BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0332.p         (105 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773550.1| 50S ribosomal protein L23 [Herbaspirillum se...   156   8e-37
ref|YP_001101394.1| 50S ribosomal protein L23 [Herminiimonas ars...   146   1e-33
ref|YP_001355099.1| 50S ribosomal protein L23 [Janthinobacterium...   145   2e-33
ref|ZP_08272690.1| LSU ribosomal protein L23p (L23Ae) [Oxalobact...   140   7e-32
ref|YP_004751063.1| 50S ribosomal protein L23p (L23Ae) [Collimon...   139   2e-31

>ref|YP_003773550.1| 50S ribosomal protein L23 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61642.1| 50S ribosomal subunit L23 protein [Herbaspirillum seropedicae SmR1]
          Length = 105

 Score =  156 bits (395), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 105/105 (100%), Positives = 105/105 (100%)

Query: 1   MNAIVKHSEERLMKVLLAPVISEKATFVAEKNEQVVFLVAKDATKLEVKAAVELLFKVEV 60
           MNAIVKHSEERLMKVLLAPVISEKATFVAEKNEQVVFLVAKDATKLEVKAAVELLFKVEV
Sbjct: 1   MNAIVKHSEERLMKVLLAPVISEKATFVAEKNEQVVFLVAKDATKLEVKAAVELLFKVEV 60

Query: 61  ESVQVANRQGKQKRSRNGMGRRNHTRRAFVSLKPGQEINFTEEAK 105
           ESVQVANRQGKQKRSRNGMGRRNHTRRAFVSLKPGQEINFTEEAK
Sbjct: 61  ESVQVANRQGKQKRSRNGMGRRNHTRRAFVSLKPGQEINFTEEAK 105


>ref|YP_001101394.1| 50S ribosomal protein L23 [Herminiimonas arsenicoxydans]
 sp|A4G9T6|RL23_HERAR RecName: Full=50S ribosomal protein L23
 emb|CAL63273.1| 50S ribosomal subunit protein L23 [Herminiimonas arsenicoxydans]
          Length = 105

 Score =  146 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 93/105 (88%), Positives = 98/105 (93%)

Query: 1   MNAIVKHSEERLMKVLLAPVISEKATFVAEKNEQVVFLVAKDATKLEVKAAVELLFKVEV 60
           M+A++KHSEERLMKVLLAPVISEKATFVAEKNEQVVFLV  DATKLE+KAAVELLFKV+V
Sbjct: 1   MSAVIKHSEERLMKVLLAPVISEKATFVAEKNEQVVFLVMPDATKLEIKAAVELLFKVQV 60

Query: 61  ESVQVANRQGKQKRSRNGMGRRNHTRRAFVSLKPGQEINFTEEAK 105
           ESVQVANRQGKQKRS    GRRNHTRRAFV LKPGQEINFTEEAK
Sbjct: 61  ESVQVANRQGKQKRSGRFNGRRNHTRRAFVCLKPGQEINFTEEAK 105


>ref|YP_001355099.1| 50S ribosomal protein L23 [Janthinobacterium sp. Marseille]
 sp|A6T3K2|RL23_JANMA RecName: Full=50S ribosomal protein L23
 gb|ABR88667.1| large subunit ribosomal protein L23 [Janthinobacterium sp.
           Marseille]
          Length = 105

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 93/105 (88%), Positives = 97/105 (92%)

Query: 1   MNAIVKHSEERLMKVLLAPVISEKATFVAEKNEQVVFLVAKDATKLEVKAAVELLFKVEV 60
           M+AI+KHSEERLMKVLLAPVISEKATFVAEKNEQVVFLV  DATK E+KAAVELLFKV+V
Sbjct: 1   MSAILKHSEERLMKVLLAPVISEKATFVAEKNEQVVFLVMPDATKPEIKAAVELLFKVQV 60

Query: 61  ESVQVANRQGKQKRSRNGMGRRNHTRRAFVSLKPGQEINFTEEAK 105
           ESVQVANRQGKQKRS    GRRNHTRRAFV LKPGQEINFTEEAK
Sbjct: 61  ESVQVANRQGKQKRSGRFNGRRNHTRRAFVCLKPGQEINFTEEAK 105


>ref|ZP_08272690.1| LSU ribosomal protein L23p (L23Ae) [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF33842.1| LSU ribosomal protein L23p (L23Ae) [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 105

 Score =  140 bits (353), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 92/105 (87%), Positives = 96/105 (91%)

Query: 1   MNAIVKHSEERLMKVLLAPVISEKATFVAEKNEQVVFLVAKDATKLEVKAAVELLFKVEV 60
           M+A +K SEERLMKVLLAPVISEKATFVAEKNEQVVFL+  DATKLEVKAAVELLFKVEV
Sbjct: 1   MSANLKFSEERLMKVLLAPVISEKATFVAEKNEQVVFLIMPDATKLEVKAAVELLFKVEV 60

Query: 61  ESVQVANRQGKQKRSRNGMGRRNHTRRAFVSLKPGQEINFTEEAK 105
           ESVQVANRQGK+KRS    GRRNHTRRAFV LKPGQEINFTEEAK
Sbjct: 61  ESVQVANRQGKKKRSGKFNGRRNHTRRAFVCLKPGQEINFTEEAK 105


>ref|YP_004751063.1| 50S ribosomal protein L23p (L23Ae) [Collimonas fungivorans Ter331]
 gb|AEK60240.1| LSU ribosomal protein L23p (L23Ae) [Collimonas fungivorans Ter331]
          Length = 104

 Score =  139 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 94/105 (89%), Positives = 96/105 (91%), Gaps = 1/105 (0%)

Query: 1   MNAIVKHSEERLMKVLLAPVISEKATFVAEKNEQVVFLVAKDATKLEVKAAVELLFKVEV 60
           MNAI KHSEERLMKVLLAPVISEKAT VAEKNEQVVF +A DATKLEVKAAVELLFKV+V
Sbjct: 1   MNAI-KHSEERLMKVLLAPVISEKATMVAEKNEQVVFRIAPDATKLEVKAAVELLFKVQV 59

Query: 61  ESVQVANRQGKQKRSRNGMGRRNHTRRAFVSLKPGQEINFTEEAK 105
           ESVQVANR GKQKRS   MGRRNHTRRAFV LKPGQEINFTEEAK
Sbjct: 60  ESVQVANRLGKQKRSGKSMGRRNHTRRAFVCLKPGQEINFTEEAK 104