BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0386.p         (149 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773593.1| hypothetical protein Hsero_0159 [Herbaspiril...   266   5e-70
ref|ZP_08272613.1| hypothetical protein IMCC9480_3834 [Oxalobact...   178   2e-43
ref|YP_004754705.1| hypothetical protein CFU_4060 [Collimonas fu...   178   3e-43
ref|YP_001354908.1| hypothetical protein mma_3218 [Janthinobacte...   165   2e-39
ref|YP_001101202.1| hypothetical protein HEAR2971 [Herminiimonas...   154   5e-36

>ref|YP_003773593.1| hypothetical protein Hsero_0159 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61685.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 149

 Score =  266 bits (681), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 138/149 (92%), Positives = 145/149 (97%)

Query: 1   MKRLPLILCATLLGAFMAKDALALDFKSVGASPAIMYDAPSEKGRRVYVAPRGMPVEVVL 60
           M RLPLIL ATLLGAF+AKDALALDFKSVGA+PAIMYDAPSEKGRRVYVAPRGMPVEVVL
Sbjct: 1   MTRLPLILSATLLGAFLAKDALALDFKSVGAAPAIMYDAPSEKGRRVYVAPRGMPVEVVL 60

Query: 61  TYGDWSKVRDAAGTLSWISSKALTPKRMLVVSVANARIFNAADEGSPVVFTADKSVLLEM 120
           TYG+WSKVRDAAGTLSW+SSKALTPKRMLVVS ANAR++NAADE SPVVFTADKSVLLEM
Sbjct: 61  TYGEWSKVRDAAGTLSWVSSKALTPKRMLVVSAANARVYNAADESSPVVFTADKSVLLEM 120

Query: 121 LESPNNGWVKVRHRDGQSGFVKAGDVWGD 149
           LESPNNGWVKVRHRDGQ+GFVKAGDVWGD
Sbjct: 121 LESPNNGWVKVRHRDGQTGFVKAGDVWGD 149


>ref|ZP_08272613.1| hypothetical protein IMCC9480_3834 [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF33908.1| hypothetical protein IMCC9480_3834 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 149

 Score =  178 bits (452), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 89/149 (59%), Positives = 112/149 (75%)

Query: 1   MKRLPLILCATLLGAFMAKDALALDFKSVGASPAIMYDAPSEKGRRVYVAPRGMPVEVVL 60
           MK + L   A LL       A ALD++S+GA+PA++YDAPS++GR+V+VAPR MPVEV+L
Sbjct: 1   MKSVRLHGVAALLSLSAFGHAYALDYQSIGAAPAVLYDAPSQRGRKVFVAPRNMPVEVIL 60

Query: 61  TYGDWSKVRDAAGTLSWISSKALTPKRMLVVSVANARIFNAADEGSPVVFTADKSVLLEM 120
           TYG+WSKVRDA+G LSW+ SK L  KR ++   A  R+  AADE +PV+F+ DKSV+LEM
Sbjct: 61  TYGEWSKVRDASGDLSWVESKQLDAKRHVITKAAGTRVRAAADEMAPVIFSVDKSVILEM 120

Query: 121 LESPNNGWVKVRHRDGQSGFVKAGDVWGD 149
            E    GWVKVRHRDGQ GFVKA DVWG+
Sbjct: 121 AEPSTAGWVKVRHRDGQGGFVKATDVWGE 149


>ref|YP_004754705.1| hypothetical protein CFU_4060 [Collimonas fungivorans Ter331]
 gb|AEK63882.1| conserved hypothetical protein [Collimonas fungivorans Ter331]
          Length = 152

 Score =  178 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 94/143 (65%), Positives = 116/143 (81%), Gaps = 2/143 (1%)

Query: 7   ILCATLLGAFMAKDALALDFKSVGASPAIMYDAPSEKGRRVYVAPRGMPVEVVLTYGDWS 66
           +L A+LLG  +A  A ALDFK+VGA+P ++YDAPSEKGRRV VAPRGMPVEVVLTYG+W+
Sbjct: 12  LLSASLLG--VAGSAHALDFKTVGAAPVVLYDAPSEKGRRVAVAPRGMPVEVVLTYGEWT 69

Query: 67  KVRDAAGTLSWISSKALTPKRMLVVSVANARIFNAADEGSPVVFTADKSVLLEMLESPNN 126
           KVRDA+G LSW+ SK L  KR L VS+ANA+I    D+ + VVFTADK VLLE+++   +
Sbjct: 70  KVRDASGDLSWLQSKGLVAKRNLQVSIANAKIRANPDDAAAVVFTADKGVLLELVDPVAS 129

Query: 127 GWVKVRHRDGQSGFVKAGDVWGD 149
           GW KVRHRDGQ+G+VKA +VWGD
Sbjct: 130 GWAKVRHRDGQAGYVKATEVWGD 152


>ref|YP_001354908.1| hypothetical protein mma_3218 [Janthinobacterium sp. Marseille]
 gb|ABR90560.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 149

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 83/143 (58%), Positives = 113/143 (79%), Gaps = 3/143 (2%)

Query: 7   ILCATLLGAFMAKDALALDFKSVGASPAIMYDAPSEKGRRVYVAPRGMPVEVVLTYGDWS 66
           +L  T+LGA  A    A+++KSVG +PA++Y+AP+EKGR+V+VAPRGMPVEVVLT   WS
Sbjct: 10  VLLLTILGASAAH---AVEYKSVGNNPAVLYNAPTEKGRKVFVAPRGMPVEVVLTQAGWS 66

Query: 67  KVRDAAGTLSWISSKALTPKRMLVVSVANARIFNAADEGSPVVFTADKSVLLEMLESPNN 126
           KVRD AG L+WI +KAL+PKR ++V+VAN ++   A+E S VV TADK VLLE+   P+ 
Sbjct: 67  KVRDVAGDLAWIEAKALSPKRNVIVTVANLKLHTNAEEASAVVATADKGVLLELAAPPSA 126

Query: 127 GWVKVRHRDGQSGFVKAGDVWGD 149
           GWVK++HRDGQ+G+ K+ +VWG+
Sbjct: 127 GWVKLKHRDGQTGYAKSSEVWGE 149


>ref|YP_001101202.1| hypothetical protein HEAR2971 [Herminiimonas arsenicoxydans]
 emb|CAL63081.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 132

 Score =  154 bits (388), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 75/129 (58%), Positives = 100/129 (77%)

Query: 21  ALALDFKSVGASPAIMYDAPSEKGRRVYVAPRGMPVEVVLTYGDWSKVRDAAGTLSWISS 80
           A A +FKSVGA PA++Y+APS++GR+++VAPRGMPVE+VLT   WSKVRDAAG LSW+ +
Sbjct: 4   AHAAEFKSVGAHPAVLYNAPSDRGRKIFVAPRGMPVEIVLTQNGWSKVRDAAGDLSWVET 63

Query: 81  KALTPKRMLVVSVANARIFNAADEGSPVVFTADKSVLLEMLESPNNGWVKVRHRDGQSGF 140
            ALT KR ++ + AN ++  AA+E S VV T DK VLLE++  P +GWVK++HRDG  GF
Sbjct: 64  SALTSKRNVMATTANLKLHAAAEETSAVVATVDKGVLLELVAPPASGWVKLKHRDGPIGF 123

Query: 141 VKAGDVWGD 149
            K  +VWG+
Sbjct: 124 AKTAEVWGE 132