BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0365.p (359 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002912123.1| hypothetical protein bglu_1g23300 [Burkholde... 478 e-133 ref|ZP_02889289.1| hypothetical protein BamIOP4010DRAFT_1351 [Bu... 477 e-132 ref|ZP_02906716.1| hypothetical protein BamMEX5DRAFT_2070 [Burkh... 380 e-103 ref|YP_004730684.1| hypothetical protein SBG_1841 [Salmonella bo... 308 1e-81 ref|YP_004731537.1| hypothetical protein SBG_2723 [Salmonella bo... 231 2e-58 >ref|YP_002912123.1| hypothetical protein bglu_1g23300 [Burkholderia glumae BGR1] gb|ACR29419.1| Hypothetical protein bglu_1g23300 [Burkholderia glumae BGR1] Length = 349 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 232/360 (64%), Positives = 282/360 (78%), Gaps = 12/360 (3%) Query: 1 MAIAINVNGLSLCHRGSGGVSHNTLPNVCKTPDKGIPLPYQNEAYSRDLAKGTVSVFADG 60 MAI INVNGL+LCHRGSGGVS NTLP+VCKTP G+P+PYQNEAYSRDL KGT SVFADG Sbjct: 1 MAITINVNGLTLCHRGSGGVSDNTLPDVCKTPGNGVPVPYQNEAYSRDLIKGTTSVFADG 60 Query: 61 GHSIAKDGSQFARSVFDEAGSMGGVVSGTHSAETDWISHSFDVFFEGKPACRLTDKLFMN 120 G+ IA GSQF++S+FDEAGSMGGVVSGTH AETDWI+HSFDV FEGK ACRLTDKLFMN Sbjct: 61 GNMIANYGSQFSKSIFDEAGSMGGVVSGTHLAETDWITHSFDVKFEGKAACRLTDKLFMN 120 Query: 121 HRNTVNMAGLKQRDLPKPDQDFFDEICELACECWNTHKIGGPQPLPKGHTFQECMRKKID 180 HRNTVNMAGLKQRDLP+ +QD DE+C +ACEC + LP+G TFQ+C+RKKID Sbjct: 121 HRNTVNMAGLKQRDLPEDEQDLLDELCRMACECLKEWQ----GKLPQGKTFQDCVRKKID 176 Query: 181 DKYYGGPANARNGRYPKPDARMWREVSFDRGNNWEMIGSKSNPGLPSSQYPWADSRRLDI 240 +KYY G +PKPDA+ WRE+ +DRG +W++IGSK NP +P+S Y +SRRLD+ Sbjct: 177 EKYYDGSG------HPKPDAKAWREIPYDRGQDWDLIGSKGNPDIPTSNYIRPNSRRLDV 230 Query: 241 ARIGPDGKVIKIFDVKFGKDPLTDDAAKDYRKIAERHTGSDKNFEKFEVNERCHCDDENP 300 A + +GKV K++D+KFG D L+ A KDYR+IA +HTG NFE+F V+ERC+CDD+ P Sbjct: 231 APV-ENGKVTKLYDMKFGGDELSAAAEKDYREIARKHTGDADNFEEFRVDERCNCDDDWP 289 Query: 301 PQHPVPVTASEPK-KSLLDKFGDVIHSHTGVRLAGGLLVLALIISEATRLFPPRNAIPIP 359 P VPVT P+ K L+DK GD + S TG+RL G L+ +I+SE +RLFPPRNA+PIP Sbjct: 290 PPKTVPVTVPAPQEKGLMDKIGDALFSTTGIRLTGAALLTYVILSEGSRLFPPRNAVPIP 349 >ref|ZP_02889289.1| hypothetical protein BamIOP4010DRAFT_1351 [Burkholderia ambifaria IOP40-10] gb|EDT05138.1| hypothetical protein BamIOP4010DRAFT_1351 [Burkholderia ambifaria IOP40-10] Length = 349 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 233/360 (64%), Positives = 287/360 (79%), Gaps = 12/360 (3%) Query: 1 MAIAINVNGLSLCHRGSGGVSHNTLPNVCKTPDKGIPLPYQNEAYSRDLAKGTVSVFADG 60 MAI INVNGL+LCHRGSGGVS NTLP+VCKTP G+P+PY+NEA+SRDL KGT SVFADG Sbjct: 1 MAITINVNGLTLCHRGSGGVSDNTLPDVCKTPGNGVPVPYRNEAHSRDLVKGTTSVFADG 60 Query: 61 GHSIAKDGSQFARSVFDEAGSMGGVVSGTHSAETDWISHSFDVFFEGKPACRLTDKLFMN 120 G+ IA GSQF++S+FDEAGSMGGVVSGTH AETDWI+HSFDV FEGK ACRLTDKLFMN Sbjct: 61 GNMIANYGSQFSKSIFDEAGSMGGVVSGTHLAETDWITHSFDVKFEGKAACRLTDKLFMN 120 Query: 121 HRNTVNMAGLKQRDLPKPDQDFFDEICELACECWNTHKIGGPQPLPKGHTFQECMRKKID 180 HRNTVNMAGLKQRDLP+ +Q+ DE+C++ACEC N K LP+G T+Q+C+RKKID Sbjct: 121 HRNTVNMAGLKQRDLPEDEQELLDELCKMACECLNEWK----GKLPQGKTYQDCVRKKID 176 Query: 181 DKYYGGPANARNGRYPKPDARMWREVSFDRGNNWEMIGSKSNPGLPSSQYPWADSRRLDI 240 DKYY G NG +PKPDA+ WRE+ +DRG+NW++IGSK NP +P+S Y +SRRLDI Sbjct: 177 DKYYDG-----NG-HPKPDAKAWREIPYDRGSNWDLIGSKGNPDIPTSNYIRPNSRRLDI 230 Query: 241 ARIGPDGKVIKIFDVKFGKDPLTDDAAKDYRKIAERHTGSDKNFEKFEVNERCHCDDENP 300 A + DGKV K++D KF KD LT A +DYR+IA +HTG NFE+F V+ERC+CDD+ P Sbjct: 231 APV-KDGKVTKLYDFKFEKDELTSGARRDYREIARKHTGDADNFEEFRVDERCNCDDDWP 289 Query: 301 PQHPVPVTA-SEPKKSLLDKFGDVIHSHTGVRLAGGLLVLALIISEATRLFPPRNAIPIP 359 P VPVTA + +K L K D ++S TGVRLAGGLL+ +++SE +R++ PRNA+P+P Sbjct: 290 PPKTVPVTAPATQEKGFLGKVSDALYSQTGVRLAGGLLIAYVVVSEVSRVYLPRNAVPLP 349 >ref|ZP_02906716.1| hypothetical protein BamMEX5DRAFT_2070 [Burkholderia ambifaria MEX-5] gb|EDT42133.1| hypothetical protein BamMEX5DRAFT_2070 [Burkholderia ambifaria MEX-5] Length = 271 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 188/282 (66%), Positives = 225/282 (79%), Gaps = 11/282 (3%) Query: 1 MAIAINVNGLSLCHRGSGGVSHNTLPNVCKTPDKGIPLPYQNEAYSRDLAKGTVSVFADG 60 MAI INVNGL+LCHRGSGGVS NTLP+VCKTP G+P+PYQNEA+SRDL KGT SVFADG Sbjct: 1 MAITINVNGLTLCHRGSGGVSDNTLPDVCKTPGNGVPVPYQNEAHSRDLVKGTTSVFADG 60 Query: 61 GHSIAKDGSQFARSVFDEAGSMGGVVSGTHSAETDWISHSFDVFFEGKPACRLTDKLFMN 120 G+ +A GSQF++S+FDEAGSMGGVVSGTH AETDWI+HSFDV FEGK ACRLTDKLFMN Sbjct: 61 GNMVANFGSQFSKSIFDEAGSMGGVVSGTHLAETDWITHSFDVKFEGKAACRLTDKLFMN 120 Query: 121 HRNTVNMAGLKQRDLPKPDQDFFDEICELACECWNTHKIGGPQPLPKGHTFQECMRKKID 180 HRNTVNMAGLKQRDLP+ +QD DE+C++AC+C K LP G T+Q+C+RKKID Sbjct: 121 HRNTVNMAGLKQRDLPEDEQDLLDELCQMACDCLKEWK----GKLPSGKTYQDCVRKKID 176 Query: 181 DKYYGGPANARNGRYPKPDARMWREVSFDRGNNWEMIGSKSNPGLPSSQYPWADSRRLDI 240 DKYY G NG +PKPDA+ WRE+ +DRG W+MIGSK NP +P+S Y +SRRLDI Sbjct: 177 DKYYDG-----NG-HPKPDAKAWREIPYDRGKGWDMIGSKGNPDIPTSNYIRPNSRRLDI 230 Query: 241 ARIGPDGKVIKIFDVKFGKDPLTDDAAKDYRKIAERHTGSDK 282 A + +GKV K+FD KFG D LT +A +DYR+IA++ G + Sbjct: 231 APV-QNGKVNKLFDFKFGPDILTPEAEQDYREIAKKSYGRSR 271 >ref|YP_004730684.1| hypothetical protein SBG_1841 [Salmonella bongori NCTC 12419] emb|CCC30909.1| conserved hypothetical protein [Salmonella bongori NCTC 12419] Length = 354 Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 227/351 (64%), Gaps = 33/351 (9%) Query: 3 IAINVNGLSLCHRGSGGVSHNTLPNVCKTPDKGIPLPYQNEAYSRDLAKGTVSVFADGGH 62 + IN+NGL+LCH+GS G+SHNTLP+VCKTP G+P+ Y+NEA S DL KGTVSVFADGG+ Sbjct: 2 LTININGLTLCHKGSNGISHNTLPDVCKTPPFGVPVAYENEACSADLVKGTVSVFADGGN 61 Query: 63 SIAKDGSQFARSVFDEAGSMGGVVSGTHSAETDWISHSFDVFFEGKPACRLTDKLFMNHR 122 IA GSQFARSVF+E GSMGGV+SGT+ AETDWISHSFDVFFE KPA RLTDKLFMNHR Sbjct: 62 MIANMGSQFARSVFNEPGSMGGVLSGTNKAETDWISHSFDVFFEKKPASRLTDKLFMNHR 121 Query: 123 NTVNMAGLKQRDLPKPDQDFFDEICELACECWNTHKIGGPQPLPKGH--TFQECMRKKID 180 NTVNMAGL Q L D + D IC+ A +C+ TH P+G T+Q+C+ K+ Sbjct: 122 NTVNMAGLCQESL--SDDELDDIICKHALDCYTTHCNNLKSQNPEGEYFTYQKCLEDKLR 179 Query: 181 DKYYGGPANARNGRYPKPDARMWREVSFDRGNNWEMIGSKSNPGLPSSQ-YPWADSRRLD 239 ++ Y NGRYP + ++W EV FD+ E+I S + G PS++ Y RR+D Sbjct: 180 EEAY-------NGRYPSDECKIWTEVHFDKA--LELIYSGTQEGAPSARYYTPKGGRRMD 230 Query: 240 IARIGPDGKVIKIFDVKFGKD-PLTDDAAKDYRKIAERHTGSDKNFEKFEVNERC----- 293 I ++ DGK ++ DVKF D LT D A+DYRK+A++ D ++ F V +RC Sbjct: 231 IIQLNRDGKPRRLIDVKFPTDRDLTPDRARDYRKMAKK---LDSEYDTFNVKKRCPGWPK 287 Query: 294 HCDDENPPQHPVPVTASEPKKSLLDKFGDVIHSHTGVRLAGGLLVLALIIS 344 C +E P + P T E K + ++ + GGL+V+A+I + Sbjct: 288 TCPNEKPQEQPQTETQPEEKSASAAQYA----------ILGGLVVVAVIAT 328 >ref|YP_004731537.1| hypothetical protein SBG_2723 [Salmonella bongori NCTC 12419] emb|CCC31775.1| hypothetical protein SBG_2723 [Salmonella bongori NCTC 12419] Length = 384 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 110/155 (70%), Positives = 126/155 (81%), Gaps = 2/155 (1%) Query: 1 MAIAINVNGLSLCHRGSGGVSHNTLPNVCKTPDKGIPLPYQNEAYSRDLAKGTVSVFADG 60 MAI IN+NGL+LCH+GSGG+SHNTLP+VCKTP G P+PY+NEAYS DL KGT SV AD Sbjct: 1 MAITININGLTLCHKGSGGISHNTLPDVCKTPPFGTPVPYENEAYSADLVKGTTSVSADS 60 Query: 61 GHSIAKDGSQFARSVFDEAGSMGGVVSGTHSAETDWISHSFDVFFEGKPACRLTDKLFMN 120 G+ IA GSQFARSVFDE G+MGG++SGT+ AETDWISHSFDVFFE KPACRLTDKLFMN Sbjct: 61 GNMIAIVGSQFARSVFDEPGAMGGMISGTNMAETDWISHSFDVFFEKKPACRLTDKLFMN 120 Query: 121 HRNTVNMAGLKQRDLPKPDQDFFDEICELACECWN 155 HRNTVNMAGL Q P + +IC+ C+C N Sbjct: 121 HRNTVNMAGLCQN--PLKENVLESKICDAICKCRN 153