BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0412.p         (154 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773607.1| leucine-responsive regulatory protein [Herba...   297   4e-79
ref|ZP_08274365.1| putative transcriptional regulator, AsnC fami...   265   1e-69
ref|YP_004755063.1| putative AsnC family transcriptional regulat...   264   3e-69
ref|YP_003450308.1| Lrp/AsnC family transcriptional regulator [A...   196   1e-48
ref|YP_971654.1| AsnC family transcriptional regulator [Acidovor...   196   1e-48

>ref|YP_003773607.1| leucine-responsive regulatory protein [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ61699.1| leucine-responsive regulatory protein [Herbaspirillum seropedicae
           SmR1]
          Length = 154

 Score =  297 bits (760), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 154/154 (100%), Positives = 154/154 (100%)

Query: 1   MAGLDKISKKILAELQNDGRISNVDLAARVNLSPAACLERVRKLQEAGYILGYAAQLNPE 60
           MAGLDKISKKILAELQNDGRISNVDLAARVNLSPAACLERVRKLQEAGYILGYAAQLNPE
Sbjct: 1   MAGLDKISKKILAELQNDGRISNVDLAARVNLSPAACLERVRKLQEAGYILGYAAQLNPE 60

Query: 61  LLDVSLLVFIEVVLDRTTPDVFAEFKKSVQSIPEIMECHMVAGGFDYLVKSRVKDMNAYR 120
           LLDVSLLVFIEVVLDRTTPDVFAEFKKSVQSIPEIMECHMVAGGFDYLVKSRVKDMNAYR
Sbjct: 61  LLDVSLLVFIEVVLDRTTPDVFAEFKKSVQSIPEIMECHMVAGGFDYLVKSRVKDMNAYR 120

Query: 121 EFLGKSLLQLKGVRETHTYAVMEEVKNTIRLPIR 154
           EFLGKSLLQLKGVRETHTYAVMEEVKNTIRLPIR
Sbjct: 121 EFLGKSLLQLKGVRETHTYAVMEEVKNTIRLPIR 154


>ref|ZP_08274365.1| putative transcriptional regulator, AsnC family [Oxalobacteraceae
           bacterium IMCC9480]
 gb|EGF32165.1| putative transcriptional regulator, AsnC family [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 152

 Score =  265 bits (678), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 134/151 (88%), Positives = 143/151 (94%)

Query: 4   LDKISKKILAELQNDGRISNVDLAARVNLSPAACLERVRKLQEAGYILGYAAQLNPELLD 63
           LDKISKKIL ELQNDGRISNV+L+ARVNLSPAACLERVRKLQE GYILGY AQLNP+LLD
Sbjct: 2   LDKISKKILNELQNDGRISNVELSARVNLSPAACLERVRKLQEGGYILGYTAQLNPQLLD 61

Query: 64  VSLLVFIEVVLDRTTPDVFAEFKKSVQSIPEIMECHMVAGGFDYLVKSRVKDMNAYREFL 123
           VSLLVFIEVVLDRTTP+VF  FK+SVQ IPE++ECHMVAGGFDYLVK+RV DMNAYREFL
Sbjct: 62  VSLLVFIEVVLDRTTPEVFDAFKRSVQIIPEVLECHMVAGGFDYLVKARVCDMNAYREFL 121

Query: 124 GKSLLQLKGVRETHTYAVMEEVKNTIRLPIR 154
           GKSLLQLKGVRETHTYAVMEEVKNT +LPIR
Sbjct: 122 GKSLLQLKGVRETHTYAVMEEVKNTTKLPIR 152


>ref|YP_004755063.1| putative AsnC family transcriptional regulator [Collimonas
           fungivorans Ter331]
 gb|AEK64240.1| putative transcriptional regulator, AsnC family [Collimonas
           fungivorans Ter331]
          Length = 152

 Score =  264 bits (675), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 134/151 (88%), Positives = 144/151 (95%)

Query: 4   LDKISKKILAELQNDGRISNVDLAARVNLSPAACLERVRKLQEAGYILGYAAQLNPELLD 63
           LDKISKKILAELQNDGRISNVDL+ARVNLSPAACLERVRKLQEAGYIL Y AQLNP+LLD
Sbjct: 2   LDKISKKILAELQNDGRISNVDLSARVNLSPAACLERVRKLQEAGYILHYTAQLNPQLLD 61

Query: 64  VSLLVFIEVVLDRTTPDVFAEFKKSVQSIPEIMECHMVAGGFDYLVKSRVKDMNAYREFL 123
           V+LLVFIEVVLDRTTP+VF  F +SVQ IPE++ECHMVAGGFDYLVK+RVKDMNAYREFL
Sbjct: 62  VALLVFIEVVLDRTTPEVFEAFSQSVQIIPEVLECHMVAGGFDYLVKARVKDMNAYREFL 121

Query: 124 GKSLLQLKGVRETHTYAVMEEVKNTIRLPIR 154
           GKSLLQLKGVRETHTYAVMEEVK+T +LPIR
Sbjct: 122 GKSLLQLKGVRETHTYAVMEEVKHTTKLPIR 152


>ref|YP_003450308.1| Lrp/AsnC family transcriptional regulator [Azospirillum sp. B510]
 dbj|BAI73764.1| Lrp/AsnC family transcriptional regulator [Azospirillum sp. B510]
          Length = 164

 Score =  196 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 98/150 (65%), Positives = 118/150 (78%)

Query: 4   LDKISKKILAELQNDGRISNVDLAARVNLSPAACLERVRKLQEAGYILGYAAQLNPELLD 63
           LD    KIL ELQ DGR+SNV+LA R+NLSPAACLERV++LQ  G I  Y A L+P  L+
Sbjct: 5   LDPTDIKILRELQEDGRLSNVELARRINLSPAACLERVKRLQADGIIQRYVALLDPHRLE 64

Query: 64  VSLLVFIEVVLDRTTPDVFAEFKKSVQSIPEIMECHMVAGGFDYLVKSRVKDMNAYREFL 123
             +LVF+EVVLDRTTPD F +FK +V  +P+IMECHMVAGGFDYLVK+RV+DMN YR FL
Sbjct: 65  AGMLVFVEVVLDRTTPDNFDDFKATVMRMPQIMECHMVAGGFDYLVKARVRDMNEYRLFL 124

Query: 124 GKSLLQLKGVRETHTYAVMEEVKNTIRLPI 153
           G+ L   +GVRETHTYAVMEEVK+   +P+
Sbjct: 125 GELLSTARGVRETHTYAVMEEVKSVTAIPL 154


>ref|YP_971654.1| AsnC family transcriptional regulator [Acidovorax citrulli AAC00-1]
 gb|ABM33880.1| transcriptional regulator, AsnC family [Acidovorax citrulli
           AAC00-1]
          Length = 170

 Score =  196 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 95/150 (63%), Positives = 119/150 (79%)

Query: 4   LDKISKKILAELQNDGRISNVDLAARVNLSPAACLERVRKLQEAGYILGYAAQLNPELLD 63
           +D++ ++ILA LQ+DGRISN+ LA RV LSP A L RV++L   GYILGY A+LNP+ L 
Sbjct: 14  IDRVDRRILAILQDDGRISNIKLAERVALSPTAVLARVQRLTREGYILGYEARLNPQKLG 73

Query: 64  VSLLVFIEVVLDRTTPDVFAEFKKSVQSIPEIMECHMVAGGFDYLVKSRVKDMNAYREFL 123
             +LVF+EV+LDRTTP+VF +FK +VQ  P IMECHMVAGGFDYL+K+R  DMNAYR+F 
Sbjct: 74  AGMLVFVEVLLDRTTPNVFDQFKAAVQVHPAIMECHMVAGGFDYLLKTRQADMNAYRQFA 133

Query: 124 GKSLLQLKGVRETHTYAVMEEVKNTIRLPI 153
           G+ L QL GVRET TYAVMEEVK++  L +
Sbjct: 134 GEVLWQLPGVRETRTYAVMEEVKHSFHLAL 163