BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0397.p (291 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776202.1| hypothetical protein Hsero_2799 [Herbaspiril... 464 e-128 ref|ZP_03697171.1| conserved hypothetical protein [Lutiella nitr... 328 6e-88 ref|YP_003608769.1| hypothetical protein BC1002_5321 [Burkholder... 324 1e-86 ref|YP_367408.1| hypothetical protein Bcep18194_C7720 [Burkholde... 323 2e-86 ref|ZP_03268646.1| conserved hypothetical protein [Burkholderia ... 322 5e-86 >ref|YP_003776202.1| hypothetical protein Hsero_2799 [Herbaspirillum seropedicae SmR1] gb|ADJ64294.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 286 Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 235/286 (82%), Positives = 256/286 (89%) Query: 6 MAHPDLDLTLLRQWLDKTETRHDQISPALAAALAATLDGPRQPGAGASLPPLWHWIYFWS 65 MA PDLDLTLLRQWLDK+ETRHD + PA+A+ALAATLDGPRQP AG LPPLWHWIYFW+ Sbjct: 1 MASPDLDLTLLRQWLDKSETRHDHLHPAMASALAATLDGPRQPLAGEGLPPLWHWIYFWN 60 Query: 66 VCRQSEVGADGHPQRGGFLPPVPLPRRMWAGGRLRFEAPLPIGAQAEKVSRIASVDVKQG 125 CRQSE G DGHP RGGFLPPVPLPRRMWAGGRLRF APLPIG +A K SR+AS+DVKQG Sbjct: 61 ACRQSETGPDGHPLRGGFLPPVPLPRRMWAGGRLRFMAPLPIGMEASKHSRVASIDVKQG 120 Query: 126 RTGALAFVTVQHTIRHQGQLCLSEEHDIVYRDLPQPGAPVVVPKSAPTDARWSRRVEPDP 185 R+GALAFVTV HTI H GQ CL+EEHDIVYRDLPQ GA V K+APTDA WSRR+ PDP Sbjct: 121 RSGALAFVTVHHTISHAGQTCLTEEHDIVYRDLPQAGAAPVPAKAAPTDALWSRRIVPDP 180 Query: 186 VLLFRYSALTFNGHRIHYDRSYVTEVEGYPGLIVHGPLIATLLADLVAREMPQAVMREFN 245 VLLFRYSALTFNGHRIHYDRSYVT VEGYPGLIVHGPLIATLLADL+AR+MPQAV+R F+ Sbjct: 181 VLLFRYSALTFNGHRIHYDRSYVTGVEGYPGLIVHGPLIATLLADLLARQMPQAVLRAFD 240 Query: 246 FRSVGTLFDTEPFTLCGKPAADGKSVALWAQNERGELAMQAEALLD 291 FR+VG+LFDTE FTLCGKP+ADG+ VALWAQNERGELAMQAEA L+ Sbjct: 241 FRAVGSLFDTEAFTLCGKPSADGRRVALWAQNERGELAMQAEATLE 286 >ref|ZP_03697171.1| conserved hypothetical protein [Lutiella nitroferrum 2002] gb|EEG09657.1| conserved hypothetical protein [Lutiella nitroferrum 2002] Length = 284 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 166/281 (59%), Positives = 202/281 (71%), Gaps = 1/281 (0%) Query: 11 LDLTLLRQWLDKTETRHDQISPALAAALAATLD-GPRQPGAGASLPPLWHWIYFWSVCRQ 69 LD+ LRQW+ K+E R D I+ AAL+ATLD P G+ LPPLWHW+YF + R Sbjct: 3 LDIDYLRQWIGKSEGRDDHITLTPIAALSATLDRDDPAPHVGSMLPPLWHWLYFLPLYRH 62 Query: 70 SEVGADGHPQRGGFLPPVPLPRRMWAGGRLRFEAPLPIGAQAEKVSRIASVDVKQGRTGA 129 SE+G DGH +RGGFLPPVPLPRRMWAGGRL+F PL G+ ++S I ++ VK+GRTG Sbjct: 63 SEIGPDGHAKRGGFLPPVPLPRRMWAGGRLQFLRPLRAGSAINRISHIDNLSVKEGRTGP 122 Query: 130 LAFVTVQHTIRHQGQLCLSEEHDIVYRDLPQPGAPVVVPKSAPTDARWSRRVEPDPVLLF 189 L FV V+H I + + EEHDIVYRDL +PG PV P++AP D W R + PD VLLF Sbjct: 123 LVFVQVRHVIADGEGVAIIEEHDIVYRDLAKPGDPVPQPQAAPADHDWLREIHPDDVLLF 182 Query: 190 RYSALTFNGHRIHYDRSYVTEVEGYPGLIVHGPLIATLLADLVAREMPQAVMREFNFRSV 249 RYSALTFNGHRIHYDR YVTEVEGYPGLIVHGPLIATLL DL+ R +P A + F+FR+V Sbjct: 183 RYSALTFNGHRIHYDRRYVTEVEGYPGLIVHGPLIATLLVDLLRRNLPGATLSNFSFRAV 242 Query: 250 GTLFDTEPFTLCGKPAADGKSVALWAQNERGELAMQAEALL 290 +FD PF++CG+ DGK V LWA++ G L M+A A L Sbjct: 243 KPVFDIAPFSVCGRLDPDGKIVKLWAKDAEGWLTMEATATL 283 >ref|YP_003608769.1| hypothetical protein BC1002_5321 [Burkholderia sp. CCGE1002] gb|ADG19258.1| conserved hypothetical protein [Burkholderia sp. CCGE1002] Length = 280 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 168/275 (61%), Positives = 199/275 (72%), Gaps = 3/275 (1%) Query: 16 LRQWLDKTETRHDQISPALAAALAATLDGPRQPGAGASLPPLWHWIYFWSVCRQSEVGAD 75 L WL+K D I+ AALAATLD + +G ++PPLWHW+YF V SEVG D Sbjct: 8 LDDWLNKQAVTEDDITAFPLAALAATLD---REESGNTVPPLWHWLYFLPVAPLSEVGPD 64 Query: 76 GHPQRGGFLPPVPLPRRMWAGGRLRFEAPLPIGAQAEKVSRIASVDVKQGRTGALAFVTV 135 GHP+RGGFLPPVPLPRRMWAGGRL F APL IG A + S IA+++ K GR+G L FVTV Sbjct: 65 GHPKRGGFLPPVPLPRRMWAGGRLTFHAPLKIGEHARRTSTIANIEDKTGRSGRLVFVTV 124 Query: 136 QHTIRHQGQLCLSEEHDIVYRDLPQPGAPVVVPKSAPTDARWSRRVEPDPVLLFRYSALT 195 QHTI G+L L EEHDIVYRD PQ GA P AP W R ++ D V+LFRYSALT Sbjct: 125 QHTIEVDGELKLEEEHDIVYRDAPQQGARPQQPAPAPEGETWRRTIDADAVMLFRYSALT 184 Query: 196 FNGHRIHYDRSYVTEVEGYPGLIVHGPLIATLLADLVAREMPQAVMREFNFRSVGTLFDT 255 FNGHRIHYD YVT+VEGYPGL+VHGPLIATLL DLV RE+PQA ++ F FR++ F Sbjct: 185 FNGHRIHYDHPYVTQVEGYPGLVVHGPLIATLLVDLVRRELPQATLQGFAFRALRPTFAD 244 Query: 256 EPFTLCGKPAADGKSVALWAQNERGELAMQAEALL 290 +PFT+CGKPAADGK++ LWA++ G L M+A A L Sbjct: 245 QPFTVCGKPAADGKTIDLWAKDHEGYLTMRATAAL 279 >ref|YP_367408.1| hypothetical protein Bcep18194_C7720 [Burkholderia sp. 383] gb|ABB06764.1| conserved hypothetical protein [Burkholderia sp. 383] Length = 286 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 172/275 (62%), Positives = 198/275 (72%), Gaps = 3/275 (1%) Query: 16 LRQWLDKTETRHDQISPALAAALAATLDGPRQPGAGASLPPLWHWIYFWSVCRQSEVGAD 75 L WL KTET D I+ ALAATLD +P G +PP+WHW+YF V +EVG D Sbjct: 14 LDAWLGKTETLDDDITAFPLNALAATLD---RPSPGDVVPPMWHWLYFLPVAPLAEVGPD 70 Query: 76 GHPQRGGFLPPVPLPRRMWAGGRLRFEAPLPIGAQAEKVSRIASVDVKQGRTGALAFVTV 135 GHP+RGGFLPPVPLPRRMWAGGRL F APL G +A + S I +++ K GR+G L FVTV Sbjct: 71 GHPKRGGFLPPVPLPRRMWAGGRLTFHAPLRTGRRATRESTIENIEDKTGRSGRLVFVTV 130 Query: 136 QHTIRHQGQLCLSEEHDIVYRDLPQPGAPVVVPKSAPTDARWSRRVEPDPVLLFRYSALT 195 QH I G LC+ EEHDIVYRD PQPG+P P +AP WSR V D V+LFRYSALT Sbjct: 131 QHRIECDGALCVEEEHDIVYRDAPQPGSPAPKPVAAPAGETWSRTVTADAVMLFRYSALT 190 Query: 196 FNGHRIHYDRSYVTEVEGYPGLIVHGPLIATLLADLVAREMPQAVMREFNFRSVGTLFDT 255 FNGHRIHYDRSYVT+ EGYPGL+VHGPLIATLL DLV RE P A + F FR+V FD Sbjct: 191 FNGHRIHYDRSYVTQEEGYPGLVVHGPLIATLLVDLVHRERPDATLASFAFRAVRPTFDG 250 Query: 256 EPFTLCGKPAADGKSVALWAQNERGELAMQAEALL 290 EPFTLCGKP+ DGK++ LWA++ G L MQA A L Sbjct: 251 EPFTLCGKPSDDGKTIELWAKDRDGWLTMQATATL 285 >ref|ZP_03268646.1| conserved hypothetical protein [Burkholderia sp. H160] gb|EDZ99753.1| conserved hypothetical protein [Burkholderia sp. H160] Length = 280 Score = 322 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 165/275 (60%), Positives = 198/275 (72%), Gaps = 3/275 (1%) Query: 16 LRQWLDKTETRHDQISPALAAALAATLDGPRQPGAGASLPPLWHWIYFWSVCRQSEVGAD 75 L WL+K D I+ ALAATLD + +G ++PPLWHW+YF V SEVG D Sbjct: 8 LDDWLNKQAVVKDDITAFPLTALAATLD---REESGNTVPPLWHWLYFLPVAPLSEVGPD 64 Query: 76 GHPQRGGFLPPVPLPRRMWAGGRLRFEAPLPIGAQAEKVSRIASVDVKQGRTGALAFVTV 135 GHP+RGGFLPPVPLPRRMWAGGRL F APL IG +A++ S IA+++ K GR+G L FVTV Sbjct: 65 GHPKRGGFLPPVPLPRRMWAGGRLTFHAPLKIGERAQRTSTIANIEDKTGRSGRLVFVTV 124 Query: 136 QHTIRHQGQLCLSEEHDIVYRDLPQPGAPVVVPKSAPTDARWSRRVEPDPVLLFRYSALT 195 QHTI G+L L EEHDIVYRD PQ A P AP W R + D V+LFRYSALT Sbjct: 125 QHTIEVDGELKLEEEHDIVYRDAPQESARPQRPAPAPEGETWQRTIVADAVMLFRYSALT 184 Query: 196 FNGHRIHYDRSYVTEVEGYPGLIVHGPLIATLLADLVAREMPQAVMREFNFRSVGTLFDT 255 FNGHRIHYD YVT+VEGYPGL+VHGPLIATLL DLV RE+P A ++ F FR++ +F Sbjct: 185 FNGHRIHYDHPYVTQVEGYPGLVVHGPLIATLLVDLVRRELPHATLQSFAFRALRPIFAD 244 Query: 256 EPFTLCGKPAADGKSVALWAQNERGELAMQAEALL 290 +PFT+CGKPAADGK++ LWA++ G L M+A A L Sbjct: 245 QPFTVCGKPAADGKTIDLWAKDHEGYLTMRATAAL 279