BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0358.p (599 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773577.1| thiol:disulfide interchange transmembrane pr... 924 0.0 ref|YP_001355070.1| thiol:disulfide interchange protein [Janthin... 614 e-173 ref|YP_004751090.1| cytochrome c-type biogenesis protein DsbD, p... 610 e-172 ref|YP_001101368.1| thiol:disulfide interchange protein, cytochr... 553 e-155 ref|YP_585429.1| Thiol:disulfide interchange protein (Protein-di... 504 e-140 >ref|YP_003773577.1| thiol:disulfide interchange transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ61669.1| thiol:disulfide interchange transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 600 Score = 924 bits (2389), Expect = 0.0, Method: Composition-based stats. Identities = 505/557 (90%), Positives = 529/557 (94%), Gaps = 1/557 (0%) Query: 4 RTRLTRYPLLIVLALLALLGLLVAKAAKAAEDYLPPEQAFQLTGRMVDAQTLELSYRIAD 63 R L R PLL+ LA+LALLGLL AKAA+AAEDYLPPEQAFQL+GRMVDAQTLELSYRIAD Sbjct: 10 RKPLPRLPLLMWLAVLALLGLLAAKAAQAAEDYLPPEQAFQLSGRMVDAQTLELSYRIAD 69 Query: 64 GYYMYRDRFHFSAEGATLGEPQFPAGKRKYDENFQKEVETYHQSVTARIPVSGAVKDFVI 123 GYYMYRDRFHFSAEGATLGEPQFPAGKRKYDENFQ+EVETYHQSVTAR+PVSGAV FV+ Sbjct: 70 GYYMYRDRFHFSAEGATLGEPQFPAGKRKYDENFQQEVETYHQSVTARVPVSGAVDKFVV 129 Query: 124 SAVSQGCADKGLCYPPMTLKLAMSAQDIGKSVTPVGVNADAPG-AGGSDIDGIAAVLKGG 182 +AVSQGCADKGLCYPPMTLKL MSAQ IG+SV+P G G AGGSDIDGIAAVLKGG Sbjct: 130 AAVSQGCADKGLCYPPMTLKLTMSAQAIGQSVSPAGAEGAVQGSAGGSDIDGIAAVLKGG 189 Query: 183 KLWSILSLFFLLGIGLSFTPCVLPMLPILSSIIVGQQPGAGGGRARSFLLSVDYSLGMAL 242 KLWSILSLFF+LGIGLSFTPCVLPMLPILSSIIVGQQP AGGGR RSFLLSV+YSLGMAL Sbjct: 190 KLWSILSLFFVLGIGLSFTPCVLPMLPILSSIIVGQQPAAGGGRGRSFLLSVNYSLGMAL 249 Query: 243 VYTALGVAAGMLGEGLSAYLQNPWVLGAFAVLMAGLALSMFDLYTLQVPASLQSKLSTAS 302 VYT LGV AGMLGEGLSAYLQNPWVLGAFA+LMAGLALSMFDLYTLQVPASLQSKLSTAS Sbjct: 250 VYTGLGVVAGMLGEGLSAYLQNPWVLGAFALLMAGLALSMFDLYTLQVPASLQSKLSTAS 309 Query: 303 GGGSGKWIGVFLMGAISALIVGPCVAAPLAGALLYISQTGNVVLGGSALFSMALGMSVPL 362 GGGSGKW+GVFLMGAISALIVGPCVAAPLAGALLYISQTGNV+LGGSALF+MA+GMSVPL Sbjct: 310 GGGSGKWLGVFLMGAISALIVGPCVAAPLAGALLYISQTGNVMLGGSALFAMAMGMSVPL 369 Query: 363 LLVGASAGALLPRAGAWMDAVKRFFGVLMLGTALWMVSPVIPSWLQVAGWAALGVGYGAF 422 LL+GASAG LLPRAGAWMDAVKRFFGVLMLGTALWM+SPVIP+WLQVAGWAALGVGYGAF Sbjct: 370 LLIGASAGTLLPRAGAWMDAVKRFFGVLMLGTALWMISPVIPAWLQVAGWAALGVGYGAF 429 Query: 423 LLWTRPAGWMSRALGLVVVTLGLLQLVSVATGGRDPLAPLSHLRGQSAAAQATDFVRIRS 482 LLWTRPAGW++RA GLVVVTLGLLQLVS ATGGRDPLAPLSHLRGQSAAA ATDFVRIRS Sbjct: 430 LLWTRPAGWIARAFGLVVVTLGLLQLVSAATGGRDPLAPLSHLRGQSAAAHATDFVRIRS 489 Query: 483 SAELDAALKENAAGERRPVMLDFYADWCVSCKEMERFTFTDARVKERFGQMLLLQIDVTA 542 SAELDAAL++NAAGERRPVMLDFYADWCVSCKEMERFTFTD RVK RFGQMLLLQIDVTA Sbjct: 490 SAELDAALQQNAAGERRPVMLDFYADWCVSCKEMERFTFTDERVKARFGQMLLLQIDVTA 549 Query: 543 NNADDRAMLKRFNLFGP 559 NNADDRAMLKRFNLFGP Sbjct: 550 NNADDRAMLKRFNLFGP 566 >ref|YP_001355070.1| thiol:disulfide interchange protein [Janthinobacterium sp. Marseille] gb|ABR89642.1| thiol:disulfide interchange protein [Janthinobacterium sp. Marseille] Length = 600 Score = 614 bits (1584), Expect = e-173, Method: Composition-based stats. Identities = 349/558 (62%), Positives = 427/558 (76%), Gaps = 16/558 (2%) Query: 12 LLIVLALLALLGLLVAKAAKAAEDYLPPEQAFQLTGRMVDAQTLELSYRIADGYYMYRDR 71 ++VL +LGLL A AA A E++L PE AFQ + RM DA T+ ++Y IADGYYMYR+R Sbjct: 22 FMLVLGCAFMLGLL-ASAAHADEEFLAPEVAFQFSARMDDAHTIAVTYAIADGYYMYRER 80 Query: 72 FHFSAEGATLGEPQFPAGKRKYDENFQKEVETYHQSVTARIPVSGAVKDFVISAVSQGCA 131 F F A GATLGEPQ P GK K+DE FQK+VETY +SVT RIPV + F + A SQGC+ Sbjct: 81 FAFRATGATLGEPQIPDGKIKFDETFQKDVETYRKSVTIRIPVEASAP-FTLIATSQGCS 139 Query: 132 DKGLCYPPMTLKLAMSAQDIGKSVTPVGVNADAPGAGG----SDIDGIAAVLKGGKLWSI 187 DKGLCY PM + S G +V + +A AG S++ I LK GKL +I Sbjct: 140 DKGLCYSPMDSEARFSVA--GGNVEVLASSASTAQAGNALPESEMGQIERSLKSGKLLAI 197 Query: 188 LSLFFLLGIGLSFTPCVLPMLPILSSIIVGQQPGAGGGRARSFLLSVDYSLGMALVYTAL 247 L LFFLLG+GL+FTPCVLPM+PILSSIIVG+ G R+R F+L++ YSLGMA+VYT L Sbjct: 198 LPLFFLLGLGLAFTPCVLPMVPILSSIIVGE--GTQVKRSRGFVLALVYSLGMAIVYTLL 255 Query: 248 GVAAGMLGEGLSAYLQNPWVLGAFAVLMAGLALSMFDLYTLQVPASLQSKLSTASGGGS- 306 G AAG++GEGL+A LQNPWVLG FA+LMA LALSMFD+Y LQ+PA++Q++L+ AS S Sbjct: 256 GTAAGLIGEGLAAALQNPWVLGTFAILMAVLALSMFDVYQLQMPAAIQTRLTQASEKQSA 315 Query: 307 GKWIGVFLMGAISALIVGPCVAAPLAGALLYISQTGNVVLGGSALFSMALGMSVPLLLVG 366 GK IGVF+MGA+SALIVGPCVAAPLAGAL+YISQT +V++GGSALF+MA+GMSVPLLLVG Sbjct: 316 GKLIGVFVMGALSALIVGPCVAAPLAGALVYISQTRDVMIGGSALFAMAIGMSVPLLLVG 375 Query: 367 ASAGALLPRAGAWMDAVKRFFGVLMLGTALWMVSPVIPSWLQVAGWAALGVGYGAFLLWT 426 SAGALLPRAG WMDAVKRFFGVLML ALWMVSPVIP+ Q+ GW AL VGYGA+LLW Sbjct: 376 LSAGALLPRAGMWMDAVKRFFGVLMLAVALWMVSPVIPAVAQMLGWTALLVGYGAYLLWG 435 Query: 427 RPAGWMSRALGLVVVTLGLLQLVSVATGGRDPLAPLSHLRGQSAAAQATDFVRIRSSAEL 486 GW S+A+GL+ V LG+LQLV VATGGRD LAPL HL+G+ + F R+++ A+L Sbjct: 436 AKGGWFSKAVGLICVVLGMLQLVGVATGGRDALAPLEHLQGER--QEKVSFKRVKTVADL 493 Query: 487 DAALKENAAGERRPVMLDFYADWCVSCKEMERFTFTDARVKERFGQMLLLQIDVTANNAD 546 DAAL + + + VMLDFYADWCVSC EME+ TFTD RV+ F +M+LLQ+DVTAN+A+ Sbjct: 494 DAALVQ---AKGKHVMLDFYADWCVSCIEMEKLTFTDQRVRTHFAEMVLLQVDVTANDAE 550 Query: 547 DRAMLKRFNLFGPGHHVF 564 D+AML+RFNLFGP +F Sbjct: 551 DKAMLRRFNLFGPPGIIF 568 >ref|YP_004751090.1| cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase [Collimonas fungivorans Ter331] gb|AEK60267.1| Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase [Collimonas fungivorans Ter331] Length = 613 Score = 610 bits (1573), Expect = e-172, Method: Composition-based stats. Identities = 350/582 (60%), Positives = 421/582 (72%), Gaps = 42/582 (7%) Query: 18 LLALLGLLVAKAAKAAE--DYLPPEQAFQLTGRMVDAQTLELSYRIADGYYMYRDRFHFS 75 L L +L A AE DYL PE AF+ + RM DA+T E++Y IADGYYMYR+RFHF Sbjct: 8 LSVLFAMLFAFTVAHAEEDDYLAPEVAFKFSARMADAKTAEVTYAIADGYYMYRERFHFK 67 Query: 76 AEGATLGEPQFPAGKRKYDENFQKEVETYHQSVTARIPVSGAVKDFVISAVSQGCADKGL 135 AEGATLGEPQ PAG K+D+ F K VETYH SVT R+PV A F + + QGCADKGL Sbjct: 68 AEGATLGEPQIPAGTVKFDQTFNKNVETYHHSVTIRLPVE-ANGSFTLISTGQGCADKGL 126 Query: 136 CYPPMTLKLAMSAQDIGKSVTPVGVNADAPGAGG-------------------------- 169 CYPPM +++S S + A G+GG Sbjct: 127 CYPPMDSSVSLSTTAASVSGGLLSAMGIAKGSGGAIDTPQATSATGNGPAAAAQAAGGAI 186 Query: 170 ------SDIDGIAAVLKGGKLWSILSLFFLLGIGLSFTPCVLPMLPILSSIIVGQQPGAG 223 ++ I + L GGKL I+ LF LLG+GL+FTPCVLPM+PILSSIIVG+ G Sbjct: 187 SSAPADTESGRIESSLNGGKLLVIMPLFLLLGLGLAFTPCVLPMVPILSSIIVGE--GTK 244 Query: 224 GGRARSFLLSVDYSLGMALVYTALGVAAGMLGEGLSAYLQNPWVLGAFAVLMAGLALSMF 283 R R FLLS+ Y+LGMALVYTALGVAAG+ GEGL+A LQNPWVL AFA+LM ++LSMF Sbjct: 245 VSRRRGFLLSLTYALGMALVYTALGVAAGLAGEGLAATLQNPWVLSAFALLMVLMSLSMF 304 Query: 284 DLYTLQVPASLQSKLSTASGGGS-GKWIGVFLMGAISALIVGPCVAAPLAGALLYISQTG 342 Y LQ+PA+ Q++L+ ASG S GK IGVF+MGAISALIVGPCVAAPLAGAL+YISQT Sbjct: 305 GFYELQLPAAFQTRLTQASGQQSAGKLIGVFVMGAISALIVGPCVAAPLAGALVYISQTR 364 Query: 343 NVVLGGSALFSMALGMSVPLLLVGASAGALLPRAGAWMDAVKRFFGVLMLGTALWMVSPV 402 +VV+GGSALF+MA+GMSVPL+LVG SAG+LLPRAGAWM++VKRFFGVLML ALWMV+PV Sbjct: 365 DVVIGGSALFAMAVGMSVPLILVGISAGSLLPRAGAWMESVKRFFGVLMLAVALWMVAPV 424 Query: 403 IPSWLQVAGWAALGVGYGAFLLWTRPAGWMSRALGLVVVTLGLLQLVSVATGGRDPLAPL 462 IP Q+ GWAALG+GYGAFLLW R + W ++A G+V + G++QLV +GGRD LAPL Sbjct: 425 IPVLAQMLGWAALGIGYGAFLLWGRSSAWFAKAFGVVFMVCGVVQLVGGISGGRDVLAPL 484 Query: 463 SHLRGQSAAAQATDFVRIRSSAELDAALKENAAGERRPVMLDFYADWCVSCKEMERFTFT 522 +HL G +A A FVR++S AELDAAL + +P +LDFYADWCVSCKEME+FTFT Sbjct: 485 AHLGGAQQSAHA-QFVRVKSVAELDAALAQTNG---KPALLDFYADWCVSCKEMEKFTFT 540 Query: 523 DARVKERFGQMLLLQIDVTANNADDRAMLKRFNLFGPGHHVF 564 D RV+ RFG+M+LLQIDVTANNADD+AMLKRFNLFGP +F Sbjct: 541 DPRVQARFGEMILLQIDVTANNADDKAMLKRFNLFGPPGIIF 582 >ref|YP_001101368.1| thiol:disulfide interchange protein, cytochrome c-type biogenesis, electron carrier, N-terminal interacts with and activates DsbC [Herminiimonas arsenicoxydans] emb|CAL63247.1| Thiol:disulfide interchange protein dsbD precursor (Protein-disulfide reductase) (Disulfide reductase) [Herminiimonas arsenicoxydans] Length = 586 Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 327/543 (60%), Positives = 404/543 (74%), Gaps = 18/543 (3%) Query: 32 AAEDYLPPEQAFQLTGRMVDAQTLELSYRIADGYYMYRDRFHFSAEGATLGEPQFPAGKR 91 A ED+L PE AFQ + RMVD +T+ ++Y IADGYYMYR+RF F A A LGE PAGK Sbjct: 20 ADEDFLAPEIAFQFSARMVDTKTIAVTYAIADGYYMYRERFAFKASDAALGEAVIPAGKV 79 Query: 92 KYDENFQKEVETYHQSVTARIPVSGAVKDFVISAVSQGCADKGLCYPPMTLKLAMSAQ-- 149 ++D+ FQK+VETY +SVT RIPV + + F ++A SQGC+DKGLCY PM + + AQ Sbjct: 80 EFDQTFQKDVETYRKSVTIRIPVQASGR-FTLTASSQGCSDKGLCYSPMDSQANLFAQGD 138 Query: 150 -------DIGKSVTPVGVNADAPGAGGSDIDGIAAVLKGGKLWSILSLFFLLGIGLSFTP 202 D G + +A ++ I L+ G+L +IL LF LLG+GL+FTP Sbjct: 139 GAKSGAPDKGLKILSASDDATKNVVLDAETGRIERALQSGELLAILPLFLLLGLGLAFTP 198 Query: 203 CVLPMLPILSSIIVGQQPGAGGGRARSFLLSVDYSLGMALVYTALGVAAGMLGEGLSAYL 262 CVLPM+PILSSII+G+ GA R+R LL+V YSLGMALVYT LG+AAG +GEGLSA L Sbjct: 199 CVLPMVPILSSIIIGE--GAQTKRSRGLLLAVVYSLGMALVYTCLGLAAGWVGEGLSAAL 256 Query: 263 QNPWVLGAFAVLMAGLALSMFDLYTLQVPASLQSKLSTASGGGS-GKWIGVFLMGAISAL 321 QNPWVL FA+LM GLALSMFD+Y LQ+PA +Q +L+ AS S GK +GVF+MGA+SAL Sbjct: 257 QNPWVLSGFAILMVGLALSMFDVYHLQMPAFVQHRLTRASERQSAGKLVGVFVMGALSAL 316 Query: 322 IVGPCVAAPLAGALLYISQTGNVVLGGSALFSMALGMSVPLLLVGASAGALLPRAGAWMD 381 IVGPCVAAPLAGALLYISQT ++V+GGSALF+MA+GMSVPLLLVGASAG LLPR GAWM+ Sbjct: 317 IVGPCVAAPLAGALLYISQTRDLVIGGSALFAMAIGMSVPLLLVGASAGTLLPRTGAWMN 376 Query: 382 AVKRFFGVLMLGTALWMVSPVIPSWLQVAGWAALGVGYGAFLLWTRPAGWMSRALGLVVV 441 VKRFFGVLML A+WM+SPVIP+ +Q+ AALG+ YGA+LLW W ++ALGLV Sbjct: 377 GVKRFFGVLMLALAIWMISPVIPAVVQMLALAALGLAYGAYLLWGAKGSWFAKALGLVFA 436 Query: 442 TLGLLQLVSVATGGRDPLAPLSHLRGQSAAAQATDFVRIRSSAELDAALKENAAGERRPV 501 LG +QLV V+TGGRD APL+HL + + FVR+++SAELDAA+ + A G+ V Sbjct: 437 ILGAMQLVGVSTGGRDAWAPLAHL--SADGVRKPVFVRVKTSAELDAAIAQ-AGGKN--V 491 Query: 502 MLDFYADWCVSCKEMERFTFTDARVKERFGQMLLLQIDVTANNADDRAMLKRFNLFGPGH 561 MLDFYADWCVSC EME+FTFTD RV +F M+LLQ+DVTANNA D+ ML+RFNLFGP Sbjct: 492 MLDFYADWCVSCIEMEKFTFTDPRVHAQFADMVLLQVDVTANNAYDKEMLRRFNLFGPPA 551 Query: 562 HVF 564 +F Sbjct: 552 IIF 554 >ref|YP_585429.1| Thiol:disulfide interchange protein (Protein-disulfide reductase) [Cupriavidus metallidurans CH34] gb|ABF10160.1| Thiol:disulfide interchange protein (Protein-disulfide reductase) [Cupriavidus metallidurans CH34] Length = 624 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 298/588 (50%), Positives = 383/588 (65%), Gaps = 42/588 (7%) Query: 9 RYPLLIVLALLALLGLLVAKAAKAAEDYLPPEQAFQLTGRMVDAQTLELSYRIADGYYMY 68 R+ + L + A L A +D+LPPEQAF+ R VD +T+E+ + +ADGYY+Y Sbjct: 2 RHIAALWLTVFACLFFWNVAHAATEDDFLPPEQAFRFAARQVDQKTVEVRFDVADGYYLY 61 Query: 69 RDRFHFSAEGA--TLGEPQFPAGKRKYDENFQKEVETYHQSVTARIPVSGAVKD--FVIS 124 R+RF F+A+ A LG+P+ PAGK +DE F K++ETY +V ++PV A D + + Sbjct: 62 RERFSFAAQPADVKLGKPEMPAGKVHFDETFGKDMETYRGAVVIKVPVEQAPADGRWSLV 121 Query: 125 AVSQGCADKGLCYPPMTLKLAMSAQDIGKSVTPVGVNADA-------------------- 164 SQGCADKGLCYPPM + +G G A + Sbjct: 122 VTSQGCADKGLCYPPMESVYKVGGSALGNLFGDRGAAAQSTPEAQAPAAVQPAPDRAAPT 181 Query: 165 -PGAGGSDIDGIAAVLKGGKLWSILSLFFLLGIGLSFTPCVLPMLPILSSIIVGQQPGAG 223 P D D IA L L I +LFF LGI L+FTPCVLPM+PILSSI+VG+ Sbjct: 182 RPSKVVDDTDRIANALASRNLALIGALFFGLGILLTFTPCVLPMVPILSSIVVGEHVT-- 239 Query: 224 GGRARSFLLSVDYSLGMALVYTALGVAAGMLGEGLSAYLQNPWVLGAFAVLMAGLALSMF 283 R R+FL+S+ Y LGMA+VYT +GVAAG+ GEGL+A LQ PWVLGAFA LM LA+SMF Sbjct: 240 --RGRAFLVSLSYVLGMAVVYTTVGVAAGLAGEGLAAALQTPWVLGAFAALMVALAMSMF 297 Query: 284 DLYTLQVPASLQSKLSTASGG-GSGKWIGVFLMGAISALIVGPCVAAPLAGALLYISQTG 342 +Y LQ+P Q++L+ +S SG+++G LMGAISALIVGPCV APLAGAL YI+QTG Sbjct: 298 GMYELQMPQRWQARLTESSNRRQSGQFVGAALMGAISALIVGPCVTAPLAGALAYIAQTG 357 Query: 343 NVVLGGSALFSMALGMSVPLLLVGASAGALLPRAGAWMDAVKRFFGVLMLGTALWMVSPV 402 + + GG+AL +MALGM VPL+LVG AG LLPRAG WM+A KRFFG L+LG A+WMV+PV Sbjct: 358 DAITGGAALMAMALGMGVPLMLVGMGAGNLLPRAGKWMEATKRFFGFLLLGVAIWMVTPV 417 Query: 403 IPSWLQV----AGWAALGVGYGAF-LLWTRPAGWM--SRALGLVVVTLGLLQLVSVATGG 455 +P+W+ + A V GAF L P G M + LGL+ +G +Q+V VA+GG Sbjct: 418 LPAWVVMLAWAALLLVAAVYLGAFDALGPDPRGVMRLGKGLGLLAALVGAIQIVGVASGG 477 Query: 456 RDPLAPLSHLRGQSAA----AQATDFVRIRSSAELDAALKENAAGERRPVMLDFYADWCV 511 R+PL PLSHL +A A F R+R+ AELDA + + A+ RPV+LDFYADWCV Sbjct: 478 RNPLQPLSHLSLSAATLPPHAAEIRFERVRNIAELDARIAQ-ASAAGRPVLLDFYADWCV 536 Query: 512 SCKEMERFTFTDARVKERFGQMLLLQIDVTANNADDRAMLKRFNLFGP 559 SCKEME+ TF DA+V+ + ++LLQ DVTANNADDRA+LKRF LFGP Sbjct: 537 SCKEMEKLTFPDAKVRAQLADVVLLQADVTANNADDRALLKRFGLFGP 584