BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0368.p         (117 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002912122.1| hypothetical protein bglu_1g23290 [Burkholde...   105   2e-21

>ref|YP_002912122.1| hypothetical protein bglu_1g23290 [Burkholderia glumae BGR1]
 gb|ACR29418.1| Hypothetical protein bglu_1g23290 [Burkholderia glumae BGR1]
          Length = 328

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/117 (45%), Positives = 72/117 (61%), Gaps = 1/117 (0%)

Query: 1   MDINQTTAELVQREGGICIFDKIAFPLPYNTDAVACKFGLGAELYMVPTDQPLLRQRALE 60
           MD +Q   +L+Q  GG C  D++  P        A KFGLG EL++   D+  L +RAL+
Sbjct: 1   MDPDQVVGDLLQSHGGPCALDRLHLPYANPDSGPAAKFGLGCELFLPSIDRGTLGERALQ 60

Query: 61  FLVDYWKTFPDKVNRFLARDTRRAVKFSGDPRGRIQSDIDL-PPLNGYGAALMGMVD 116
           FL+DY + FP++V++FL RD RRAVKFS D + R+  D    PP +GY  AL G VD
Sbjct: 61  FLLDYHQMFPEQVDKFLPRDARRAVKFSNDLKSRLDHDYHQGPPEHGYSTALFGAVD 117