BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0390.p (226 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002259092.1| hypothetical protein RSIPO_04977 [Ralstonia ... 237 1e-60 ref|ZP_00946609.1| Hypothetical protein RRSL_00393 [Ralstonia so... 237 1e-60 ref|YP_004784977.1| hypothetical protein Acife_2563 [Acidithioba... 233 2e-59 gb|EGW61875.1| hypothetical protein DsuiDRAFT_00584 [Dechlorosom... 219 3e-55 ref|YP_004422903.1| conserved hypothetical protein RRSL_00393 [E... 112 4e-23 >ref|YP_002259092.1| hypothetical protein RSIPO_04977 [Ralstonia solanacearum IPO1609] emb|CAQ61021.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609] Length = 282 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 115/224 (51%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 1 MKLAIVSEYMLKNNYATPTEGYLKDKYGHKLNVLYEKTIEIANQYSLHKDEIPKVGTTDH 60 +KLA+V+ +ML NNY TPT LK +GHK++VLYE+ I + YS P + D Sbjct: 58 LKLAVVTHHMLTNNYQTPTTKQLKG-FGHKIDVLYEECIRLKPIYSHPNAVAPTLTANDE 116 Query: 61 KILDFLTTYSTRTRYFNLNELGKPTNDKSPLEEWLKITQSIYREYTAGHIIEKSGMSLMY 120 +L+F++ Y RYFNLNE+ + D+SPL +WL + ++ Y +YT + E+S ++LMY Sbjct: 117 VLLNFISEYGDGARYFNLNEICEAKMDRSPLYKWLDLARATYEDYTPHQVRERSALNLMY 176 Query: 121 KMDREGTGNGFTRILDFDGHPMMLFDIYHRQLIIQKSAPLIIWRIIELFQPIYFLLDELS 180 +MDREG NGFT LD GHPMM+FD HRQ +I+KSAPL++WR+IE+ +PI+FLL ++ Sbjct: 177 RMDREGPPNGFTSHLDEHGHPMMVFDCLHRQYVIEKSAPLVLWRLIEMLRPIHFLLTGMA 236 Query: 181 RMATIYEAENGIKNMVIPHYEDFFFFFLAMKSDIKRRKTWMPLF 224 A+ YEAENGI +MVIPHYEDFF F LA K IKRRK W+ +F Sbjct: 237 HKASEYEAENGISSMVIPHYEDFFPFLLAHKDSIKRRKRWLDIF 280 >ref|ZP_00946609.1| Hypothetical protein RRSL_00393 [Ralstonia solanacearum UW551] gb|EAP70882.1| Hypothetical protein RRSL_00393 [Ralstonia solanacearum UW551] Length = 283 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 115/224 (51%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 1 MKLAIVSEYMLKNNYATPTEGYLKDKYGHKLNVLYEKTIEIANQYSLHKDEIPKVGTTDH 60 +KLA+V+ +ML NNY TPT LK +GHK++VLYE+ I + YS P + D Sbjct: 59 LKLAVVTHHMLTNNYQTPTTKQLKG-FGHKIDVLYEECIRLKPIYSHPNAVAPTLTANDE 117 Query: 61 KILDFLTTYSTRTRYFNLNELGKPTNDKSPLEEWLKITQSIYREYTAGHIIEKSGMSLMY 120 +L+F++ Y RYFNLNE+ + D+SPL +WL + ++ Y +YT + E+S ++LMY Sbjct: 118 VLLNFISEYGDGARYFNLNEICEAKMDRSPLYKWLDLARATYEDYTPHQVRERSALNLMY 177 Query: 121 KMDREGTGNGFTRILDFDGHPMMLFDIYHRQLIIQKSAPLIIWRIIELFQPIYFLLDELS 180 +MDREG NGFT LD GHPMM+FD HRQ +I+KSAPL++WR+IE+ +PI+FLL ++ Sbjct: 178 RMDREGPPNGFTSHLDEHGHPMMVFDCLHRQYVIEKSAPLVLWRLIEMLRPIHFLLTGMA 237 Query: 181 RMATIYEAENGIKNMVIPHYEDFFFFFLAMKSDIKRRKTWMPLF 224 A+ YEAENGI +MVIPHYEDFF F LA K IKRRK W+ +F Sbjct: 238 HKASEYEAENGISSMVIPHYEDFFPFLLAHKDSIKRRKRWLDIF 281 >ref|YP_004784977.1| hypothetical protein Acife_2563 [Acidithiobacillus ferrivorans SS3] gb|AEM48651.1| hypothetical protein Acife_2563 [Acidithiobacillus ferrivorans SS3] Length = 285 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 108/226 (47%), Positives = 158/226 (69%), Gaps = 1/226 (0%) Query: 1 MKLAIVSEYMLKNNYATPTEGYLKDKYGHKLNVLYEKTIEIANQY-SLHKDEIPKVGTTD 59 +KLA+V+ YML NNY PT LK+++GH + LY I++ + Y + +P + D Sbjct: 59 LKLAVVTHYMLSNNYQAPTINQLKEEFGHNIATLYNNCIKLRSSYRGPQQVTMPVLSAED 118 Query: 60 HKILDFLTTYSTRTRYFNLNELGKPTNDKSPLEEWLKITQSIYREYTAGHIIEKSGMSLM 119 ++DF T Y+ +RYFNLNE+ + ++SPL +WL + +S Y +YT + +KS ++LM Sbjct: 119 QALVDFFTEYAMGSRYFNLNEICEAKMNRSPLYKWLDLARSTYEQYTPSQVRQKSAINLM 178 Query: 120 YKMDREGTGNGFTRILDFDGHPMMLFDIYHRQLIIQKSAPLIIWRIIELFQPIYFLLDEL 179 Y MDR+G NGFT LD GHPMM+FD HRQ I++KS+PL IWR+IE+ +PIYFLLD + Sbjct: 179 YSMDRKGLTNGFTSHLDEQGHPMMVFDCLHRQYILEKSSPLAIWRLIEILRPIYFLLDCM 238 Query: 180 SRMATIYEAENGIKNMVIPHYEDFFFFFLAMKSDIKRRKTWMPLFD 225 + A+ YE E+GI +MVIPHYED+F+F LA ++ I+RRK W+ +F+ Sbjct: 239 AHKASEYEVEHGISSMVIPHYEDYFYFLLADRATIRRRKRWLEMFN 284 >gb|EGW61875.1| hypothetical protein DsuiDRAFT_00584 [Dechlorosoma suillum PS] Length = 284 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 100/224 (44%), Positives = 151/224 (67%) Query: 1 MKLAIVSEYMLKNNYATPTEGYLKDKYGHKLNVLYEKTIEIANQYSLHKDEIPKVGTTDH 60 +KLA+V+ YML NNY+TPT L++K+GH + LY++ + + +Y + P + T D Sbjct: 59 LKLAVVTHYMLTNNYSTPTIVQLRNKFGHDVKTLYDECVRLMPEYHPLSTKQPTLDTEDQ 118 Query: 61 KILDFLTTYSTRTRYFNLNELGKPTNDKSPLEEWLKITQSIYREYTAGHIIEKSGMSLMY 120 ++ F T Y+ +RYFNLNE+ + ++SPL++WL I +S+Y +T + +K M L+Y Sbjct: 119 ALIGFFTEYAKDSRYFNLNEVCEAKMNRSPLDKWLDIARSVYELHTPHQVRQKCAMDLLY 178 Query: 121 KMDREGTGNGFTRILDFDGHPMMLFDIYHRQLIIQKSAPLIIWRIIELFQPIYFLLDELS 180 MDR+G N FT L+ GHPM +FD HRQ ++QKSAPL+IWR++E+ +PI+ LL+ ++ Sbjct: 179 SMDRQGPPNSFTYYLNESGHPMTVFDCLHRQYVVQKSAPLVIWRLVEVLRPIHLLLEAMA 238 Query: 181 RMATIYEAENGIKNMVIPHYEDFFFFFLAMKSDIKRRKTWMPLF 224 A+ YE G M IPHYEDFF+F LA K+ IKRR+ W+ +F Sbjct: 239 HKASEYEMSQGKPMMTIPHYEDFFYFLLADKAAIKRRRRWLDIF 282 >ref|YP_004422903.1| conserved hypothetical protein RRSL_00393 [Escherichia coli] gb|ADC31747.1| conserved hypothetical protein RRSL_00393 [Escherichia coli] gb|AEC32451.1| hypothetical protein E001_15 [Escherichia coli] Length = 273 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 3/221 (1%) Query: 2 KLAIVSEYMLKNNYATPTEGYLKDKYGHKLNVLYEKTIEIANQYSLHKDEIPKVGTTDHK 61 K+ V +YM++N+ PT +L+ K GH +++L++ + IA +Y + Sbjct: 54 KIIYVVQYMIENDLNKPTYIHLR-KLGHDISILHQNAVNIAIKYEKRDKGKWVLNDEQSA 112 Query: 62 ILDFLTTYSTRTRYFNLNEL-GKPTNDKSPLEEWLKITQSIYREYTAGHIIEKSGMSLMY 120 IL L+ + TRY+NLN + G PLE+W I + Y +YT+ E+ ++ Sbjct: 113 ILTMLSEFGKETRYYNLNTIIGDKKLMNDPLEQWNYILEYCYWKYTSTTKRERLSQEVIS 172 Query: 121 KMDREGTGNGFTRILDFDGHPMMLFDIYHRQLIIQKSAPLIIWRIIELFQPIYFLLDELS 180 +R GFT DGH M D Y + K +P I W II + QP YFLL L Sbjct: 173 WAERNRL-YGFTNEFGLDGHIMTYVDQYLLNWKVNKISPCIAWEIISMLQPYYFLLMRLR 231 Query: 181 RMATIYEAENGIKNMVIPHYEDFFFFFLAMKSDIKRRKTWM 221 + E + GIK+ ++P++ + F +FL ++ KRR+ W+ Sbjct: 232 DTVQLMEQDKGIKDPLVPYFHEIFPYFLLDRATAKRRRNWL 272