BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0393.p (262 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776206.1| 3-oxoacyl-[acyl-carrier-protein] reductase [... 422 e-116 ref|YP_001630573.1| short-chain dehydrogenase [Bordetella petrii... 360 1e-97 ref|YP_001098900.1| oxidoreductase [Herminiimonas arsenicoxydans... 360 1e-97 ref|ZP_08404314.1| short-chain dehydrogenase [Hylemonella gracil... 357 9e-97 ref|YP_001208262.1| putative short-chain reductase/dehydrogenase... 355 3e-96 >ref|YP_003776206.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Herbaspirillum seropedicae SmR1] gb|ADJ64298.1| 3-oxoacyl-[acyl-carrier-protein] reductase protein [Herbaspirillum seropedicae SmR1] Length = 262 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 240/262 (91%), Positives = 252/262 (96%) Query: 1 MDLGIKGKTALVCASSKGLGRACALSLAREGVHVTLLARGAEALEATAQAIRTETAATGA 60 MDL + GKTALVCASSKGLGRACA SLAREGVHVT+LARG EALEA AQ IR E AATGA Sbjct: 1 MDLRLNGKTALVCASSKGLGRACAHSLAREGVHVTMLARGREALEAAAQEIRAEVAATGA 60 Query: 61 IITTVACDITTPEGRALALAACPAPDILVTNAGGPKPGDFREWTRDDWIAAVDANMLTPI 120 IITTV+CDITTPEGRALALAACPAPDILVTNAGGPKPGDFR+W+R+DWIAAVDANMLTPI Sbjct: 61 IITTVSCDITTPEGRALALAACPAPDILVTNAGGPKPGDFRDWSREDWIAAVDANMLTPI 120 Query: 121 ELIKATVDGMIACGFGRIVNITSSAVRAPIDILGLSNGARSGLTGFVAGLARKTVAHNVT 180 ELIKATVDGMIA FGRIVNITSSAVRAPIDILGLSNGARSGLTGFVAGLARKTVAHNVT Sbjct: 121 ELIKATVDGMIARRFGRIVNITSSAVRAPIDILGLSNGARSGLTGFVAGLARKTVAHNVT 180 Query: 181 INNLLPGPFETDRLRSTATGAAKESGRTVDEVLADRRKLNPAGRFGDPAEFGDACAYLCS 240 INNLLPGPFETDRLR+TA+GAA+ESGR+VDE+LA+RRKLNPAGRFGDPAEFGDACAYLCS Sbjct: 181 INNLLPGPFETDRLRATASGAAQESGRSVDEILAERRKLNPAGRFGDPAEFGDACAYLCS 240 Query: 241 AQAGFITGQNLLMDGGAYPGTF 262 AQAGFITGQNLLMDGGAYPGTF Sbjct: 241 AQAGFITGQNLLMDGGAYPGTF 262 >ref|YP_001630573.1| short-chain dehydrogenase [Bordetella petrii DSM 12804] emb|CAP42304.1| probable short-chain dehydrogenase [Bordetella petrii] Length = 259 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 196/262 (74%), Positives = 222/262 (84%), Gaps = 3/262 (1%) Query: 1 MDLGIKGKTALVCASSKGLGRACALSLAREGVHVTLLARGAEALEATAQAIRTETAATGA 60 MDLGI+GK ALVCASSKGLGRACALSLAREG V +LARG EALEA A IR +T GA Sbjct: 1 MDLGIEGKRALVCASSKGLGRACALSLAREGAQVVMLARGREALEAAADDIRQQT---GA 57 Query: 61 IITTVACDITTPEGRALALAACPAPDILVTNAGGPKPGDFREWTRDDWIAAVDANMLTPI 120 + TVA DITTP GRA AL ACP PDILVTNAGGPKPGDFREW+R+DWIAA+DANMLTPI Sbjct: 58 RVVTVAADITTPAGRAAALQACPDPDILVTNAGGPKPGDFREWSREDWIAALDANMLTPI 117 Query: 121 ELIKATVDGMIACGFGRIVNITSSAVRAPIDILGLSNGARSGLTGFVAGLARKTVAHNVT 180 ELI+AT+D MI FGRIVNITS+AV+ PIDILGLSNGAR+GLTGFVAGLAR+ AHNVT Sbjct: 118 ELIRATIDRMIERRFGRIVNITSAAVKMPIDILGLSNGARTGLTGFVAGLARQVAAHNVT 177 Query: 181 INNLLPGPFETDRLRSTATGAAKESGRTVDEVLADRRKLNPAGRFGDPAEFGDACAYLCS 240 INNLLPGPF TDRL TA A+ +GR+V++++A R+ PA RFGDPAEFGDACA+LCS Sbjct: 178 INNLLPGPFATDRLTQTALKTAQNTGRSVEDIMAQRQAGIPARRFGDPAEFGDACAFLCS 237 Query: 241 AQAGFITGQNLLMDGGAYPGTF 262 AQAG++TGQNL++DGG YPGT Sbjct: 238 AQAGYMTGQNLVLDGGLYPGTL 259 >ref|YP_001098900.1| oxidoreductase [Herminiimonas arsenicoxydans] emb|CAL60773.1| putative short chain dehydrogenase/reductase [Herminiimonas arsenicoxydans] Length = 259 Score = 360 bits (923), Expect = 1e-97, Method: Composition-based stats. Identities = 195/262 (74%), Positives = 217/262 (82%), Gaps = 3/262 (1%) Query: 1 MDLGIKGKTALVCASSKGLGRACALSLAREGVHVTLLARGAEALEATAQAIRTETAATGA 60 MDLGIKGKTALVC +S+GLGR CA +LA EGVHVTL+AR E LEATA IR+ + Sbjct: 1 MDLGIKGKTALVCGASRGLGRGCAEALAAEGVHVTLVARNLEVLEATAMDIRSSASG--- 57 Query: 61 IITTVACDITTPEGRALALAACPAPDILVTNAGGPKPGDFREWTRDDWIAAVDANMLTPI 120 +IT VACDITT EGRA AL CP PDILVTNAGGP GDF +WTRDDWIAA+DANMLTPI Sbjct: 58 VITIVACDITTAEGRAQALHICPQPDILVTNAGGPPTGDFHDWTRDDWIAALDANMLTPI 117 Query: 121 ELIKATVDGMIACGFGRIVNITSSAVRAPIDILGLSNGARSGLTGFVAGLARKTVAHNVT 180 ELIKATVDGM+A GFGRI+NITSSAV+API +LGLSNGARSGLTGFVAGLARKTVA NVT Sbjct: 118 ELIKATVDGMMARGFGRIINITSSAVKAPISVLGLSNGARSGLTGFVAGLARKTVAQNVT 177 Query: 181 INNLLPGPFETDRLRSTATGAAKESGRTVDEVLADRRKLNPAGRFGDPAEFGDACAYLCS 240 INNLLPGPFETDRL S + AAK G++VDE+ A R+ NPA RFG EFG CA+LCS Sbjct: 178 INNLLPGPFETDRLHSIFSEAAKSGGKSVDEISAVRKLSNPARRFGTRQEFGATCAFLCS 237 Query: 241 AQAGFITGQNLLMDGGAYPGTF 262 AG+ITGQN+L+DGGAYPGTF Sbjct: 238 QHAGYITGQNILLDGGAYPGTF 259 >ref|ZP_08404314.1| short-chain dehydrogenase [Hylemonella gracilis ATCC 19624] gb|EGI78511.1| short-chain dehydrogenase [Hylemonella gracilis ATCC 19624] Length = 259 Score = 357 bits (917), Expect = 9e-97, Method: Composition-based stats. Identities = 203/262 (77%), Positives = 225/262 (85%), Gaps = 3/262 (1%) Query: 1 MDLGIKGKTALVCASSKGLGRACALSLAREGVHVTLLARGAEALEATAQAIRTETAATGA 60 MDLGI G++ALVCASSKGLGRACA+SLAREG VTL+ARG EAL+ATA IR A+TGA Sbjct: 1 MDLGISGRSALVCASSKGLGRACAISLAREGARVTLVARGEEALQATADFIR---ASTGA 57 Query: 61 IITTVACDITTPEGRALALAACPAPDILVTNAGGPKPGDFREWTRDDWIAAVDANMLTPI 120 ++TVA D+TT GRA LAACP PDILVTNAGGPKPGDFR+W R+ W+AA+DANMLTPI Sbjct: 58 PVSTVAADVTTEAGRAAVLAACPEPDILVTNAGGPKPGDFRDWDREAWLAALDANMLTPI 117 Query: 121 ELIKATVDGMIACGFGRIVNITSSAVRAPIDILGLSNGARSGLTGFVAGLARKTVAHNVT 180 LIKATVD MIA FGRIVNITS AV+APIDILGLSNGARSGLTGFVAGLAR TVAHNVT Sbjct: 118 ALIKATVDTMIARRFGRIVNITSGAVKAPIDILGLSNGARSGLTGFVAGLARVTVAHNVT 177 Query: 181 INNLLPGPFETDRLRSTATGAAKESGRTVDEVLADRRKLNPAGRFGDPAEFGDACAYLCS 240 INNLLPGPF TDRL+ TA A +SG+T++ V+A+R NPA R GDPAEFGDACAYLCS Sbjct: 178 INNLLPGPFVTDRLKETAAQWAAKSGKTIEAVIAERGAANPARRLGDPAEFGDACAYLCS 237 Query: 241 AQAGFITGQNLLMDGGAYPGTF 262 AQAGFITGQNLL+DGG YPGTF Sbjct: 238 AQAGFITGQNLLLDGGHYPGTF 259 >ref|YP_001208262.1| putative short-chain reductase/dehydrogenase 3-oxoacyl-[acyl-carrier-protein] reductase [Bradyrhizobium sp. ORS 278] emb|CAL80047.1| putative short-chain reductase/dehydrogenase; putative 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase) [Bradyrhizobium sp. ORS 278] Length = 260 Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 196/262 (74%), Positives = 222/262 (84%), Gaps = 2/262 (0%) Query: 1 MDLGIKGKTALVCASSKGLGRACALSLAREGVHVTLLARGAEALEATAQAIRTETAATGA 60 MDLGIKG+ A+VCASSKGLGRACA++LA EGV VT+ ARGAEAL TA IR A G Sbjct: 1 MDLGIKGRRAIVCASSKGLGRACAIALANEGVDVTITARGAEALAKTAAEIRA--ANPGI 58 Query: 61 IITTVACDITTPEGRALALAACPAPDILVTNAGGPKPGDFREWTRDDWIAAVDANMLTPI 120 +T V DITTPEGRA L ACP PDIL+ NAGGP PGDFR WTRDDWI A+DANMLTPI Sbjct: 59 TVTEVPGDITTPEGRAAVLKACPDPDILINNAGGPPPGDFRNWTRDDWIKALDANMLTPI 118 Query: 121 ELIKATVDGMIACGFGRIVNITSSAVRAPIDILGLSNGARSGLTGFVAGLARKTVAHNVT 180 ELIKATVDGM+A FGRIVNITS+AV+APIDILGLSNGAR+GLTGFVAGL+RKTV +NVT Sbjct: 119 ELIKATVDGMMARKFGRIVNITSAAVKAPIDILGLSNGARAGLTGFVAGLSRKTVINNVT 178 Query: 181 INNLLPGPFETDRLRSTATGAAKESGRTVDEVLADRRKLNPAGRFGDPAEFGDACAYLCS 240 IN LLPGPFETDRLRSTA G A++ G T +++LADR K NPAGRFGDP EFG ACA+LC+ Sbjct: 179 INALLPGPFETDRLRSTAKGEAEKRGVTPEQILADRAKTNPAGRFGDPEEFGLACAFLCA 238 Query: 241 AQAGFITGQNLLMDGGAYPGTF 262 A+AG+ITGQN+L+DGGA+PGT Sbjct: 239 AKAGYITGQNILLDGGAFPGTL 260