BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0381.p (384 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773589.1| ABC transporter permease [Herbaspirillum ser... 620 e-175 ref|ZP_08274533.1| Cytochrome c-type biogenesis protein CcsA/Res... 545 e-153 ref|YP_001355064.1| cytochrome c assembly family protein [Janthi... 528 e-148 ref|YP_001101362.1| putative transmembrane cytochrome C-type bio... 525 e-147 ref|YP_004751099.1| cytochrome c-type biogenesis protein CcsA/Re... 524 e-146 >ref|YP_003773589.1| ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ61681.1| ABC-type transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 384 Score = 620 bits (1599), Expect = e-175, Method: Composition-based stats. Identities = 367/384 (95%), Positives = 378/384 (98%) Query: 1 MQLTQANQAYEQEQGFFRRLSLVDWIYAAALVAGSLYAFGRFGSYMDYYEKAVLLLAAPT 60 M+LTQ NQAY +EQGFFRRL ++DWIYAAALVAGSLYAFGRFGSYMDYYEKAVLLLAAPT Sbjct: 1 MELTQHNQAYAEEQGFFRRLGVLDWIYAAALVAGSLYAFGRFGSYMDYYEKAVLLLAAPT 60 Query: 61 FAWLGWHWKPVRLLMLVIAVLSLGAIAMYGGALELADKKFFLKYMLSSQSAILWMSALFC 120 FAWLGWHWKPVRLLMLVIAVLSLGAIA+YGGALELADKKFFLKYMLSSQSAILWMSALFC Sbjct: 61 FAWLGWHWKPVRLLMLVIAVLSLGAIALYGGALELADKKFFLKYMLSSQSAILWMSALFC 120 Query: 121 LSTLFYWGGLATTAGTGSAIGSRLCWAAVVLGFTGMMVRWYESYLIGADVGHIPISNLYE 180 LSTLFYWGGLATTAGTG+AIGSRLCWAAVVLGFTG+MVRWYESYLIG DVGHIPISNLYE Sbjct: 121 LSTLFYWGGLATTAGTGNAIGSRLCWAAVVLGFTGLMVRWYESYLIGPDVGHIPISNLYE 180 Query: 181 VFVLFCLITALFYLYYEERYATRQLGAFVLTVITAAVAFLMWYTVSRDAAEIQPLVPALQ 240 VFVLFCLITALFYLYYEERYATRQLGAFVLTVITAAVAFLMWYTVSRDAAEIQPLVPALQ Sbjct: 181 VFVLFCLITALFYLYYEERYATRQLGAFVLTVITAAVAFLMWYTVSRDAAEIQPLVPALQ 240 Query: 241 SWWMKIHVPANFIGYGTFALAAMVAVAYLLRERGILADRLPTLEVLDDVMYKAIAVGFAF 300 SWWMKIHVPANFIGYGTFALAAMVAVAYLLR++G LADRLP+LEVLDDVMYKAIAVGFAF Sbjct: 241 SWWMKIHVPANFIGYGTFALAAMVAVAYLLRQKGYLADRLPSLEVLDDVMYKAIAVGFAF 300 Query: 301 FTIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGRTAAWWALVG 360 FTIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRG+ AAWWALVG Sbjct: 301 FTIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGQAAAWWALVG 360 Query: 361 LLVTTFAFLGVNMFLSGLHSYGEL 384 LLVTTFAFLGVNMFLSGLHSYGEL Sbjct: 361 LLVTTFAFLGVNMFLSGLHSYGEL 384 >ref|ZP_08274533.1| Cytochrome c-type biogenesis protein CcsA/ResC [Oxalobacteraceae bacterium IMCC9480] gb|EGF31994.1| Cytochrome c-type biogenesis protein CcsA/ResC [Oxalobacteraceae bacterium IMCC9480] Length = 383 Score = 545 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 311/384 (80%), Positives = 344/384 (89%), Gaps = 1/384 (0%) Query: 1 MQLTQANQAYEQEQGFFRRLSLVDWIYAAALVAGSLYAFGRFGSYMDYYEKAVLLLAAPT 60 MQLTQ + Y GFF++L VDW++A LVAGS YA RFG++MDYYEK +L+LAAP Sbjct: 1 MQLTQ-QRPYAAPTGFFKKLGPVDWLFAVVLVAGSFYALNRFGAFMDYYEKIILVLAAPV 59 Query: 61 FAWLGWHWKPVRLLMLVIAVLSLGAIAMYGGALELADKKFFLKYMLSSQSAILWMSALFC 120 FAWLGW WKP+R LML +AVLSL A+AMYGG L++A+KKFFLKY+LSSQSAILWMS LF Sbjct: 60 FAWLGWQWKPIRPLMLGLAVLSLSAMAMYGGVLDMANKKFFLKYLLSSQSAILWMSVLFF 119 Query: 121 LSTLFYWGGLATTAGTGSAIGSRLCWAAVVLGFTGMMVRWYESYLIGADVGHIPISNLYE 180 LSTLFYWGGL + GSAIGS+LCWAAVV GFTGM+VRWYESYLIG DVGHIP+SNLYE Sbjct: 120 LSTLFYWGGLIARSDFGSAIGSKLCWAAVVFGFTGMLVRWYESYLIGVDVGHIPVSNLYE 179 Query: 181 VFVLFCLITALFYLYYEERYATRQLGAFVLTVITAAVAFLMWYTVSRDAAEIQPLVPALQ 240 VFVLFC+ITALFYLYYE+ Y TRQ+GAFV+ VI+AAV FL+WYTVSRDAAEIQPLVPALQ Sbjct: 180 VFVLFCMITALFYLYYEQHYKTRQMGAFVMLVISAAVGFLLWYTVSRDAAEIQPLVPALQ 239 Query: 241 SWWMKIHVPANFIGYGTFALAAMVAVAYLLRERGILADRLPTLEVLDDVMYKAIAVGFAF 300 SWWMKIHVPANF+GYGTF+LAAMVAVAYLL+ +G L DRLP+LEVLDDVMYKAIAVGF F Sbjct: 240 SWWMKIHVPANFVGYGTFSLAAMVAVAYLLKSKGYLEDRLPSLEVLDDVMYKAIAVGFTF 299 Query: 301 FTIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGRTAAWWALVG 360 FTIATILG LWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGR AAWWALVG Sbjct: 300 FTIATILGGLWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGRFAAWWALVG 359 Query: 361 LLVTTFAFLGVNMFLSGLHSYGEL 384 LL+TTFAFLGVNMFLSGLHSYG+L Sbjct: 360 LLITTFAFLGVNMFLSGLHSYGQL 383 >ref|YP_001355064.1| cytochrome c assembly family protein [Janthinobacterium sp. Marseille] gb|ABR90249.1| cytochrome c assembly family protein [Janthinobacterium sp. Marseille] Length = 383 Score = 528 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 309/377 (81%), Positives = 346/377 (91%) Query: 8 QAYEQEQGFFRRLSLVDWIYAAALVAGSLYAFGRFGSYMDYYEKAVLLLAAPTFAWLGWH 67 Q Y Q GFF+RL+ +DW+Y AAL+A SL+A RFG +MD YE+ +L+LAAPTFAWLGWH Sbjct: 7 QIYTQPPGFFKRLTALDWLYGAALLAASLFALNRFGHHMDIYEEVILVLAAPTFAWLGWH 66 Query: 68 WKPVRLLMLVIAVLSLGAIAMYGGALELADKKFFLKYMLSSQSAILWMSALFCLSTLFYW 127 WK VR LM ++AVLSL AIAMYGGAL +AD+KFFLKY+LSSQSAILWMS LF LST+FYW Sbjct: 67 WKSVRWLMALLAVLSLSAIAMYGGALAMADQKFFLKYLLSSQSAILWMSTLFLLSTVFYW 126 Query: 128 GGLATTAGTGSAIGSRLCWAAVVLGFTGMMVRWYESYLIGADVGHIPISNLYEVFVLFCL 187 GGL T + TG+++GS+LCWAAVV+GFTGM+VRWYESYLIGADVGHIP+SNLYEVF+LFC+ Sbjct: 127 GGLITRSATGASLGSKLCWAAVVMGFTGMLVRWYESYLIGADVGHIPVSNLYEVFILFCM 186 Query: 188 ITALFYLYYEERYATRQLGAFVLTVITAAVAFLMWYTVSRDAAEIQPLVPALQSWWMKIH 247 ITALFYLYYE+ YATRQLG FVL VI+AAV FL+WYTV+RDAAEIQPLVPALQSWWMKIH Sbjct: 187 ITALFYLYYEQVYATRQLGPFVLLVISAAVGFLLWYTVTRDAAEIQPLVPALQSWWMKIH 246 Query: 248 VPANFIGYGTFALAAMVAVAYLLRERGILADRLPTLEVLDDVMYKAIAVGFAFFTIATIL 307 VPANFIGYGTFALAAMVA+AYLL+ G+L DRLP LEVLDDVMYKAIAVGFAFFTIATIL Sbjct: 247 VPANFIGYGTFALAAMVAIAYLLKSHGMLVDRLPALEVLDDVMYKAIAVGFAFFTIATIL 306 Query: 308 GALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGRTAAWWALVGLLVTTFA 367 GALWAAEAWGGYWSWDPKETWALIVWLNYA+WLHMRLMKGLRG+ AAWWA++GLLVTTFA Sbjct: 307 GALWAAEAWGGYWSWDPKETWALIVWLNYASWLHMRLMKGLRGKIAAWWAVIGLLVTTFA 366 Query: 368 FLGVNMFLSGLHSYGEL 384 FLGVNMFLSGLHSYGEL Sbjct: 367 FLGVNMFLSGLHSYGEL 383 >ref|YP_001101362.1| putative transmembrane cytochrome C-type biogenesis transmembrane protein [Herminiimonas arsenicoxydans] emb|CAL63241.1| Putative cytochrome c assembly protein [Herminiimonas arsenicoxydans] Length = 383 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 304/377 (80%), Positives = 345/377 (91%) Query: 8 QAYEQEQGFFRRLSLVDWIYAAALVAGSLYAFGRFGSYMDYYEKAVLLLAAPTFAWLGWH 67 Q Y Q GFF+RLS++DW+Y AL+A SL+A RFG +MD YE+A+L+LAAPTFAWLGW+ Sbjct: 7 QMYTQPPGFFKRLSMIDWLYGLALLAASLFALNRFGHHMDVYEEAILVLAAPTFAWLGWY 66 Query: 68 WKPVRLLMLVIAVLSLGAIAMYGGALELADKKFFLKYMLSSQSAILWMSALFCLSTLFYW 127 WK VR L+ V+AVL+L A++MYGGAL + ++KFFLKY+LSSQSAILWMS LF LSTLFYW Sbjct: 67 WKSVRWLIAVLAVLALSAVSMYGGALAMGEQKFFLKYLLSSQSAILWMSMLFLLSTLFYW 126 Query: 128 GGLATTAGTGSAIGSRLCWAAVVLGFTGMMVRWYESYLIGADVGHIPISNLYEVFVLFCL 187 GGL T + TG +IGS+LCWAAV++GFTGM+VRWYESYLIGADVGHIP+SNLYEVF+LFC+ Sbjct: 127 GGLITRSTTGGSIGSKLCWAAVIMGFTGMLVRWYESYLIGADVGHIPVSNLYEVFILFCM 186 Query: 188 ITALFYLYYEERYATRQLGAFVLTVITAAVAFLMWYTVSRDAAEIQPLVPALQSWWMKIH 247 ITALFYLYYE+ YATRQLG FVL VI+AAV FL+WYTV+R+AA+IQPLVPALQSWWMKIH Sbjct: 187 ITALFYLYYEQIYATRQLGPFVLLVISAAVGFLLWYTVTRNAADIQPLVPALQSWWMKIH 246 Query: 248 VPANFIGYGTFALAAMVAVAYLLRERGILADRLPTLEVLDDVMYKAIAVGFAFFTIATIL 307 VPANFIGYGTF+LAAMVAVAYLL+ GIL DRLP LEVLDDVMYKAIAVGFAFFTIATIL Sbjct: 247 VPANFIGYGTFSLAAMVAVAYLLKSHGILGDRLPALEVLDDVMYKAIAVGFAFFTIATIL 306 Query: 308 GALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGRTAAWWALVGLLVTTFA 367 GALWAAEAWGGYWSWDPKETWALIVWLNYA+WLHMRLMKGLRG+ AAWWA++GLLVTTFA Sbjct: 307 GALWAAEAWGGYWSWDPKETWALIVWLNYASWLHMRLMKGLRGKVAAWWAVIGLLVTTFA 366 Query: 368 FLGVNMFLSGLHSYGEL 384 FLGVNMFLSGLHSYGEL Sbjct: 367 FLGVNMFLSGLHSYGEL 383 >ref|YP_004751099.1| cytochrome c-type biogenesis protein CcsA/ResC [Collimonas fungivorans Ter331] gb|AEK60276.1| Cytochrome c-type biogenesis protein CcsA/ResC [Collimonas fungivorans Ter331] Length = 385 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 310/383 (80%), Positives = 344/383 (89%) Query: 2 QLTQANQAYEQEQGFFRRLSLVDWIYAAALVAGSLYAFGRFGSYMDYYEKAVLLLAAPTF 61 ++ + Q Y F +RLS++DW++A ALVA SL+A R+GS+MDYYEK VLLLAAPTF Sbjct: 3 KMMELTQTYSPPSSFIKRLSVLDWLFAVALVAASLFALNRYGSHMDYYEKGVLLLAAPTF 62 Query: 62 AWLGWHWKPVRLLMLVIAVLSLGAIAMYGGALELADKKFFLKYMLSSQSAILWMSALFCL 121 +WLGWHWK VR LM ++A+LSL AIAMYGG L++A++KFFLKYMLSSQSAILWMS LF L Sbjct: 63 SWLGWHWKSVRWLMALLALLSLSAIAMYGGVLDMANQKFFLKYMLSSQSAILWMSTLFFL 122 Query: 122 STLFYWGGLATTAGTGSAIGSRLCWAAVVLGFTGMMVRWYESYLIGADVGHIPISNLYEV 181 STLF+WGGL T + G++IGS+LCWAAVV+GFTGM+VRWYESYLIGAD+GHIPISNLYEV Sbjct: 123 STLFFWGGLVTRSDFGASIGSKLCWAAVVMGFTGMLVRWYESYLIGADIGHIPISNLYEV 182 Query: 182 FVLFCLITALFYLYYEERYATRQLGAFVLTVITAAVAFLMWYTVSRDAAEIQPLVPALQS 241 FVLF LITALFYLYYE+ Y TRQLGAFVL VI+AAV FL+WY VSRDAAEIQPLVPALQS Sbjct: 183 FVLFSLITALFYLYYEQHYRTRQLGAFVLLVISAAVGFLLWYMVSRDAAEIQPLVPALQS 242 Query: 242 WWMKIHVPANFIGYGTFALAAMVAVAYLLRERGILADRLPTLEVLDDVMYKAIAVGFAFF 301 WWMKIHVPANFIGYGTFAL+AMVAVAYLL+ G L DRLP LEVLDDVMYKAIAVGF FF Sbjct: 243 WWMKIHVPANFIGYGTFALSAMVAVAYLLKSHGYLVDRLPALEVLDDVMYKAIAVGFTFF 302 Query: 302 TIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGRTAAWWALVGL 361 TIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRG+ AAWWAL+GL Sbjct: 303 TIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGQVAAWWALIGL 362 Query: 362 LVTTFAFLGVNMFLSGLHSYGEL 384 LVTTFAFLGVNMFLSGLHSYGEL Sbjct: 363 LVTTFAFLGVNMFLSGLHSYGEL 385