BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0372.p (393 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773580.1| 4-hydroxybutyrate dehydrogenase [Herbaspiril... 691 0.0 ref|YP_004378054.1| 4-hydroxybutyrate dehydrogenase [Pseudomonas... 568 e-160 gb|ADR60638.1| Iron-containing alcohol dehydrogenase [Pseudomona... 546 e-153 ref|YP_001669383.1| iron-containing alcohol dehydrogenase [Pseud... 546 e-153 ref|YP_002005664.1| iron-containing alcohol dehydrogenase [Cupri... 543 e-152 >ref|YP_003773580.1| 4-hydroxybutyrate dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ61672.1| 4-hydroxybutyrate dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 379 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 359/379 (94%), Positives = 370/379 (97%) Query: 15 MALINYITQVQFDYGALALLQQECDRLGIKKPLVVTDPGIRNAGLLDKVLGQLKDGAATV 74 MALINYITQVQFDYGALALLQQECDRLGIKKPLVVTD GIRNAGLLDKVLGQLK+G V Sbjct: 1 MALINYITQVQFDYGALALLQQECDRLGIKKPLVVTDMGIRNAGLLDKVLGQLKEGVGAV 60 Query: 75 VYDQTPPNPNEGAVRAAVALFREHGCDGIVAVGGGSSIDLAKGVAVCGTHEGPLKSFALI 134 VYDQTPPNPNEGAVRAAVALFR+HGCDGIVAVGGGSSIDLAKGVAVCGTHEGPLKSFALI Sbjct: 61 VYDQTPPNPNEGAVRAAVALFRQHGCDGIVAVGGGSSIDLAKGVAVCGTHEGPLKSFALI 120 Query: 135 EGGLANITAKTAPVIAIPTTAGTGSEVGRGAILILDDGRKVGIISPHLVPKLALCDPELT 194 EGGLANITAKTAPVIAIPTTAGTGSEVGRGAILILDDGRKVGIISP+LVPKLA+CDPELT Sbjct: 121 EGGLANITAKTAPVIAIPTTAGTGSEVGRGAILILDDGRKVGIISPYLVPKLAICDPELT 180 Query: 195 LGLPPLMTAATGMDAIAHCLETFMAPAFNPPADGIALDGLWRAWAHIERATREPGDREAR 254 LGLPPLMTAATGMDAIAHCLETFMAP+FNPPADGIALDGLWRAWAHIERATREPGDREAR Sbjct: 181 LGLPPLMTAATGMDAIAHCLETFMAPSFNPPADGIALDGLWRAWAHIERATREPGDREAR 240 Query: 255 LNMMSASMQGAMAFQKGLGCVHSLSHSLGGINPKLHHGTLNAIFLPAIIAFNESAPSMVK 314 LNMMSASMQGAMAFQKGLGCVHSLSHSLGGINP+LHHGTLNAIFLPAIIAFNESA SMVK Sbjct: 241 LNMMSASMQGAMAFQKGLGCVHSLSHSLGGINPRLHHGTLNAIFLPAIIAFNESAASMVK 300 Query: 315 DNKMARMAHAMGLAGGAGIGPAIRDMSRRLGLPAGLRELGVSESLFPQIIKGALADHSHK 374 DNKMARMAHAMGL GA IGPAIR+MSRRLGLPAGL ELGV+ES+FPQII+GALADHSHK Sbjct: 301 DNKMARMAHAMGLGSGAEIGPAIREMSRRLGLPAGLGELGVTESMFPQIIQGALADHSHK 360 Query: 375 TNPREASEQDYLNMLQQSM 393 TNPREASEQDYL+MLQQSM Sbjct: 361 TNPREASEQDYLHMLQQSM 379 >ref|YP_004378054.1| 4-hydroxybutyrate dehydrogenase [Pseudomonas mendocina NK-01] gb|AEB56302.1| 4-hydroxybutyrate dehydrogenase [Pseudomonas mendocina NK-01] Length = 379 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 288/379 (75%), Positives = 327/379 (86%) Query: 15 MALINYITQVQFDYGALALLQQECDRLGIKKPLVVTDPGIRNAGLLDKVLGQLKDGAATV 74 MALINY+TQVQF Y AL L EC R+GI +P +VTD G+R AG++DKVL QL + A Sbjct: 1 MALINYLTQVQFGYDALGQLAAECQRIGITRPFIVTDTGVRAAGIVDKVLAQLAEPAVAE 60 Query: 75 VYDQTPPNPNEGAVRAAVALFREHGCDGIVAVGGGSSIDLAKGVAVCGTHEGPLKSFALI 134 V+DQTPPNPNEG VRAA A +R+ G DGI+AVGGGSSIDLAKGVAVCGTHEGPLK FA+I Sbjct: 61 VFDQTPPNPNEGVVRAAAARYRDGGFDGIIAVGGGSSIDLAKGVAVCGTHEGPLKQFAVI 120 Query: 135 EGGLANITAKTAPVIAIPTTAGTGSEVGRGAILILDDGRKVGIISPHLVPKLALCDPELT 194 EGGL ITA TAPVIAIPTTAGTGSEVGRGAILILDDGRKVG+ISP+L+P+ A+CDPELT Sbjct: 121 EGGLTRITAATAPVIAIPTTAGTGSEVGRGAILILDDGRKVGVISPYLIPRSAICDPELT 180 Query: 195 LGLPPLMTAATGMDAIAHCLETFMAPAFNPPADGIALDGLWRAWAHIERATREPGDREAR 254 LGLP +TAATGMDAIAHCLETFMAPAFNPPADGIALDGLWRAW HIERATR PGDREAR Sbjct: 181 LGLPAQLTAATGMDAIAHCLETFMAPAFNPPADGIALDGLWRAWRHIERATRTPGDREAR 240 Query: 255 LNMMSASMQGAMAFQKGLGCVHSLSHSLGGINPKLHHGTLNAIFLPAIIAFNESAPSMVK 314 LNMMSASMQGA+AFQKGLGCVHSLSH+LGGINP+LHHGTLNA+FLPA+IAFN + S+ Sbjct: 241 LNMMSASMQGALAFQKGLGCVHSLSHALGGINPRLHHGTLNAVFLPAVIAFNAQSDSVRD 300 Query: 315 DNKMARMAHAMGLAGGAGIGPAIRDMSRRLGLPAGLRELGVSESLFPQIIKGALADHSHK 374 + K+ R+A AMGL I PAIR+M+RRLG+P+GL E+GV ESLFP II+GALADHSHK Sbjct: 301 EQKLQRIAQAMGLGSAEEIIPAIREMNRRLGMPSGLAEMGVDESLFPAIIEGALADHSHK 360 Query: 375 TNPREASEQDYLNMLQQSM 393 TNPR AS +DY +L+QS+ Sbjct: 361 TNPRVASAEDYAELLRQSL 379 >gb|ADR60638.1| Iron-containing alcohol dehydrogenase [Pseudomonas putida BIRD-1] Length = 380 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 275/380 (72%), Positives = 323/380 (85%), Gaps = 1/380 (0%) Query: 15 MALINYITQVQFDYGALALLQQECDRLGIKKPLVVTDPGIRNAGLLDKVLGQL-KDGAAT 73 M+LINYITQ+QFD GA+A L EC+R+GI +PL+VTD G+R AG++D L D A Sbjct: 1 MSLINYITQIQFDIGAIACLPAECERIGITRPLIVTDRGVRAAGIVDTALNTFASDTAQL 60 Query: 74 VVYDQTPPNPNEGAVRAAVALFREHGCDGIVAVGGGSSIDLAKGVAVCGTHEGPLKSFAL 133 +YD TPPNPNE AVR AVA+F+ +GCDGI+A+GGGS+IDLAKGVAVC H+GPLK FA+ Sbjct: 61 PIYDGTPPNPNEHAVREAVAMFKAYGCDGIIAIGGGSAIDLAKGVAVCARHDGPLKCFAV 120 Query: 134 IEGGLANITAKTAPVIAIPTTAGTGSEVGRGAILILDDGRKVGIISPHLVPKLALCDPEL 193 IEGGLA IT+ TAPVIA+PTTAGTGSEVGRGAILILDDGRKVG+ISPH+VPK A+CDP L Sbjct: 121 IEGGLARITSATAPVIAVPTTAGTGSEVGRGAILILDDGRKVGVISPHVVPKAAICDPAL 180 Query: 194 TLGLPPLMTAATGMDAIAHCLETFMAPAFNPPADGIALDGLWRAWAHIERATREPGDREA 253 TLGLP +TAATGMDAIAHCLETFMAPAFNPPADGIALDGLWRAW IERATR PG+ + Sbjct: 181 TLGLPAQLTAATGMDAIAHCLETFMAPAFNPPADGIALDGLWRAWRFIERATRAPGNLDG 240 Query: 254 RLNMMSASMQGAMAFQKGLGCVHSLSHSLGGINPKLHHGTLNAIFLPAIIAFNESAPSMV 313 R+NMMSAS+QGA+AFQKGLGCVHSLSH+LGGINP+LHHGTLNAIFLPA+I FN +A ++V Sbjct: 241 RINMMSASLQGALAFQKGLGCVHSLSHALGGINPRLHHGTLNAIFLPAVIRFNRTAETVV 300 Query: 314 KDNKMARMAHAMGLAGGAGIGPAIRDMSRRLGLPAGLRELGVSESLFPQIIKGALADHSH 373 ++KM R+A AMGLA + I AIRDM+R LGLP GL EL VS LFP+I++GALADHSH Sbjct: 301 SEHKMQRIAQAMGLADDSQIEDAIRDMTRSLGLPTGLGELDVSPDLFPRIVQGALADHSH 360 Query: 374 KTNPREASEQDYLNMLQQSM 393 +TNPREAS +DY +L+ SM Sbjct: 361 RTNPREASAEDYQWLLEASM 380 >ref|YP_001669383.1| iron-containing alcohol dehydrogenase [Pseudomonas putida GB-1] gb|ABY99047.1| iron-containing alcohol dehydrogenase [Pseudomonas putida GB-1] Length = 380 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 275/380 (72%), Positives = 323/380 (85%), Gaps = 1/380 (0%) Query: 15 MALINYITQVQFDYGALALLQQECDRLGIKKPLVVTDPGIRNAGLLDKVLGQLKDGAATV 74 M+LINY+TQ+QF+ GA+A L EC+R+GI +PL+VTD G+R AG++D L D A + Sbjct: 1 MSLINYVTQIQFESGAIARLPAECERIGITRPLIVTDRGVRAAGIVDTALNTFGDSTAQL 60 Query: 75 -VYDQTPPNPNEGAVRAAVALFREHGCDGIVAVGGGSSIDLAKGVAVCGTHEGPLKSFAL 133 +YD TPPNPNE AVR AVA+F+E GCDGI+A+GGGS+IDLAKGVAVC H+GPLKSFA+ Sbjct: 61 PIYDGTPPNPNENAVREAVAMFKECGCDGIIAIGGGSAIDLAKGVAVCARHDGPLKSFAV 120 Query: 134 IEGGLANITAKTAPVIAIPTTAGTGSEVGRGAILILDDGRKVGIISPHLVPKLALCDPEL 193 IEGGLA IT TAPVIA+PTTAGTGSEVGRGAILILDDGRKVG+ISPH+VPK A+CDP L Sbjct: 121 IEGGLARITPATAPVIAVPTTAGTGSEVGRGAILILDDGRKVGVISPHVVPKAAICDPAL 180 Query: 194 TLGLPPLMTAATGMDAIAHCLETFMAPAFNPPADGIALDGLWRAWAHIERATREPGDREA 253 TLGLP +TAATGMDAIAHCLETFMAP FNPPADGIALDGLWRAW IE ATREPG+ + Sbjct: 181 TLGLPAQLTAATGMDAIAHCLETFMAPVFNPPADGIALDGLWRAWRFIESATREPGNLDG 240 Query: 254 RLNMMSASMQGAMAFQKGLGCVHSLSHSLGGINPKLHHGTLNAIFLPAIIAFNESAPSMV 313 R+NMMSAS+QGA+AFQKGLGCVHSLSH+LGGINP+LHHGTLNAIFLPA+I FN A +++ Sbjct: 241 RINMMSASLQGALAFQKGLGCVHSLSHALGGINPRLHHGTLNAIFLPAVITFNRQAETVL 300 Query: 314 KDNKMARMAHAMGLAGGAGIGPAIRDMSRRLGLPAGLRELGVSESLFPQIIKGALADHSH 373 ++KM R+A AMGLA + I AIR+M+R LGLP GL ELGVSE LFP+II+GALADHSH Sbjct: 301 DEHKMQRIAQAMGLADDSQIEEAIRNMTRTLGLPTGLGELGVSEDLFPRIIQGALADHSH 360 Query: 374 KTNPREASEQDYLNMLQQSM 393 +TNPREAS +DY +L SM Sbjct: 361 RTNPREASAEDYQGLLAASM 380 >ref|YP_002005664.1| iron-containing alcohol dehydrogenase [Cupriavidus taiwanensis LMG 19424] emb|CAQ69597.1| putative Iron-containing alcohol dehydrogenase [Cupriavidus taiwanensis LMG 19424] Length = 379 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 275/379 (72%), Positives = 325/379 (85%) Query: 15 MALINYITQVQFDYGALALLQQECDRLGIKKPLVVTDPGIRNAGLLDKVLGQLKDGAATV 74 MALI+YITQ+Q D+GA+ LL QEC+R+GI +PLVVTD G++ AG++ +VL QL+ G V Sbjct: 1 MALIHYITQIQIDFGAIGLLAQECERIGITRPLVVTDAGVKAAGIVQRVLEQLRPGCEAV 60 Query: 75 VYDQTPPNPNEGAVRAAVALFREHGCDGIVAVGGGSSIDLAKGVAVCGTHEGPLKSFALI 134 +YD TP NP E A+R A+ L+ E+ CDGI+AVGGGS IDLAKGVAVC TH+GPL+ FA I Sbjct: 61 IYDGTPSNPTEAAMREAMRLYSEYRCDGIIAVGGGSPIDLAKGVAVCATHDGPLRQFAAI 120 Query: 135 EGGLANITAKTAPVIAIPTTAGTGSEVGRGAILILDDGRKVGIISPHLVPKLALCDPELT 194 EGG+A ITA TAPVIAIPTTAGTGSEVGRGA+LILDDGRKVG++SP+LVP++A+CDPELT Sbjct: 121 EGGVARITAATAPVIAIPTTAGTGSEVGRGAVLILDDGRKVGVLSPYLVPRVAICDPELT 180 Query: 195 LGLPPLMTAATGMDAIAHCLETFMAPAFNPPADGIALDGLWRAWAHIERATREPGDREAR 254 LGLPP++TAATGMDAIAHCLETFMAPAFNPPADGIALDGL RAW HIERA R+P DR AR Sbjct: 181 LGLPPMLTAATGMDAIAHCLETFMAPAFNPPADGIALDGLRRAWLHIERARRDPQDRAAR 240 Query: 255 LNMMSASMQGAMAFQKGLGCVHSLSHSLGGINPKLHHGTLNAIFLPAIIAFNESAPSMVK 314 L MMSASMQGA+AFQKGLGCVHSLSH+LGG+ P LHHGTLNA+ LPA+I FN APSM Sbjct: 241 LAMMSASMQGALAFQKGLGCVHSLSHALGGLMPTLHHGTLNAVLLPAVIRFNAGAPSMQA 300 Query: 315 DNKMARMAHAMGLAGGAGIGPAIRDMSRRLGLPAGLRELGVSESLFPQIIKGALADHSHK 374 D+K+AR+A AMGL+ + I PAI DM+RRLGLPAGLRE+GV +LFP++I ALADH HK Sbjct: 301 DDKLARIALAMGLSEASAIAPAITDMNRRLGLPAGLREMGVDPALFPRVIDYALADHCHK 360 Query: 375 TNPREASEQDYLNMLQQSM 393 TNPREAS +DYL +LQ S+ Sbjct: 361 TNPREASAEDYLALLQASL 379