BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0335.p         (110 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773553.1| 50S ribosomal protein L22 [Herbaspirillum se...   191   3e-47
ref|ZP_08274067.1| LSU ribosomal protein L22p (L17e) [Oxalobacte...   185   2e-45
ref|YP_004751066.1| 50S ribosomal protein L22p (L17e) [Collimona...   184   5e-45
ref|YP_001355096.1| large subunit ribosomal protein L22 [Janthin...   180   5e-44
ref|ZP_04577850.1| large subunit ribosomal protein L22 [Oxalobac...   179   9e-44

>ref|YP_003773553.1| 50S ribosomal protein L22 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61645.1| 50S ribosomal subunit L22 protein [Herbaspirillum seropedicae SmR1]
          Length = 110

 Score =  191 bits (485), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 110/110 (100%), Positives = 110/110 (100%)

Query: 1   MMETKATLRGVHLSAQKGRLVADLIRGKKVDQALNILAFSPKKGAVIIKKVLESAIANAE 60
           MMETKATLRGVHLSAQKGRLVADLIRGKKVDQALNILAFSPKKGAVIIKKVLESAIANAE
Sbjct: 1   MMETKATLRGVHLSAQKGRLVADLIRGKKVDQALNILAFSPKKGAVIIKKVLESAIANAE 60

Query: 61  HNDGADIDELKVKTIYVEKGAVLKRFTARAKGRGDRISKQSCHIYVTVGN 110
           HNDGADIDELKVKTIYVEKGAVLKRFTARAKGRGDRISKQSCHIYVTVGN
Sbjct: 61  HNDGADIDELKVKTIYVEKGAVLKRFTARAKGRGDRISKQSCHIYVTVGN 110


>ref|ZP_08274067.1| LSU ribosomal protein L22p (L17e) [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF32469.1| LSU ribosomal protein L22p (L17e) [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 110

 Score =  185 bits (469), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 105/110 (95%), Positives = 107/110 (97%)

Query: 1   MMETKATLRGVHLSAQKGRLVADLIRGKKVDQALNILAFSPKKGAVIIKKVLESAIANAE 60
           MMETKATLRGV LSAQKGRLVADLIRGKKVDQALNIL FSPKKGAVIIK+VLESAIANAE
Sbjct: 1   MMETKATLRGVRLSAQKGRLVADLIRGKKVDQALNILQFSPKKGAVIIKRVLESAIANAE 60

Query: 61  HNDGADIDELKVKTIYVEKGAVLKRFTARAKGRGDRISKQSCHIYVTVGN 110
           HNDGADIDELKV TIYVEKG+VLKRFTARAKGRGDRISKQSCHIYVTVGN
Sbjct: 61  HNDGADIDELKVTTIYVEKGSVLKRFTARAKGRGDRISKQSCHIYVTVGN 110


>ref|YP_004751066.1| 50S ribosomal protein L22p (L17e) [Collimonas fungivorans Ter331]
 gb|AEK60243.1| LSU ribosomal protein L22p (L17e) [Collimonas fungivorans Ter331]
          Length = 110

 Score =  184 bits (466), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 104/110 (94%), Positives = 107/110 (97%)

Query: 1   MMETKATLRGVHLSAQKGRLVADLIRGKKVDQALNILAFSPKKGAVIIKKVLESAIANAE 60
           MMETKATLRGV LSAQKGRLVADLIRGKK+DQALNILAFSPKKGA IIK+VLESAIANAE
Sbjct: 1   MMETKATLRGVRLSAQKGRLVADLIRGKKIDQALNILAFSPKKGAAIIKRVLESAIANAE 60

Query: 61  HNDGADIDELKVKTIYVEKGAVLKRFTARAKGRGDRISKQSCHIYVTVGN 110
           HNDGADIDELKV TIYVEKG+VLKRFTARAKGRGDRISKQSCHIYVTVGN
Sbjct: 61  HNDGADIDELKVTTIYVEKGSVLKRFTARAKGRGDRISKQSCHIYVTVGN 110


>ref|YP_001355096.1| large subunit ribosomal protein L22 [Janthinobacterium sp.
           Marseille]
 sp|A6T3J9|RL22_JANMA RecName: Full=50S ribosomal protein L22
 gb|ABR88994.1| large subunit ribosomal protein L22 [Janthinobacterium sp.
           Marseille]
          Length = 110

 Score =  180 bits (457), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 103/110 (93%), Positives = 105/110 (95%)

Query: 1   MMETKATLRGVHLSAQKGRLVADLIRGKKVDQALNILAFSPKKGAVIIKKVLESAIANAE 60
           MMETKATLRGV LSAQKGRLVAD IRGKKVDQALNIL FSPKKGA IIK+VLESAIANAE
Sbjct: 1   MMETKATLRGVRLSAQKGRLVADQIRGKKVDQALNILQFSPKKGAAIIKRVLESAIANAE 60

Query: 61  HNDGADIDELKVKTIYVEKGAVLKRFTARAKGRGDRISKQSCHIYVTVGN 110
           HNDGADIDELKV TIYVEKG+VLKRFTARAKGRGDRISKQSCHIYVTVGN
Sbjct: 61  HNDGADIDELKVTTIYVEKGSVLKRFTARAKGRGDRISKQSCHIYVTVGN 110


>ref|ZP_04577850.1| large subunit ribosomal protein L22 [Oxalobacter formigenes HOxBLS]
 gb|EEO28812.1| large subunit ribosomal protein L22 [Oxalobacter formigenes HOxBLS]
          Length = 110

 Score =  179 bits (455), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 95/110 (86%), Positives = 107/110 (97%)

Query: 1   MMETKATLRGVHLSAQKGRLVADLIRGKKVDQALNILAFSPKKGAVIIKKVLESAIANAE 60
           MMETKA+LRGVHLSAQKGRL+ADLIRGKKVDQAL+IL+F+PKKGAVIIK+VLESAIANAE
Sbjct: 1   MMETKASLRGVHLSAQKGRLIADLIRGKKVDQALDILSFTPKKGAVIIKQVLESAIANAE 60

Query: 61  HNDGADIDELKVKTIYVEKGAVLKRFTARAKGRGDRISKQSCHIYVTVGN 110
           HNDGADIDELKV +IYVE+G  +KR++ARAKGRGDRISKQ+CHIYVTVGN
Sbjct: 61  HNDGADIDELKVSSIYVERGTFMKRYSARAKGRGDRISKQTCHIYVTVGN 110