELMEGNYWGWPKDFAM 60 Query: 61 LENYREALTASPMLHYFWNSCLITIPSVIGAISLAAMAGFALSTYQFRGNTVLFATFVAC 120 L NYREALTASPMLHYFWNSCLITIPSVIGAI+LAAMAG+ALSTY+FRGNT+LFATFVAC Sbjct: 61 LANYREALTASPMLHYFWNSCLITIPSVIGAIALAAMAGYALSTYKFRGNTLLFATFVAC 120 Query: 121 NFVPQQILMIPVRDLSLSLGLFNTITGMMLFHIAMQTGFCTLFLRNFIKQLPFEMIEAAR 180 NFVPQQILMIPVR++S+SLGLFNT++G++LFH+AMQTGFCTLFLRNFIKQLP+EMIEAAR Sbjct: 121 NFVPQQILMIPVREISVSLGLFNTVSGLILFHVAMQTGFCTLFLRNFIKQLPYEMIEAAR 180 Query: 181 IEGASEWTVFYRIVLPLIRPALAALAVLVFTFVWNDYFWALVLTQGDDVAPITVGVAALR 240 IEGA EWTVFYRIVLPLI+PALAALAVLVFTFVWNDYFWAL LTQGDDVAPITVGVAAL+ Sbjct: 181 IEGAGEWTVFYRIVLPLIKPALAALAVLVFTFVWNDYFWALCLTQGDDVAPITVGVAALK 240 Query: 241 GQWTTAWNLVSAGSILAALPSVILFFVMQKQFVAGLTFGASKG 283 GQWTTAWNLVSAGS+LAA+PSV+LFF+MQKQFV GLTFGASKG Sbjct: 241 GQWTTAWNLVSAGSVLAAIPSVLLFFLMQKQFVVGLTFGASKG 283 >ref|YP_001858570.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] gb|ACC71524.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] Length = 283 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 227/283 (80%), Positives = 258/283 (91%) Query: 1 MFPMPIEKWKPINRALYRASLPVALLIWLLPMLTALVTSIRSNDELMAGNYWGWPQDFAM 60 M+PMP+ KWKP+NR LY+ SLPVALLIWLLPM+ LVTS+RS +EL GNYWGWP+ A+ Sbjct: 1 MYPMPVAKWKPVNRRLYKLSLPVALLIWLLPMIAVLVTSVRSTEELSEGNYWGWPKHIAL 60 Query: 61 LENYREALTASPMLHYFWNSCLITIPSVIGAISLAAMAGFALSTYQFRGNTVLFATFVAC 120 ++NYREALT SPMLHYFWNS LIT+PSVIG+I+LAAMAGFAL+ Y+FRGNT LFATFVA Sbjct: 61 IDNYREALTTSPMLHYFWNSVLITVPSVIGSITLAAMAGFALAIYKFRGNTTLFATFVAG 120 Query: 121 NFVPQQILMIPVRDLSLSLGLFNTITGMMLFHIAMQTGFCTLFLRNFIKQLPFEMIEAAR 180 NFVP QILMIPVRDLSLSLG+FNT++ ++LFH+A QTGFC LFLRNFIKQLP+E++EAAR Sbjct: 121 NFVPIQILMIPVRDLSLSLGIFNTLSALVLFHVAFQTGFCALFLRNFIKQLPYELVEAAR 180 Query: 181 IEGASEWTVFYRIVLPLIRPALAALAVLVFTFVWNDYFWALVLTQGDDVAPITVGVAALR 240 IEGA EWTVF+RIVLPLIRPALAALA+LVFTFVWNDYFWAL LTQGD+ APITVGVAAL+ Sbjct: 181 IEGAGEWTVFFRIVLPLIRPALAALAILVFTFVWNDYFWALCLTQGDEAAPITVGVAALK 240 Query: 241 GQWTTAWNLVSAGSILAALPSVILFFVMQKQFVAGLTFGASKG 283 GQWTTAWNLVSAGSILAALPSV +FF MQK FVAGLTFGA+KG Sbjct: 241 GQWTTAWNLVSAGSILAALPSVAMFFAMQKHFVAGLTFGATKG 283 >ref|ZP_03263954.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] gb|EEA04328.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] Length = 283 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 223/283 (78%), Positives = 257/283 (90%) Query: 1 MFPMPIEKWKPINRALYRASLPVALLIWLLPMLTALVTSIRSNDELMAGNYWGWPQDFAM 60 MFP+PI+KWKP R Y+ +LPVAL+IWLLPM+ L+TS+RS +EL GNYWGWP+ FAM Sbjct: 1 MFPIPIDKWKPATRRAYKLTLPVALVIWLLPMIAVLITSVRSTEELSEGNYWGWPKHFAM 60 Query: 61 LENYREALTASPMLHYFWNSCLITIPSVIGAISLAAMAGFALSTYQFRGNTVLFATFVAC 120 +NYREALT SPMLHYFWNS LIT+PSV+G+I+LAAMAGFAL+ Y+FRGN+ LFATFVA Sbjct: 61 FDNYREALTTSPMLHYFWNSVLITVPSVVGSIALAAMAGFALAIYRFRGNSTLFATFVAG 120 Query: 121 NFVPQQILMIPVRDLSLSLGLFNTITGMMLFHIAMQTGFCTLFLRNFIKQLPFEMIEAAR 180 NFVP Q+LMIPVRDLSL LGLFNT++ ++LFH++ QTGFC LFLRNFIKQLPFE++EAAR Sbjct: 121 NFVPIQVLMIPVRDLSLQLGLFNTVSALILFHVSFQTGFCALFLRNFIKQLPFELVEAAR 180 Query: 181 IEGASEWTVFYRIVLPLIRPALAALAVLVFTFVWNDYFWALVLTQGDDVAPITVGVAALR 240 IEGA+EWTVF+RIVLPLIRPALAALA+LVFTFVWNDYFWAL LTQGDD APITVGVAAL+ Sbjct: 181 IEGANEWTVFFRIVLPLIRPALAALAILVFTFVWNDYFWALCLTQGDDAAPITVGVAALK 240 Query: 241 GQWTTAWNLVSAGSILAALPSVILFFVMQKQFVAGLTFGASKG 283 GQWTTAWNLVSAGSILAALPSV++FF MQK FVAGLTFGA+KG Sbjct: 241 GQWTTAWNLVSAGSILAALPSVMMFFAMQKHFVAGLTFGATKG 283 >ref|YP_001888331.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phytofirmans PsJN] gb|ACD18961.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phytofirmans PsJN] Length = 283 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 223/283 (78%), Positives = 257/283 (90%) Query: 1 MFPMPIEKWKPINRALYRASLPVALLIWLLPMLTALVTSIRSNDELMAGNYWGWPQDFAM 60 MFP+PI+KWKP R +Y+ +LPVALLIWLLPM+ LVTS+RS +EL GNYWGWP+ FAM Sbjct: 1 MFPIPIDKWKPATRRMYKLTLPVALLIWLLPMIAVLVTSVRSTEELSEGNYWGWPKHFAM 60 Query: 61 LENYREALTASPMLHYFWNSCLITIPSVIGAISLAAMAGFALSTYQFRGNTVLFATFVAC 120 +NYREALT SPMLHYFWNS LIT+P+V+G+I+LAAMAGFAL+ Y+FRGN+ LFATFVA Sbjct: 61 FDNYREALTTSPMLHYFWNSVLITVPAVVGSIALAAMAGFALAIYRFRGNSTLFATFVAG 120 Query: 121 NFVPQQILMIPVRDLSLSLGLFNTITGMMLFHIAMQTGFCTLFLRNFIKQLPFEMIEAAR 180 NFVP Q+LMIPVRDLSL LGLFNT++ ++LFH++ QTGFC LFLRNFIKQLPFE++EAAR Sbjct: 121 NFVPVQVLMIPVRDLSLQLGLFNTVSALILFHVSFQTGFCALFLRNFIKQLPFELVEAAR 180 Query: 181 IEGASEWTVFYRIVLPLIRPALAALAVLVFTFVWNDYFWALVLTQGDDVAPITVGVAALR 240 IEGA+EWTVF++IVLPLIRPALAALA+LVFTFVWNDYFWAL LTQGDD APITVGVAAL+ Sbjct: 181 IEGANEWTVFFKIVLPLIRPALAALAILVFTFVWNDYFWALCLTQGDDAAPITVGVAALK 240 Query: 241 GQWTTAWNLVSAGSILAALPSVILFFVMQKQFVAGLTFGASKG 283 GQWTTAWNLVSAGSILAALPSV +FF MQK FVAGLTFGA+KG Sbjct: 241 GQWTTAWNLVSAGSILAALPSVAMFFAMQKHFVAGLTFGATKG 283