BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0408.p (177 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773605.1| alkylhydroperoxidase AhpD [Herbaspirillum se... 277 5e-73 ref|YP_293294.1| alkylhydroperoxidase AhpD core [Ralstonia eutro... 176 1e-42 ref|YP_001860158.1| alkylhydroperoxidase [Burkholderia phymatum ... 173 1e-41 ref|YP_583755.1| alkylhydroperoxidase AhpD core [Cupriavidus met... 170 1e-40 ref|YP_004591555.1| peroxidase-like protein [Enterobacter aeroge... 169 1e-40 >ref|YP_003773605.1| alkylhydroperoxidase AhpD [Herbaspirillum seropedicae SmR1] gb|ADJ61697.1| alkylhydroperoxidase AhpD protein [Herbaspirillum seropedicae SmR1] Length = 177 Score = 277 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 156/177 (88%), Positives = 165/177 (93%) Query: 1 MSRLNTAPISEASGQAAQLFAAIKSAVGMVPNAYAGIGSLSPVALESALHLDGALRKSSL 60 MSRL AP+SEASGQAAQLFAAIKSAVGMVPNAYAGIG+LSPVALESALHLDGALRKSSL Sbjct: 1 MSRLTIAPLSEASGQAAQLFAAIKSAVGMVPNAYAGIGTLSPVALESALHLDGALRKSSL 60 Query: 61 SAKEIEAIKLAVSEQSGCDYCLAAHSLMGKKAGLSAQAIDGVRHDRPSGDDRLDVLADFA 120 SAKEIEA+KLAVS+Q+GCDYCLAAH+LMG+KAGL AQAI GVRH +PSGDDRLDVLADF Sbjct: 61 SAKEIEAVKLAVSQQAGCDYCLAAHTLMGRKAGLDAQAIQGVRHGQPSGDDRLDVLADFV 120 Query: 121 RRLVATRGTVPADVVERVRAVYSDAQIVDTLLAVTAITFTNLFNRVNDTVLDFPPAP 177 R LV + GTV A VVERVRAVYSDAQIVD LLAVTAITFTNLFNRVNDTVLDFPPAP Sbjct: 121 RGLVGSSGTVAASVVERVRAVYSDAQIVDILLAVTAITFTNLFNRVNDTVLDFPPAP 177 >ref|YP_293294.1| alkylhydroperoxidase AhpD core [Ralstonia eutropha JMP134] gb|AAZ65437.1| Alkylhydroperoxidase AhpD core [Ralstonia eutropha JMP134] Length = 179 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 95/174 (54%), Positives = 125/174 (71%), Gaps = 1/174 (0%) Query: 2 SRLNTAPISEASGQAAQLFAAIKSAVGMVPNAYAGIGSLSPVALESALHLDGALRKSSLS 61 +RL+T P+ +A+GQ A+LF AI+ A+G VPNAYA IGS +P L +AL L+ +LS Sbjct: 3 TRLHTIPVQDATGQTAELFGAIRKAIGKVPNAYATIGSNAPAVLANALQTGQILKNGALS 62 Query: 62 AKEIEAIKLAVSEQSGCDYCLAAHSLMGKKAGLSAQAIDGVRHDRPSGDDRLDVLADFAR 121 A+E+EAI LAVSE +GCDYC+AAH+LMGK AG S Q + +R D ++D L F Sbjct: 63 ARELEAINLAVSEHTGCDYCVAAHTLMGKLAGYSGQQMRQLREGSYPDDVKIDALVRFVL 122 Query: 122 RLVATRGTVPADVVERVRAV-YSDAQIVDTLLAVTAITFTNLFNRVNDTVLDFP 174 LV+TRGTVPA+ V+ VRA Y+D QIV+ + A++AI FTN+ NRVNDT LDFP Sbjct: 123 ELVSTRGTVPAESVQAVRAAGYTDGQIVEIIQAMSAILFTNMVNRVNDTALDFP 176 >ref|YP_001860158.1| alkylhydroperoxidase [Burkholderia phymatum STM815] gb|ACC73112.1| alkylhydroperoxidase like protein, AhpD family [Burkholderia phymatum STM815] Length = 177 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 1/175 (0%) Query: 1 MSRLNTAPISEASGQAAQLFAAIKSAVGMVPNAYAGIGSLSPVALESALHLDGALRKSSL 60 M RLN P++EA+GQAA+LFA IK AVGMVPNAYA IGS SP AL+ L AL K +L Sbjct: 1 MERLNRQPVAEATGQAAELFAGIKRAVGMVPNAYAAIGSNSPAALQIVLATGDALGKGAL 60 Query: 61 SAKEIEAIKLAVSEQSGCDYCLAAHSLMGKKAGLSAQAIDGVRHDRPSGDDRLDVLADFA 120 S KE+EAIKLA+S + CDYCLAAHSL GKK G++A + +R R S D L+ +A FA Sbjct: 61 SRKEVEAIKLAISGVADCDYCLAAHSLAGKKVGIAADDVAALREGRDSADAHLNAIATFA 120 Query: 121 RRLVATRGTVPADVVERVRAV-YSDAQIVDTLLAVTAITFTNLFNRVNDTVLDFP 174 R + ++RGTVPA VV+ V+A YSD QI +TLLA+ ITFTNLFNRVNDTV+DFP Sbjct: 121 RTVFSSRGTVPAAVVDAVKAAGYSDQQITETLLAIADITFTNLFNRVNDTVVDFP 175 >ref|YP_583755.1| alkylhydroperoxidase AhpD core [Cupriavidus metallidurans CH34] gb|ABF08486.1| Alkylhydroperoxidase AhpD core [Cupriavidus metallidurans CH34] Length = 179 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 93/174 (53%), Positives = 124/174 (71%), Gaps = 1/174 (0%) Query: 2 SRLNTAPISEASGQAAQLFAAIKSAVGMVPNAYAGIGSLSPVALESALHLDGALRKSSLS 61 +RL+T + +A+GQ A+LF A++ A+G VPNAYA IGS +P L AL + AL+K +LS Sbjct: 3 TRLHTIAVQDATGQTAELFGALRGAIGKVPNAYATIGSNAPAVLAQALQTNAALKKGNLS 62 Query: 62 AKEIEAIKLAVSEQSGCDYCLAAHSLMGKKAGLSAQAIDGVRHDRPSGDDRLDVLADFAR 121 A+E+EAI L+VSE SGCDYC+AAH+L GK AG + + +R D ++D L FA Sbjct: 63 ARELEAINLSVSEHSGCDYCVAAHTLTGKMAGYTGDQMCQLRRGSYPEDAKIDALTRFAV 122 Query: 122 RLVATRGTVPADVVERVRAV-YSDAQIVDTLLAVTAITFTNLFNRVNDTVLDFP 174 LV+TRGTVPA +E +RA YSD QIV+ + A++AI FTN+ NRVNDT LDFP Sbjct: 123 ELVSTRGTVPAASLEAIRAAGYSDGQIVEAIQAISAILFTNMINRVNDTTLDFP 176 >ref|YP_004591555.1| peroxidase-like protein [Enterobacter aerogenes KCTC 2190] gb|AEG96276.1| uncharacterized peroxidase-related enzyme [Enterobacter aerogenes KCTC 2190] Length = 178 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 98/177 (55%), Positives = 123/177 (69%), Gaps = 1/177 (0%) Query: 1 MSRLNTAPISEASGQAAQLFAAIKSAVGMVPNAYAGIGSLSPVALESALHLDGALRKSSL 60 MSRL +A+G+AA +FA IK A+G VPNAY IG SP AL+ AL + L KSSL Sbjct: 1 MSRLADIREQDATGKAADIFAGIKKAMGKVPNAYLTIGGHSPAALQQALAHNAMLHKSSL 60 Query: 61 SAKEIEAIKLAVSEQSGCDYCLAAHSLMGKKAGLSAQAIDGVRHDRPSGDDRLDVLADFA 120 SA+E+EAI L+VSE +GCDYCLAAH+LM KKAG S + I +R + D RLD L FA Sbjct: 61 SAQELEAINLSVSEATGCDYCLAAHTLMAKKAGFSGEQIHALRRGEYTEDARLDALVKFA 120 Query: 121 RRLVATRGTVP-ADVVERVRAVYSDAQIVDTLLAVTAITFTNLFNRVNDTVLDFPPA 176 + LV T GT+P ADV A +SD Q+++ + AV+AI FTN+ NRVNDTV+DFP A Sbjct: 121 QTLVTTTGTLPEADVAALRHAGFSDQQVIEIISAVSAILFTNMVNRVNDTVVDFPKA 177