BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0404.p (253 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773600.1| dinucleotide-utilizing enzyme protein [Herba... 437 e-121 ref|YP_001354915.1| thiamine biosynthesis protein ThiF [Janthino... 381 e-104 ref|YP_001101209.1| thiazole biosynthesis protein [Herminiimonas... 381 e-104 emb|CAL63088.2| Adenylyltransferase thiF [Herminiimonas arsenico... 380 e-104 ref|YP_004754712.1| molybdopterin and thiamine biosynthesis prot... 378 e-103 >ref|YP_003773600.1| dinucleotide-utilizing enzyme protein [Herbaspirillum seropedicae SmR1] gb|ADJ61692.1| dinucleotide-utilizing enzyme protein [Herbaspirillum seropedicae SmR1] Length = 254 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 224/251 (89%), Positives = 235/251 (93%) Query: 3 MDDQQLLRYSRHILLDEIDIEGQTRLLQGHALVIGAGGLGSPAAMYLASAGVGHITLVDH 62 MDDQQLLRYSRHILLDEIDI+GQTRLLQGHALVIGAGGLGSPAAMYLASAGVG ITLVDH Sbjct: 1 MDDQQLLRYSRHILLDEIDIDGQTRLLQGHALVIGAGGLGSPAAMYLASAGVGRITLVDH 60 Query: 63 DTVDLTNLQRQIMHTTARVGQLKVQSGQQALEEINPDIDIVALAERVSDARLGELVRSAT 122 DTVDLTNLQRQIMHTTARVGQ KV+SG+QALE+INP + + ALAERV RL LV A Sbjct: 61 DTVDLTNLQRQIMHTTARVGQPKVESGRQALEQINPGVQVTALAERVEAERLHALVAQAD 120 Query: 123 VVLDCSDNFATRHAVNRACVAPGVPLVSGAAIRFDGQVSVFDPRQEASPCYACLFPPERE 182 VVLDCSDNFATRHAVNRACVA GVPLVSGAAIRFDGQVSVFDPRQ+ASPCYACLFPPERE Sbjct: 121 VVLDCSDNFATRHAVNRACVAAGVPLVSGAAIRFDGQVSVFDPRQDASPCYACLFPPERE 180 Query: 183 FEEVQCSTMGVFSPLVGIIGTMQAAEAIKLVAGIGRSLAGRLLILDAREMEWTSIGIGRD 242 FEEVQCSTMGVFSPLVGIIGTMQAAEAIKL+AGIGRSLAGRLLILDAREMEWTSI +GRD Sbjct: 181 FEEVQCSTMGVFSPLVGIIGTMQAAEAIKLLAGIGRSLAGRLLILDAREMEWTSITVGRD 240 Query: 243 RECPVCARRHG 253 R+CPVCA+RH Sbjct: 241 RQCPVCAKRHA 251 >ref|YP_001354915.1| thiamine biosynthesis protein ThiF [Janthinobacterium sp. Marseille] gb|ABR89226.1| thiamine biosynthesis protein ThiF [Janthinobacterium sp. Marseille] Length = 250 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 189/250 (75%), Positives = 214/250 (85%) Query: 3 MDDQQLLRYSRHILLDEIDIEGQTRLLQGHALVIGAGGLGSPAAMYLASAGVGHITLVDH 62 M+DQQLLRYSRHILLDEIDIEGQ +LL H L+IGAGGLGSPAA YLASAGVG ITLVD Sbjct: 1 MNDQQLLRYSRHILLDEIDIEGQEKLLAAHVLIIGAGGLGSPAAFYLASAGVGTITLVDD 60 Query: 63 DTVDLTNLQRQIMHTTARVGQLKVQSGQQALEEINPDIDIVALAERVSDARLGELVRSAT 122 DTVDLTNLQRQI+HTT RVGQ K SG+Q LEEINP I +VAL ERVS ARL ELVR+AT Sbjct: 61 DTVDLTNLQRQILHTTQRVGQAKAASGKQTLEEINPTIKVVALQERVSGARLDELVRNAT 120 Query: 123 VVLDCSDNFATRHAVNRACVAPGVPLVSGAAIRFDGQVSVFDPRQEASPCYACLFPPERE 182 VVLDC DNFATRHAVNRACVA VPLVSGAAI+FDGQ+SVFD R E +PCY+CLFP ++E Sbjct: 121 VVLDCCDNFATRHAVNRACVANRVPLVSGAAIKFDGQISVFDRRDEQAPCYSCLFPEDQE 180 Query: 183 FEEVQCSTMGVFSPLVGIIGTMQAAEAIKLVAGIGRSLAGRLLILDAREMEWTSIGIGRD 242 FE+V C TMGVF+PLVGI+G+ QAAEA+KL+ GIG SLAGRLL+LDAR MEW+SI + R+ Sbjct: 181 FEDVNCGTMGVFAPLVGIVGSTQAAEALKLIVGIGESLAGRLLMLDARTMEWSSIKVKRN 240 Query: 243 RECPVCARRH 252 +C VC + H Sbjct: 241 AKCVVCGQAH 250 >ref|YP_001101209.1| thiazole biosynthesis protein [Herminiimonas arsenicoxydans] Length = 263 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 190/250 (76%), Positives = 214/250 (85%) Query: 3 MDDQQLLRYSRHILLDEIDIEGQTRLLQGHALVIGAGGLGSPAAMYLASAGVGHITLVDH 62 M+DQQLLRYSRHILLDEIDIEGQ +LL HAL+IGAGGLGSPAA YLASAG+G ITLVD Sbjct: 14 MNDQQLLRYSRHILLDEIDIEGQEKLLAAHALIIGAGGLGSPAAFYLASAGIGTITLVDD 73 Query: 63 DTVDLTNLQRQIMHTTARVGQLKVQSGQQALEEINPDIDIVALAERVSDARLGELVRSAT 122 DTVDLTNLQRQI+HTT RVGQ KV SGQ+ L EINP I+I+AL ERVS RL ELVR+A+ Sbjct: 74 DTVDLTNLQRQILHTTERVGQAKVVSGQKTLAEINPTIEIIALQERVSGERLDELVRNAS 133 Query: 123 VVLDCSDNFATRHAVNRACVAPGVPLVSGAAIRFDGQVSVFDPRQEASPCYACLFPPERE 182 VVLDC DNFATRHA+NRACVA VPLVSGAAI+FDGQVSVFD R + +PCYACLFP +++ Sbjct: 134 VVLDCCDNFATRHAINRACVANRVPLVSGAAIKFDGQVSVFDTRSDKAPCYACLFPEDQQ 193 Query: 183 FEEVQCSTMGVFSPLVGIIGTMQAAEAIKLVAGIGRSLAGRLLILDAREMEWTSIGIGRD 242 FEEV C TMGVF+PLVGIIG+ QAAEA+KLVAGIG SL GRLL+LDAR MEW+SI I R+ Sbjct: 194 FEEVNCGTMGVFAPLVGIIGSTQAAEALKLVAGIGASLTGRLLLLDARTMEWSSIKIARN 253 Query: 243 RECPVCARRH 252 C VC + H Sbjct: 254 ASCSVCGQAH 263 >emb|CAL63088.2| Adenylyltransferase thiF [Herminiimonas arsenicoxydans] Length = 250 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 190/250 (76%), Positives = 214/250 (85%) Query: 3 MDDQQLLRYSRHILLDEIDIEGQTRLLQGHALVIGAGGLGSPAAMYLASAGVGHITLVDH 62 M+DQQLLRYSRHILLDEIDIEGQ +LL HAL+IGAGGLGSPAA YLASAG+G ITLVD Sbjct: 1 MNDQQLLRYSRHILLDEIDIEGQEKLLAAHALIIGAGGLGSPAAFYLASAGIGTITLVDD 60 Query: 63 DTVDLTNLQRQIMHTTARVGQLKVQSGQQALEEINPDIDIVALAERVSDARLGELVRSAT 122 DTVDLTNLQRQI+HTT RVGQ KV SGQ+ L EINP I+I+AL ERVS RL ELVR+A+ Sbjct: 61 DTVDLTNLQRQILHTTERVGQAKVVSGQKTLAEINPTIEIIALQERVSGERLDELVRNAS 120 Query: 123 VVLDCSDNFATRHAVNRACVAPGVPLVSGAAIRFDGQVSVFDPRQEASPCYACLFPPERE 182 VVLDC DNFATRHA+NRACVA VPLVSGAAI+FDGQVSVFD R + +PCYACLFP +++ Sbjct: 121 VVLDCCDNFATRHAINRACVANRVPLVSGAAIKFDGQVSVFDTRSDKAPCYACLFPEDQQ 180 Query: 183 FEEVQCSTMGVFSPLVGIIGTMQAAEAIKLVAGIGRSLAGRLLILDAREMEWTSIGIGRD 242 FEEV C TMGVF+PLVGIIG+ QAAEA+KLVAGIG SL GRLL+LDAR MEW+SI I R+ Sbjct: 181 FEEVNCGTMGVFAPLVGIIGSTQAAEALKLVAGIGASLTGRLLLLDARTMEWSSIKIARN 240 Query: 243 RECPVCARRH 252 C VC + H Sbjct: 241 ASCSVCGQAH 250 >ref|YP_004754712.1| molybdopterin and thiamine biosynthesis protein [Collimonas fungivorans Ter331] gb|AEK63889.1| Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis [Collimonas fungivorans Ter331] Length = 262 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 186/249 (74%), Positives = 214/249 (85%) Query: 3 MDDQQLLRYSRHILLDEIDIEGQTRLLQGHALVIGAGGLGSPAAMYLASAGVGHITLVDH 62 M+DQQLLRYSRHILLD+IDI GQ + L HAL+IGAGGLGSP AMYLASAGVG ITLVD+ Sbjct: 11 MNDQQLLRYSRHILLDDIDIAGQEKFLAAHALIIGAGGLGSPVAMYLASAGVGRITLVDN 70 Query: 63 DTVDLTNLQRQIMHTTARVGQLKVQSGQQALEEINPDIDIVALAERVSDARLGELVRSAT 122 D+VDLTNLQRQI+HT+ R+GQ KV SG+ AL +INPDI + ALAER ARLGEL+ +A Sbjct: 71 DSVDLTNLQRQILHTSDRIGQAKVASGKTALAQINPDIQVAALAERADQARLGELIGAAD 130 Query: 123 VVLDCSDNFATRHAVNRACVAPGVPLVSGAAIRFDGQVSVFDPRQEASPCYACLFPPERE 182 VV+DCSDNFATR A+N ACVA VPLVSGAAI+FDGQ+SVFD R +SPCYACLFPP+RE Sbjct: 131 VVIDCSDNFATRQAINSACVAHQVPLVSGAAIQFDGQLSVFDARDPSSPCYACLFPPDRE 190 Query: 183 FEEVQCSTMGVFSPLVGIIGTMQAAEAIKLVAGIGRSLAGRLLILDAREMEWTSIGIGRD 242 FEEV CSTMGVF+PLVGIIG+MQAAEA+KL+AGIG SL+G LL+LDAR MEWT IG+ RD Sbjct: 191 FEEVACSTMGVFAPLVGIIGSMQAAEALKLIAGIGTSLSGFLLMLDARSMEWTRIGVARD 250 Query: 243 RECPVCARR 251 CPVC +R Sbjct: 251 ASCPVCGQR 259