BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0349.p         (144 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001101377.1| 50S ribosomal protein L15 [Herminiimonas ars...   209   1e-52
ref|YP_004751080.1| 50S ribosomal protein L15p (L27Ae) [Collimon...   208   3e-52
ref|YP_003773567.1| 50S ribosomal protein L15 [Herbaspirillum se...   206   9e-52
ref|YP_001355082.1| large subunit ribosomal protein L15 [Janthin...   206   1e-51
ref|ZP_08274149.1| LSU ribosomal protein L15p (L27Ae) [Oxalobact...   204   4e-51

>ref|YP_001101377.1| 50S ribosomal protein L15 [Herminiimonas arsenicoxydans]
 sp|A4G9R9|RL15_HERAR RecName: Full=50S ribosomal protein L15
 emb|CAL63256.1| 50S ribosomal subunit protein L15 [Herminiimonas arsenicoxydans]
          Length = 143

 Score =  209 bits (531), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 129/143 (90%), Positives = 137/143 (95%)

Query: 1   MQLNTIQPADGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60
           M+LNTIQPADGAKH KRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR
Sbjct: 1   MELNTIQPADGAKHYKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60

Query: 61  LPKRGFKSLATPYKAEVRLSDLEKLPVAEIDVLALKQAGLVSELARVVRIIKAGELTKKV 120
           LPKRGFKSLATPYKAEVRLSDLE LPV EID+LALKQAG++ ELARVVR+I +GELTKKV
Sbjct: 61  LPKRGFKSLATPYKAEVRLSDLEALPVTEIDILALKQAGVIGELARVVRVILSGELTKKV 120

Query: 121 TVKGLIATAGAKAAIEAAGGSIA 143
           T+KGLIAT GAKAAIEAAGGS+A
Sbjct: 121 TLKGLIATKGAKAAIEAAGGSVA 143


>ref|YP_004751080.1| 50S ribosomal protein L15p (L27Ae) [Collimonas fungivorans Ter331]
 gb|AEK60257.1| LSU ribosomal protein L15p (L27Ae) [Collimonas fungivorans Ter331]
          Length = 149

 Score =  208 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 124/143 (86%), Positives = 136/143 (95%)

Query: 1   MQLNTIQPADGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60
           M+LNTIQPADGAKH KRRVGRGIGSG+GKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR
Sbjct: 7   MELNTIQPADGAKHYKRRVGRGIGSGIGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 66

Query: 61  LPKRGFKSLATPYKAEVRLSDLEKLPVAEIDVLALKQAGLVSELARVVRIIKAGELTKKV 120
           LPKRGFKS+ATP+KAEVRLSDLE LPV EID+L LKQAG++ ELARVVR+I +GE+TKKV
Sbjct: 67  LPKRGFKSMATPFKAEVRLSDLENLPVTEIDILVLKQAGVIGELARVVRVILSGEVTKKV 126

Query: 121 TVKGLIATAGAKAAIEAAGGSIA 143
           T+KGLIAT GAKAAIEAAGGS+A
Sbjct: 127 TLKGLIATKGAKAAIEAAGGSVA 149


>ref|YP_003773567.1| 50S ribosomal protein L15 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61659.1| 50S ribosomal subunit L15 protein [Herbaspirillum seropedicae SmR1]
          Length = 144

 Score =  206 bits (524), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 143/144 (99%), Positives = 144/144 (100%)

Query: 1   MQLNTIQPADGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60
           MQLNTIQPA+GAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR
Sbjct: 1   MQLNTIQPAEGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60

Query: 61  LPKRGFKSLATPYKAEVRLSDLEKLPVAEIDVLALKQAGLVSELARVVRIIKAGELTKKV 120
           LPKRGFKSLATPYKAEVRLSDLEKLPVAEIDVLALKQAGLVSELARVVRIIKAGELTKKV
Sbjct: 61  LPKRGFKSLATPYKAEVRLSDLEKLPVAEIDVLALKQAGLVSELARVVRIIKAGELTKKV 120

Query: 121 TVKGLIATAGAKAAIEAAGGSIAE 144
           TVKGLIATAGAKAAIEAAGGSIAE
Sbjct: 121 TVKGLIATAGAKAAIEAAGGSIAE 144


>ref|YP_001355082.1| large subunit ribosomal protein L15 [Janthinobacterium sp.
           Marseille]
 sp|A6T3I5|RL15_JANMA RecName: Full=50S ribosomal protein L15
 gb|ABR88906.1| large subunit ribosomal protein L15 [Janthinobacterium sp.
           Marseille]
          Length = 143

 Score =  206 bits (523), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 126/143 (88%), Positives = 136/143 (95%)

Query: 1   MQLNTIQPADGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60
           M+LN+IQPADGAKH KRRVGRGIGSGLGKT+GRGHKGQKSRSGGFHKVGFEGGQMPLQRR
Sbjct: 1   MELNSIQPADGAKHYKRRVGRGIGSGLGKTSGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60

Query: 61  LPKRGFKSLATPYKAEVRLSDLEKLPVAEIDVLALKQAGLVSELARVVRIIKAGELTKKV 120
           LPKRGFKSLATPYKAEVRLSDLE LPV EID+LALKQAG++ ELARVVR+I +G +TKKV
Sbjct: 61  LPKRGFKSLATPYKAEVRLSDLEALPVTEIDILALKQAGVIGELARVVRVILSGSITKKV 120

Query: 121 TVKGLIATAGAKAAIEAAGGSIA 143
           TVKGLIAT GAKAAIEAAGGS+A
Sbjct: 121 TVKGLIATKGAKAAIEAAGGSVA 143


>ref|ZP_08274149.1| LSU ribosomal protein L15p (L27Ae) [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF32379.1| LSU ribosomal protein L15p (L27Ae) [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 143

 Score =  204 bits (518), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 121/143 (84%), Positives = 136/143 (95%)

Query: 1   MQLNTIQPADGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60
           M+LN+IQPADGAKH KRRVGRGIGSG+GKTAGRGHKGQKSR+GGFHKVGFEGGQMPLQRR
Sbjct: 1   MELNSIQPADGAKHYKRRVGRGIGSGIGKTAGRGHKGQKSRAGGFHKVGFEGGQMPLQRR 60

Query: 61  LPKRGFKSLATPYKAEVRLSDLEKLPVAEIDVLALKQAGLVSELARVVRIIKAGELTKKV 120
           LPKRGFKS+ATP+KAEVRLSDLE LPV E+D+LALKQAG++SELARVVR+I +GELTKKV
Sbjct: 61  LPKRGFKSMATPFKAEVRLSDLESLPVLEVDILALKQAGVISELARVVRVILSGELTKKV 120

Query: 121 TVKGLIATAGAKAAIEAAGGSIA 143
           ++KGLI T GAKAAIEA GGS+A
Sbjct: 121 SLKGLIVTKGAKAAIEAVGGSVA 143