BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0388.p         (86 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773595.1| glutaredoxin 3 protein [Herbaspirillum serop...   161   4e-38
ref|YP_001101204.1| glutaredoxin 3 [Herminiimonas arsenicoxydans...   135   3e-30
ref|YP_001354910.1| glutaredoxin 3 [Janthinobacterium sp. Marsei...   134   5e-30
ref|YP_002796826.1| Grx3 [Laribacter hongkongensis HLHK9] >gi|22...   132   2e-29
ref|YP_004754707.1| glutaredoxin 3 [Collimonas fungivorans Ter33...   130   5e-29

>ref|YP_003773595.1| glutaredoxin 3 protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ61687.1| glutaredoxin 3 protein [Herbaspirillum seropedicae SmR1]
          Length = 86

 Score =  161 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 83/86 (96%), Positives = 85/86 (98%)

Query: 1  MSAPVTMYCTAVCPYCMMAERLLASKGITQIEKIRVDLEPQQRELMMQKTGRRTVPQIYV 60
          MSAPV MYCTAVCPYCMMAERLLASKGITQIEKIRVDL+PQQRELMMQ+TGRRTVPQIYV
Sbjct: 1  MSAPVKMYCTAVCPYCMMAERLLASKGITQIEKIRVDLDPQQRELMMQQTGRRTVPQIYV 60

Query: 61 GDTHVGGFDDLSALDRAGKLDPLLQA 86
          GDTHVGGFDDLSALDRAGKLDPLLQA
Sbjct: 61 GDTHVGGFDDLSALDRAGKLDPLLQA 86


>ref|YP_001101204.1| glutaredoxin 3 [Herminiimonas arsenicoxydans]
 emb|CAL63083.1| Glutaredoxin-3 (Grx3) [Herminiimonas arsenicoxydans]
          Length = 87

 Score =  135 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 65/86 (75%), Positives = 73/86 (84%)

Query: 1  MSAPVTMYCTAVCPYCMMAERLLASKGITQIEKIRVDLEPQQRELMMQKTGRRTVPQIYV 60
          M+A V MY + VCPYC MAERLL +KGI+ IEKIR+DL+P QR  MMQKTGRRTVPQIYV
Sbjct: 1  MTAHVVMYSSGVCPYCTMAERLLTAKGISNIEKIRIDLDPAQRAAMMQKTGRRTVPQIYV 60

Query: 61 GDTHVGGFDDLSALDRAGKLDPLLQA 86
          GDTHVGGFDDL+AL+R GKLD LLQ 
Sbjct: 61 GDTHVGGFDDLNALERLGKLDALLQG 86


>ref|YP_001354910.1| glutaredoxin 3 [Janthinobacterium sp. Marseille]
 gb|ABR91801.1| glutaredoxin 3 [Janthinobacterium sp. Marseille]
          Length = 87

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 65/86 (75%), Positives = 73/86 (84%)

Query: 1  MSAPVTMYCTAVCPYCMMAERLLASKGITQIEKIRVDLEPQQRELMMQKTGRRTVPQIYV 60
          M+A V MY T VCPYC MAERLL +KGI  IEKIR+DL+P QR  MM+KTGRRTVPQIYV
Sbjct: 1  MTAHVVMYSTGVCPYCTMAERLLTAKGIANIEKIRIDLDPAQRVAMMEKTGRRTVPQIYV 60

Query: 61 GDTHVGGFDDLSALDRAGKLDPLLQA 86
          GDTHVGGFDDL+AL+R GKLD LLQ+
Sbjct: 61 GDTHVGGFDDLNALERQGKLDALLQS 86


>ref|YP_002796826.1| Grx3 [Laribacter hongkongensis HLHK9]
 gb|ACO75817.1| Grx3 [Laribacter hongkongensis HLHK9]
          Length = 85

 Score =  132 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/81 (77%), Positives = 73/81 (90%)

Query: 4  PVTMYCTAVCPYCMMAERLLASKGITQIEKIRVDLEPQQRELMMQKTGRRTVPQIYVGDT 63
          PVT+Y TA CPYC MAERLLASKG+T + KIRVDL+P +R+ MM++TGRRTVPQIYVGDT
Sbjct: 3  PVTLYTTAFCPYCQMAERLLASKGVTDLTKIRVDLDPDERQRMMERTGRRTVPQIYVGDT 62

Query: 64 HVGGFDDLSALDRAGKLDPLL 84
          HVGG+DDL+ALDRAGKLD LL
Sbjct: 63 HVGGYDDLAALDRAGKLDALL 83


>ref|YP_004754707.1| glutaredoxin 3 [Collimonas fungivorans Ter331]
 gb|AEK63884.1| Glutaredoxin 3 [Collimonas fungivorans Ter331]
          Length = 87

 Score =  130 bits (328), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 63/86 (73%), Positives = 74/86 (86%)

Query: 1  MSAPVTMYCTAVCPYCMMAERLLASKGITQIEKIRVDLEPQQRELMMQKTGRRTVPQIYV 60
          M+A V MY TAVCPYC+ AE+LL +KG+  IEKIR+DL+P QR+ MMQKTGRRTVPQIY+
Sbjct: 1  MTAHVVMYSTAVCPYCIRAEQLLKAKGVEDIEKIRIDLDPAQRDTMMQKTGRRTVPQIYI 60

Query: 61 GDTHVGGFDDLSALDRAGKLDPLLQA 86
          G THVGGFDDL ALDR GKL+PLLQ+
Sbjct: 61 GATHVGGFDDLHALDRDGKLEPLLQS 86