BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0379.p (220 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773587.1| cytochrome c553 protein [Herbaspirillum sero... 373 e-101 ref|ZP_08274535.1| Cytochrome c4 [Oxalobacteraceae bacterium IMC... 283 1e-74 ref|YP_001355066.1| cytochrome c, class I [Janthinobacterium sp.... 280 1e-73 ref|YP_001101364.1| cytochrome c4 [Herminiimonas arsenicoxydans]... 272 2e-71 ref|YP_004751097.1| cytochrome c4 [Collimonas fungivorans Ter331... 271 4e-71 >ref|YP_003773587.1| cytochrome c553 protein [Herbaspirillum seropedicae SmR1] gb|ADJ61679.1| cytochrome c553 protein [Herbaspirillum seropedicae SmR1] Length = 220 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 203/220 (92%), Positives = 214/220 (97%) Query: 1 MNRAFSPLLYTVLAAVLAVSSAAHAADDKKAPIKADPAKGEALYTNGDNARNIVACVSCH 60 MNRAFSPLLY+V AA LAV+S AHAADDKKAP+KADPAKGEALYTNGD+ARNIVACVSCH Sbjct: 1 MNRAFSPLLYSVFAAFLAVASTAHAADDKKAPVKADPAKGEALYTNGDSARNIVACVSCH 60 Query: 61 GAAGNSTITQNPKLSGQHEAYIAKQLLNFRTPDRNNPVMSPLAKALSDEDIHNVAAYLAA 120 GAAGNSTITQNPKL+GQHEAYIAKQLLNFRTPDRNNPVMSP+AKALSDEDIHNVAA+LAA Sbjct: 61 GAAGNSTITQNPKLAGQHEAYIAKQLLNFRTPDRNNPVMSPMAKALSDEDIHNVAAFLAA 120 Query: 121 QAPKPGAAKNKDTIELGKHIWRGGIASKNVPACAGCHSPNGAGIPAQYPRLAGQHQDYTV 180 QAPKPGAAKNKDTI+LGKHIWR GIA+KNVPACAGCHSPNGAGIPAQYPRLAGQHQDYTV Sbjct: 121 QAPKPGAAKNKDTIDLGKHIWRAGIAAKNVPACAGCHSPNGAGIPAQYPRLAGQHQDYTV 180 Query: 181 AQLTNFRGGARTNSAQMTAIADRLSDKEIKAVADYIAGLK 220 AQLTNFRGGARTNS QMT I++RLSDKEIKAVADYIAGLK Sbjct: 181 AQLTNFRGGARTNSVQMTTISERLSDKEIKAVADYIAGLK 220 >ref|ZP_08274535.1| Cytochrome c4 [Oxalobacteraceae bacterium IMCC9480] gb|EGF31996.1| Cytochrome c4 [Oxalobacteraceae bacterium IMCC9480] Length = 219 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 150/220 (68%), Positives = 178/220 (80%), Gaps = 1/220 (0%) Query: 1 MNRAFSPLLYTVLAAVLAVSSAAHAADDKKAPIKADPAKGEALYTNGDNARNIVACVSCH 60 MNR F P + + AVLA+SS A+AA++KK KAD AKGEA+YTNGD RNI ACV+CH Sbjct: 1 MNRVFYPAVKSFCIAVLALSSIAYAAEEKKV-FKADVAKGEAIYTNGDPTRNIPACVACH 59 Query: 61 GAAGNSTITQNPKLSGQHEAYIAKQLLNFRTPDRNNPVMSPLAKALSDEDIHNVAAYLAA 120 GAAGNSTI QNPKL+GQH+AY+ KQL+NF+ PDRNN +MS AKAL+++++ N++AYL A Sbjct: 60 GAAGNSTIVQNPKLAGQHDAYLYKQLMNFKGPDRNNAIMSMTAKALTEDEMKNISAYLGA 119 Query: 121 QAPKPGAAKNKDTIELGKHIWRGGIASKNVPACAGCHSPNGAGIPAQYPRLAGQHQDYTV 180 Q KPGAAKNKDTIE GK+I+RGGI KNVPACA CH PNGAGIP Q+ RL QHQ+YTV Sbjct: 120 QVVKPGAAKNKDTIEAGKNIYRGGIGEKNVPACASCHGPNGAGIPDQFARLGAQHQEYTV 179 Query: 181 AQLTNFRGGARTNSAQMTAIADRLSDKEIKAVADYIAGLK 220 AQL +FR G R NS QMT IA RLSD E++AVADYIAGLK Sbjct: 180 AQLMSFRAGTRKNSTQMTTIAKRLSDDEMQAVADYIAGLK 219 >ref|YP_001355066.1| cytochrome c, class I [Janthinobacterium sp. Marseille] gb|ABR90409.1| cytochrome c, class I [Janthinobacterium sp. Marseille] Length = 219 Score = 280 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 145/220 (65%), Positives = 180/220 (81%), Gaps = 1/220 (0%) Query: 1 MNRAFSPLLYTVLAAVLAVSSAAHAADDKKAPIKADPAKGEALYTNGDNARNIVACVSCH 60 MNR P++ ++ A+LA++S A+A++DKK +KADPAKGEALY GD RN+ AC++CH Sbjct: 1 MNRICIPIVKSLFVALLAIASTANASEDKKV-VKADPAKGEALYNTGDATRNVTACIACH 59 Query: 61 GAAGNSTITQNPKLSGQHEAYIAKQLLNFRTPDRNNPVMSPLAKALSDEDIHNVAAYLAA 120 GAAGNS+I +NPKL+GQH AYI KQL++F+ P RNN +M+P+AK +++EDI NV AYLA Sbjct: 60 GAAGNSSIAENPKLTGQHGAYIHKQLVDFKGPARNNAIMAPIAKGMTEEDIQNVIAYLAK 119 Query: 121 QAPKPGAAKNKDTIELGKHIWRGGIASKNVPACAGCHSPNGAGIPAQYPRLAGQHQDYTV 180 Q P PGAAKNKDT+ELGK I+RGGIA KNVPACA CHS NGAG+PAQYPRLAGQHQ YT Sbjct: 120 QKPSPGAAKNKDTVELGKKIYRGGIAEKNVPACAACHSANGAGLPAQYPRLAGQHQTYTA 179 Query: 181 AQLTNFRGGARTNSAQMTAIADRLSDKEIKAVADYIAGLK 220 AQL NFR G R NS MT +A R+SD+EI+AV+DY+AGLK Sbjct: 180 AQLINFRNGTRKNSEPMTTVAKRMSDEEIQAVSDYVAGLK 219 >ref|YP_001101364.1| cytochrome c4 [Herminiimonas arsenicoxydans] emb|CAL63243.1| Cytochrome c4 [Herminiimonas arsenicoxydans] Length = 221 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 141/222 (63%), Positives = 178/222 (80%), Gaps = 3/222 (1%) Query: 1 MNRAFSPLLYTVLAAVLAVSSAAHAADDKKA--PIKADPAKGEALYTNGDNARNIVACVS 58 MNR P++ ++ A L ++S AHA+++KKA +KADPAKGEALY GD +RN++AC++ Sbjct: 1 MNRVCLPIVKSLFVAFLTLASIAHASEEKKAVKAVKADPAKGEALYNTGDASRNVIACIA 60 Query: 59 CHGAAGNSTITQNPKLSGQHEAYIAKQLLNFRTPDRNNPVMSPLAKALSDEDIHNVAAYL 118 CHGAAGNS+I +NPKLSGQH AYI KQLL+F++ RNN +M P+AK +++EDI N+ AY+ Sbjct: 61 CHGAAGNSSIAENPKLSGQHGAYIHKQLLDFKSGARNNAIMGPIAKGMTEEDIRNLIAYM 120 Query: 119 AAQAPKPGAAKNKDTIELGKHIWRGGIASKNVPACAGCHSPNGAGIPAQYPRLAGQHQDY 178 P PGAA+NKDT+ELGKHI+RGGIA K+VPACA CHS NGAG+PAQ+PRLAGQHQ Y Sbjct: 121 DKSKPTPGAARNKDTVELGKHIFRGGIAEKSVPACAACHSANGAGLPAQFPRLAGQHQTY 180 Query: 179 TVAQLTNFRGGARTNSAQMTAIADRLSDKEIKAVADYIAGLK 220 T AQL FR GAR N QM+ I R+SD+EIKAVADY+AGLK Sbjct: 181 TEAQLIAFRTGAREND-QMSKIVKRMSDEEIKAVADYVAGLK 221 >ref|YP_004751097.1| cytochrome c4 [Collimonas fungivorans Ter331] gb|AEK60274.1| Cytochrome c4 [Collimonas fungivorans Ter331] Length = 216 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 152/216 (70%), Positives = 173/216 (80%), Gaps = 4/216 (1%) Query: 9 LYTVLAAVLAVSSAAHAADDKK----APIKADPAKGEALYTNGDNARNIVACVSCHGAAG 64 + + AVLA SS AHAAD K P KADPAKGEALYTNGD ARNI ACVSCHGAAG Sbjct: 1 MTSFFVAVLAFSSVAHAADAPKTQPAGPAKADPAKGEALYTNGDAARNITACVSCHGAAG 60 Query: 65 NSTITQNPKLSGQHEAYIAKQLLNFRTPDRNNPVMSPLAKALSDEDIHNVAAYLAAQAPK 124 STI+ NPKL GQH AYI KQL NF+ DR+NP+MSPLAK L+D+++ N+AAYL AQ K Sbjct: 61 ASTISANPKLGGQHAAYIHKQLTNFQGADRSNPIMSPLAKLLTDDEMKNIAAYLDAQPAK 120 Query: 125 PGAAKNKDTIELGKHIWRGGIASKNVPACAGCHSPNGAGIPAQYPRLAGQHQDYTVAQLT 184 PGAAK+KD++ LGK I+RGGIA K+VPACAGCHSPNGAGIPAQ+PR+ GQHQDYTV +LT Sbjct: 121 PGAAKDKDSLALGKKIYRGGIAEKSVPACAGCHSPNGAGIPAQFPRIGGQHQDYTVTELT 180 Query: 185 NFRGGARTNSAQMTAIADRLSDKEIKAVADYIAGLK 220 NFR GAR N M IA R+SD EIKAVADYIAGL+ Sbjct: 181 NFRSGARKNGPMMATIAKRMSDDEIKAVADYIAGLR 216