BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0357.p         (115 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773576.1| periplasmic divalent cation tolerance protei...   182   2e-44
ref|ZP_03699312.1| CutA1 divalent ion tolerance protein [Lutiell...   124   3e-27
ref|YP_544141.1| CutA1 divalent ion tolerance protein [Methyloba...   120   7e-26
ref|YP_004038463.1| cuta1 divalent ion tolerance protein [Methyl...   120   7e-26
ref|YP_003525462.1| CutA1 divalent ion tolerance protein [Sidero...   119   1e-25

>ref|YP_003773576.1| periplasmic divalent cation tolerance protein [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ61668.1| periplasmic divalent cation tolerance protein [Herbaspirillum
           seropedicae SmR1]
          Length = 115

 Score =  182 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 100/115 (86%), Positives = 110/115 (95%)

Query: 1   MSASLLNQPLLVLANVPDQALAERLSNTLVEQGLAACVNILSPVQSVYRWQGKIQRDTEI 60
           MSASLLNQPLLVLAN+PDQALAER+++ LVEQGLAACVNIL PV+SVYRWQGK+QRDTE+
Sbjct: 1   MSASLLNQPLLVLANLPDQALAERIADALVEQGLAACVNILPPVKSVYRWQGKVQRDTEV 60

Query: 61  PLLIKTTQARYQELEQAIVQLHPYDVPEIIALPITAGLPAYLAWMQDETVRPLRV 115
           P+ IKTTQARYQELEQAI+Q HPYDVPE+IALPITAGLPAYLAWMQDET RPLRV
Sbjct: 61  PVFIKTTQARYQELEQAILQAHPYDVPEVIALPITAGLPAYLAWMQDETARPLRV 115


>ref|ZP_03699312.1| CutA1 divalent ion tolerance protein [Lutiella nitroferrum 2002]
 gb|EEG08026.1| CutA1 divalent ion tolerance protein [Lutiella nitroferrum 2002]
          Length = 114

 Score =  124 bits (312), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/104 (59%), Positives = 80/104 (76%)

Query: 7   NQPLLVLANVPDQALAERLSNTLVEQGLAACVNILSPVQSVYRWQGKIQRDTEIPLLIKT 66
           N+ LLVL N PD+A A R++  LVE+ LAACVNIL  VQSVYRWQG+I+  TE+PLL+KT
Sbjct: 4   NKCLLVLCNTPDRATASRIARQLVEERLAACVNILPAVQSVYRWQGRIEEATEVPLLVKT 63

Query: 67  TQARYQELEQAIVQLHPYDVPEIIALPITAGLPAYLAWMQDETV 110
           T+  Y  LE+ +V+LHPY+VPEI+A  I +GLPAYL W+  E +
Sbjct: 64  TKRAYAGLERRLVELHPYEVPEIVACDIASGLPAYLTWVAGEVL 107


>ref|YP_544141.1| CutA1 divalent ion tolerance protein [Methylobacillus flagellatus
           KT]
 gb|ABE48300.1| CutA1 divalent ion tolerance protein [Methylobacillus flagellatus
           KT]
          Length = 115

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 60/100 (60%), Positives = 79/100 (79%)

Query: 10  LLVLANVPDQALAERLSNTLVEQGLAACVNILSPVQSVYRWQGKIQRDTEIPLLIKTTQA 69
           +LVL N+PDQ  A  ++  L+ + LAACVN+L+P QSVY+WQGK++  TEIPLLIKTT  
Sbjct: 14  ILVLTNLPDQHSAANIARELISRKLAACVNLLAPCQSVYQWQGKMETATEIPLLIKTTSL 73

Query: 70  RYQELEQAIVQLHPYDVPEIIALPITAGLPAYLAWMQDET 109
           RY +LEQ I +LHPY++PEII +P+T GLPAYL W+ +ET
Sbjct: 74  RYPQLEQVIRELHPYELPEIIHVPVTGGLPAYLTWLHEET 113


>ref|YP_004038463.1| cuta1 divalent ion tolerance protein [Methylovorus sp. MP688]
 gb|ADQ83227.1| CutA1 divalent ion tolerance protein [Methylovorus sp. MP688]
          Length = 117

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 62/108 (57%), Positives = 82/108 (75%)

Query: 2   SASLLNQPLLVLANVPDQALAERLSNTLVEQGLAACVNILSPVQSVYRWQGKIQRDTEIP 61
           +A   ++ +LVL N+PDQ  A  L+ +LV   LAACVNIL+P  SVYRWQGK++   EIP
Sbjct: 8   NAVTASEAILVLTNMPDQTSANSLAASLVNARLAACVNILTPCTSVYRWQGKVETANEIP 67

Query: 62  LLIKTTQARYQELEQAIVQLHPYDVPEIIALPITAGLPAYLAWMQDET 109
           LLIKT + +Y  L+QAIVQ HPY++PEI+ +PI+ GLPAYLAW+ +ET
Sbjct: 68  LLIKTCRTQYAALQQAIVQQHPYELPEILCVPISTGLPAYLAWLNEET 115


>ref|YP_003525462.1| CutA1 divalent ion tolerance protein [Sideroxydans lithotrophicus
           ES-1]
 gb|ADE13075.1| CutA1 divalent ion tolerance protein [Sideroxydans lithotrophicus
           ES-1]
          Length = 112

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/100 (57%), Positives = 81/100 (81%)

Query: 10  LLVLANVPDQALAERLSNTLVEQGLAACVNILSPVQSVYRWQGKIQRDTEIPLLIKTTQA 69
           ++V+ N+PD+A AER+++TLV  G+AACVN+L+   SVYRWQGK++R +E+P+LIKTT+ 
Sbjct: 7   VMVITNLPDRATAERIADTLVTDGVAACVNVLAECTSVYRWQGKLERASEVPMLIKTTRE 66

Query: 70  RYQELEQAIVQLHPYDVPEIIALPITAGLPAYLAWMQDET 109
            Y +LE  + +LHPY+VPEIIALP++AG P YL W+  ET
Sbjct: 67  NYPKLEDVLRKLHPYEVPEIIALPVSAGWPDYLNWVVQET 106