BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0315.p (534 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775092.1| glucose dehydrogenase [Herbaspirillum serope... 1095 0.0 dbj|BAK14054.1| glucose-methanol-choline oxidoreductase [Pantoea... 980 0.0 ref|YP_003522398.1| AdhB [Pantoea ananatis LMG 20103] >gi|291154... 979 0.0 ref|YP_004118240.1| FAD dependent oxidoreductase [Pantoea sp. At... 979 0.0 ref|YP_004211775.1| FAD dependent oxidoreductase [Rahnella sp. Y... 671 0.0 >ref|YP_003775092.1| glucose dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ63184.1| glucose dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 534 Score = 1095 bits (2831), Expect = 0.0, Method: Composition-based stats. Identities = 522/534 (97%), Positives = 531/534 (99%) Query: 1 MSNPNSADVVVIGAGVTGALLATRLAKTGKSVLLLESGPRMGRDQLVERFRSSAFKSDFM 60 MSN NSADVVVIGAGVTGALLATRLAKTGKSVLLLESGPRMGRDQLVERFRSSAFKSDFM Sbjct: 1 MSNLNSADVVVIGAGVTGALLATRLAKTGKSVLLLESGPRMGRDQLVERFRSSAFKSDFM 60 Query: 61 APYPYSPLAPHPRYTPEPNGYLQQKGPHAFNAQYIRMFGGTSWHWAAQLWRYVPNDFRQH 120 APYPYSPLAPHPRYTPEPNGYLQQKGPHAFNAQYIRMFGGTSWHWAAQLWRYVPNDFRQH Sbjct: 61 APYPYSPLAPHPRYTPEPNGYLQQKGPHAFNAQYIRMFGGTSWHWAAQLWRYVPNDFRQH 120 Query: 121 SLYGVGKDWPISYDDLEDYYYQAEVIAGVGGSPESGSPRKHPFPMERVPASWLQQRVTAR 180 SLYGVGKDWPISYDDLEDYYYQAEVIAGVGGSPESGSPRKHPFPMERVPASWLQQRVTAR Sbjct: 121 SLYGVGKDWPISYDDLEDYYYQAEVIAGVGGSPESGSPRKHPFPMERVPASWLQQRVTAR 180 Query: 181 LAPEFTVLDDSTGRNSRNYDGRPACCGNNNCMPLCPIDAQYHGGLAAQQAEDSGVQVITE 240 LAPEFTVLDDSTGRNSRNYDGRPACCGNNNCMPLCPIDAQYHGGLAAQQAEDSGV+VITE Sbjct: 181 LAPEFTVLDDSTGRNSRNYDGRPACCGNNNCMPLCPIDAQYHGGLAAQQAEDSGVKVITE 240 Query: 241 AVVYRLEHDEKGRIAAVHYYDWNKVSHRITAQTFVLAANAIETPKLLLMSVSDKFPQGIA 300 AVVYRLEHDEKGRIAA HYYDWNKVSHRITAQTFVLAANAIETPKLLLMS+SD+FPQGIA Sbjct: 241 AVVYRLEHDEKGRIAAAHYYDWNKVSHRITAQTFVLAANAIETPKLLLMSISDRFPQGIA 300 Query: 301 NARDNVGRNLCDHPAIGVTFDVDEEIWPGRGPVSPCSIGQFRDGDFRAEHAPFRIDISNA 360 NARDNVGRNLCDHPAIGV+FDVDEEIWPGRGPVSPCSIGQFRDGDFRAEHAPFRIDISNA Sbjct: 301 NARDNVGRNLCDHPAIGVSFDVDEEIWPGRGPVSPCSIGQFRDGDFRAEHAPFRIDISNA 360 Query: 361 SQVASVTKEVLAEGYFGKRLEEQILFRAARRLSIKNALEQLPDRNNRVTLGDKKDELGLP 420 SQVA+VTKEV+AEGYFGKRLEEQILFRAARRLSIKNALEQLPDRNNRVTLGDKKDELGLP Sbjct: 361 SQVAAVTKEVVAEGYFGKRLEEQILFRAARRLSIKNALEQLPDRNNRVTLGDKKDELGLP 420 Query: 421 VPALYWNVDDYVVKGTEKTRAAYDAIAARLGATNIKHSKSGAFSNRQHITGTLSMGLDPA 480 VPALYWNVDDYV+KGTE+TRA YDAIAA+LGATNIKHSKSGAFSNRQHITGTLSMGLDPA Sbjct: 421 VPALYWNVDDYVIKGTEQTRACYDAIAAKLGATNIKHSKSGAFSNRQHITGTLSMGLDPA 480 Query: 481 TSVTDAWGRAHDHENLFMVGTGVMPTVGTCNVTLTAMALALRTADKIIEESRHA 534 TSVTDAWGRAHDHENLFMVGTGVMPTVGTCNVTLTAMALALRTADKIIEESRHA Sbjct: 481 TSVTDAWGRAHDHENLFMVGTGVMPTVGTCNVTLTAMALALRTADKIIEESRHA 534 >dbj|BAK14054.1| glucose-methanol-choline oxidoreductase [Pantoea ananatis AJ13355] Length = 534 Score = 980 bits (2533), Expect = 0.0, Method: Composition-based stats. Identities = 459/534 (85%), Positives = 495/534 (92%) Query: 1 MSNPNSADVVVIGAGVTGALLATRLAKTGKSVLLLESGPRMGRDQLVERFRSSAFKSDFM 60 M SADVVVIGAGV GALLATRLAK GKSV+LLESGP++GRD+LVERFRSSAFKSDFM Sbjct: 1 MKKNESADVVVIGAGVNGALLATRLAKAGKSVVLLESGPKIGRDELVERFRSSAFKSDFM 60 Query: 61 APYPYSPLAPHPRYTPEPNGYLQQKGPHAFNAQYIRMFGGTSWHWAAQLWRYVPNDFRQH 120 +PYP+SP+AP PRYTPEPN YLQQ GP AFNAQYIR+FGGTSWHWAAQLWR+VPNDF+QH Sbjct: 61 SPYPFSPMAPQPRYTPEPNDYLQQLGPQAFNAQYIRIFGGTSWHWAAQLWRFVPNDFQQH 120 Query: 121 SLYGVGKDWPISYDDLEDYYYQAEVIAGVGGSPESGSPRKHPFPMERVPASWLQQRVTAR 180 +LYGVGKDWPI Y DLE YYY+AEVIAGVGGSP++GSPR PFPM RVPASWLQQRVTAR Sbjct: 121 TLYGVGKDWPIGYQDLEPYYYEAEVIAGVGGSPDNGSPRSKPFPMTRVPASWLQQRVTAR 180 Query: 181 LAPEFTVLDDSTGRNSRNYDGRPACCGNNNCMPLCPIDAQYHGGLAAQQAEDSGVQVITE 240 LAP+FTVLDDSTGRNSR+YDGRPACCGNNNCMP+CPIDAQYHGGLAAQQAED+GVQVITE Sbjct: 181 LAPDFTVLDDSTGRNSRSYDGRPACCGNNNCMPVCPIDAQYHGGLAAQQAEDTGVQVITE 240 Query: 241 AVVYRLEHDEKGRIAAVHYYDWNKVSHRITAQTFVLAANAIETPKLLLMSVSDKFPQGIA 300 AVVY+LEHD +GRI A HYYDWNK SHRITAQTFVLAANAIETPKLLLMS SDKFP GI Sbjct: 241 AVVYKLEHDAQGRIVAAHYYDWNKTSHRITAQTFVLAANAIETPKLLLMSTSDKFPHGIG 300 Query: 301 NARDNVGRNLCDHPAIGVTFDVDEEIWPGRGPVSPCSIGQFRDGDFRAEHAPFRIDISNA 360 NARDNVGRNLCDHPAIGVTFDVDEEIWPGRGPVSPCSIGQFRDG+FR EHAPFR+DISNA Sbjct: 301 NARDNVGRNLCDHPAIGVTFDVDEEIWPGRGPVSPCSIGQFRDGEFRREHAPFRLDISNA 360 Query: 361 SQVASVTKEVLAEGYFGKRLEEQILFRAARRLSIKNALEQLPDRNNRVTLGDKKDELGLP 420 SQVA+VTKEVL EGYFGK+L+EQ+ FRAARRLSIKNALEQLP+ +NRVTL KD LGLP Sbjct: 361 SQVAAVTKEVLEEGYFGKKLQEQVRFRAARRLSIKNALEQLPNPDNRVTLSSNKDALGLP 420 Query: 421 VPALYWNVDDYVVKGTEKTRAAYDAIAARLGATNIKHSKSGAFSNRQHITGTLSMGLDPA 480 PAL+W+VDDYV KGTEKTR YDAIAA+LGATNI+HSKSG FSNRQHI GTLSMGLDPA Sbjct: 421 TPALFWDVDDYVQKGTEKTRECYDAIAAKLGATNIRHSKSGKFSNRQHIIGTLSMGLDPA 480 Query: 481 TSVTDAWGRAHDHENLFMVGTGVMPTVGTCNVTLTAMALALRTADKIIEESRHA 534 TSVTD WGRAHDHENLFMVGTGVMPTVGTCNVTLTAMALALRTADKI++E++H Sbjct: 481 TSVTDVWGRAHDHENLFMVGTGVMPTVGTCNVTLTAMALALRTADKILQETQHG 534 >ref|YP_003522398.1| AdhB [Pantoea ananatis LMG 20103] gb|ADD79270.1| AdhB [Pantoea ananatis LMG 20103] Length = 987 Score = 979 bits (2531), Expect = 0.0, Method: Composition-based stats. Identities = 459/534 (85%), Positives = 495/534 (92%) Query: 1 MSNPNSADVVVIGAGVTGALLATRLAKTGKSVLLLESGPRMGRDQLVERFRSSAFKSDFM 60 M SADVVVIGAGV GALLATRLAK GKSV+LLESGP++GRD+LVERFRSSAFKSDFM Sbjct: 4 MKKNESADVVVIGAGVNGALLATRLAKAGKSVVLLESGPKIGRDELVERFRSSAFKSDFM 63 Query: 61 APYPYSPLAPHPRYTPEPNGYLQQKGPHAFNAQYIRMFGGTSWHWAAQLWRYVPNDFRQH 120 +PYP+SP+AP PRYTPEPN YLQQ GP AFNAQYIR+FGGTSWHWAAQLWR+VPNDF+QH Sbjct: 64 SPYPFSPMAPQPRYTPEPNDYLQQLGPQAFNAQYIRIFGGTSWHWAAQLWRFVPNDFQQH 123 Query: 121 SLYGVGKDWPISYDDLEDYYYQAEVIAGVGGSPESGSPRKHPFPMERVPASWLQQRVTAR 180 +LYGVGKDWPI Y DLE YYY+AEVIAGVGGSP++GSPR PFPM RVPASWLQQRVTAR Sbjct: 124 TLYGVGKDWPIGYQDLEPYYYEAEVIAGVGGSPDNGSPRSKPFPMARVPASWLQQRVTAR 183 Query: 181 LAPEFTVLDDSTGRNSRNYDGRPACCGNNNCMPLCPIDAQYHGGLAAQQAEDSGVQVITE 240 LAP+FTVLDDSTGRNSR+YDGRPACCGNNNCMP+CPIDAQYHGGLAAQQAED+GVQVITE Sbjct: 184 LAPDFTVLDDSTGRNSRSYDGRPACCGNNNCMPVCPIDAQYHGGLAAQQAEDTGVQVITE 243 Query: 241 AVVYRLEHDEKGRIAAVHYYDWNKVSHRITAQTFVLAANAIETPKLLLMSVSDKFPQGIA 300 AVVY+LEHD +GRI A HYYDWNK SHRITAQTFVLAANAIETPKLLLMS SDKFP GI Sbjct: 244 AVVYKLEHDAQGRIVAAHYYDWNKTSHRITAQTFVLAANAIETPKLLLMSTSDKFPHGIG 303 Query: 301 NARDNVGRNLCDHPAIGVTFDVDEEIWPGRGPVSPCSIGQFRDGDFRAEHAPFRIDISNA 360 NARDNVGRNLCDHPAIGVTFDVDEEIWPGRGPVSPCSIGQFRDG+FR EHAPFR+DISNA Sbjct: 304 NARDNVGRNLCDHPAIGVTFDVDEEIWPGRGPVSPCSIGQFRDGEFRREHAPFRLDISNA 363 Query: 361 SQVASVTKEVLAEGYFGKRLEEQILFRAARRLSIKNALEQLPDRNNRVTLGDKKDELGLP 420 SQVA+VTKEVL EGYFGK+L+EQ+ FRAARRLSIKNALEQLP+ +NRVTL KD LGLP Sbjct: 364 SQVAAVTKEVLEEGYFGKKLQEQVRFRAARRLSIKNALEQLPNPDNRVTLSSNKDALGLP 423 Query: 421 VPALYWNVDDYVVKGTEKTRAAYDAIAARLGATNIKHSKSGAFSNRQHITGTLSMGLDPA 480 PAL+W+VDDYV KGTEKTR YDAIAA+LGATNI+HSKSG FSNRQHI GTLSMGLDPA Sbjct: 424 TPALFWDVDDYVQKGTEKTRECYDAIAAKLGATNIRHSKSGKFSNRQHIIGTLSMGLDPA 483 Query: 481 TSVTDAWGRAHDHENLFMVGTGVMPTVGTCNVTLTAMALALRTADKIIEESRHA 534 TSVTD WGRAHDHENLFMVGTGVMPTVGTCNVTLTAMALALRTADKI++E++H Sbjct: 484 TSVTDVWGRAHDHENLFMVGTGVMPTVGTCNVTLTAMALALRTADKILQETQHG 537 >ref|YP_004118240.1| FAD dependent oxidoreductase [Pantoea sp. At-9b] gb|ADU71684.1| FAD dependent oxidoreductase [Pantoea sp. At-9b] Length = 534 Score = 979 bits (2531), Expect = 0.0, Method: Composition-based stats. Identities = 460/534 (86%), Positives = 499/534 (93%) Query: 1 MSNPNSADVVVIGAGVTGALLATRLAKTGKSVLLLESGPRMGRDQLVERFRSSAFKSDFM 60 M+N NSADVVVIGAGV G+LLATRLAK GKSVLLLESGP++GRD+LVERFR+SAFKSDFM Sbjct: 1 MNNKNSADVVVIGAGVNGSLLATRLAKAGKSVLLLESGPKVGRDELVERFRASAFKSDFM 60 Query: 61 APYPYSPLAPHPRYTPEPNGYLQQKGPHAFNAQYIRMFGGTSWHWAAQLWRYVPNDFRQH 120 +PYP+S LAP PRYTPEPN YL Q GPH F AQYIRMFGGTSWHWAAQLWR+VPNDFRQ Sbjct: 61 SPYPFSELAPQPRYTPEPNDYLHQLGPHPFAAQYIRMFGGTSWHWAAQLWRFVPNDFRQQ 120 Query: 121 SLYGVGKDWPISYDDLEDYYYQAEVIAGVGGSPESGSPRKHPFPMERVPASWLQQRVTAR 180 + YGVGKDWP YD+LE YYY+AEVIAGVGGSP++GSPR P+PMERVPASWLQQRVTAR Sbjct: 121 TQYGVGKDWPFGYDELEPYYYEAEVIAGVGGSPDNGSPRSKPYPMERVPASWLQQRVTAR 180 Query: 181 LAPEFTVLDDSTGRNSRNYDGRPACCGNNNCMPLCPIDAQYHGGLAAQQAEDSGVQVITE 240 LAP+FTVLDDSTGRNS +YDGRPACCGNNNCMPLCPIDAQYHGGLAAQQA+DSGVQVITE Sbjct: 181 LAPDFTVLDDSTGRNSHSYDGRPACCGNNNCMPLCPIDAQYHGGLAAQQAQDSGVQVITE 240 Query: 241 AVVYRLEHDEKGRIAAVHYYDWNKVSHRITAQTFVLAANAIETPKLLLMSVSDKFPQGIA 300 AVVY+LEHD +G+I A +YYDWNKVSHR+TA+TFVLAANAIETPKLLLMSVSDKFPQGIA Sbjct: 241 AVVYQLEHDAQGKIVAANYYDWNKVSHRVTAETFVLAANAIETPKLLLMSVSDKFPQGIA 300 Query: 301 NARDNVGRNLCDHPAIGVTFDVDEEIWPGRGPVSPCSIGQFRDGDFRAEHAPFRIDISNA 360 NARDNVGRNLCDHPAIGVTFDVDEEIWPGRGPVSPCSIGQFRDGDFR EHAPFRIDISNA Sbjct: 301 NARDNVGRNLCDHPAIGVTFDVDEEIWPGRGPVSPCSIGQFRDGDFRREHAPFRIDISNA 360 Query: 361 SQVASVTKEVLAEGYFGKRLEEQILFRAARRLSIKNALEQLPDRNNRVTLGDKKDELGLP 420 SQVA+VTKEVLAEG+FGK+L+E+I FRAARRLSIKNA+EQLPD NNRVTL KD LGLP Sbjct: 361 SQVAAVTKEVLAEGFFGKKLQEEIRFRAARRLSIKNAMEQLPDPNNRVTLSSNKDALGLP 420 Query: 421 VPALYWNVDDYVVKGTEKTRAAYDAIAARLGATNIKHSKSGAFSNRQHITGTLSMGLDPA 480 PALYWNV DY +KGTEKTRA YDAIAA+LG T+I+HSKSG FSNRQHITGTLSMGLDPA Sbjct: 421 TPALYWNVSDYELKGTEKTRACYDAIAAKLGGTHIQHSKSGKFSNRQHITGTLSMGLDPA 480 Query: 481 TSVTDAWGRAHDHENLFMVGTGVMPTVGTCNVTLTAMALALRTADKIIEESRHA 534 TSVTDAWGRAHDH+NLFMVGTGVMPTVGTCNVTLTAMALALRTADKI++E++H Sbjct: 481 TSVTDAWGRAHDHQNLFMVGTGVMPTVGTCNVTLTAMALALRTADKILQETQHG 534 >ref|YP_004211775.1| FAD dependent oxidoreductase [Rahnella sp. Y9602] gb|ADW72648.1| FAD dependent oxidoreductase [Rahnella sp. Y9602] Length = 533 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 324/528 (61%), Positives = 408/528 (77%), Gaps = 1/528 (0%) Query: 1 MSNPNSADVVVIGAGVTGALLATRLAKTGKSVLLLESGPRMGRDQLVERFRSSAFKSDFM 60 MS SADVVVIG+G+ G+L+A RLAK G SV++LESGPR+ R L E FR+S K DFM Sbjct: 1 MSEQLSADVVVIGSGICGSLVAQRLAKQGISVIILESGPRIDRGTLTENFRNSPRKKDFM 60 Query: 61 APYPYSPLAPHPRYTPEPNGYLQQKGPHAFNAQYIRMFGGTSWHWAAQLWRYVPNDFRQH 120 +PYPYS +PHP Y PE N YLQQ+GP+ F A+YIR+ GGT+WHWAAQ WR +PND + Sbjct: 61 SPYPYSDWSPHPVYKPEDNDYLQQQGPYPFPAEYIRIMGGTTWHWAAQAWRVLPNDMKIK 120 Query: 121 SLYGVGKDWPISYDDLEDYYYQAEVIAGVGGSPESGSPRKHPFPMERVPASWLQQRVTAR 180 +LYGVG+DWP+SY++LE +YY+AEV GV G+P +GSPR PFPME V SWLQQR R Sbjct: 121 TLYGVGRDWPLSYEELEPFYYEAEVKMGVSGAPNNGSPRSQPFPMEPVAESWLQQRFRER 180 Query: 181 LAPE-FTVLDDSTGRNSRNYDGRPACCGNNNCMPLCPIDAQYHGGLAAQQAEDSGVQVIT 239 LAP + V+ ++T RNSRNYDGRPACCGNNNCMP+CPIDAQYHGG+AAQ AE +G ++IT Sbjct: 181 LAPGGYEVIVNTTARNSRNYDGRPACCGNNNCMPICPIDAQYHGGIAAQAAEAAGAKLIT 240 Query: 240 EAVVYRLEHDEKGRIAAVHYYDWNKVSHRITAQTFVLAANAIETPKLLLMSVSDKFPQGI 299 AVVYRLEHDEKGRI A HYYD +K H++TA+ FVLAAN IE+PKLLL+S SDK+P G+ Sbjct: 241 SAVVYRLEHDEKGRIVAAHYYDPDKGEHKVTAKNFVLAANGIESPKLLLISASDKYPDGL 300 Query: 300 ANARDNVGRNLCDHPAIGVTFDVDEEIWPGRGPVSPCSIGQFRDGDFRAEHAPFRIDISN 359 AN+ VGR+L DHP+ +TF+ +E +W GRGP+SP SI RDGDFR ++A FRIDI+N Sbjct: 301 ANSSGTVGRHLMDHPSNSLTFETEEPLWAGRGPMSPASINSLRDGDFRKDYASFRIDIAN 360 Query: 360 ASQVASVTKEVLAEGYFGKRLEEQILFRAARRLSIKNALEQLPDRNNRVTLGDKKDELGL 419 +SQV SVT+++LAEG +G L+ +I RA+ + S+KN +EQLP+ +NR+ L DKKD+LG+ Sbjct: 361 SSQVQSVTQDLLAEGVYGISLDNEIRRRASHQTSLKNVMEQLPNYDNRIILSDKKDKLGI 420 Query: 420 PVPALYWNVDDYVVKGTEKTRAAYDAIAARLGATNIKHSKSGAFSNRQHITGTLSMGLDP 479 P PA +++DDYV +G + Y IA +G TN++ SK G + N QHITGT+SMG DP Sbjct: 421 PKPAAIYHMDDYVHRGMARAVKEYTEIARLMGGTNLRFSKPGVYGNNQHITGTMSMGHDP 480 Query: 480 ATSVTDAWGRAHDHENLFMVGTGVMPTVGTCNVTLTAMALALRTADKI 527 SV DA+GR HDHENLF+ TGVMPT T N TLTA+ALALRTAD + Sbjct: 481 KDSVVDAFGRTHDHENLFITSTGVMPTSATVNSTLTAVALALRTADHL 528