BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0314.p (167 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775091.1| hypothetical protein Hsero_1670 [Herbaspiril... 274 4e-72 ref|YP_004118239.1| hypothetical protein Pat9b_5527 [Pantoea sp.... 179 1e-43 ref|YP_003522399.1| hypothetical Protein PANA_4104 [Pantoea anan... 172 2e-41 dbj|BAK14053.1| hypothetical protein PAJ_p0186 [Pantoea ananatis... 162 2e-38 ref|YP_004118965.1| hypothetical protein Pat9b_4433 [Pantoea sp.... 72 2e-11 >ref|YP_003775091.1| hypothetical protein Hsero_1670 [Herbaspirillum seropedicae SmR1] gb|ADJ63183.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 167 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 155/167 (92%), Positives = 160/167 (95%) Query: 1 MTHTSRRRVLKVVGLMTGASAAGLFGALPRLVTAQNNATMAPLDDFIQVSQQLTERKDLS 60 MTHTSRRRVLKVVGLMTGASAAGLFGALPRLVTAQNNAT APLDDFIQVSQQLTERKDLS Sbjct: 1 MTHTSRRRVLKVVGLMTGASAAGLFGALPRLVTAQNNATTAPLDDFIQVSQQLTERKDLS 60 Query: 61 PKLGTALLLALSKTEKDLASRLQSLKGLLQAQPALLQAERLAFPAEQGDSEKLARIILGA 120 P+LG ALLLAL KTEKDLASRL +LKGLLQAQPALLQAERLAFPAE GDSEKLAR+ILGA Sbjct: 61 PRLGAALLLALGKTEKDLASRLPALKGLLQAQPALLQAERLAFPAEHGDSEKLARVILGA 120 Query: 121 WYDGVVGKGKSAQYVTYINTLSNGLVSGKLVPPSFSYGPCGSWSRQP 167 WY+GVVGKGK AQYVTY+NTLSN LVSGKLVPPSFSYGPCGSWSRQP Sbjct: 121 WYEGVVGKGKQAQYVTYLNTLSNTLVSGKLVPPSFSYGPCGSWSRQP 167 >ref|YP_004118239.1| hypothetical protein Pat9b_5527 [Pantoea sp. At-9b] gb|ADU71683.1| hypothetical protein Pat9b_5527 [Pantoea sp. At-9b] Length = 167 Score = 179 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 98/167 (58%), Positives = 120/167 (71%) Query: 1 MTHTSRRRVLKVVGLMTGASAAGLFGALPRLVTAQNNATMAPLDDFIQVSQQLTERKDLS 60 M H SRRRVLK+ GL+ SAAG LPRL AQ A A DFIQVSQ LT++++L+ Sbjct: 1 MKHYSRRRVLKMAGLVVITSAAGHLLPLPRLNAAQTLANAATQADFIQVSQWLTQQENLN 60 Query: 61 PKLGTALLLALSKTEKDLASRLQSLKGLLQAQPALLQAERLAFPAEQGDSEKLARIILGA 120 + ALL+AL++T+KD + L LK LLQ+QP LLQ + L F A SEKLA+ ILG Sbjct: 61 SAVAHALLIALNQTQKDFTAGLTQLKTLLQSQPGLLQQDHLTFAASDAASEKLAKAILGG 120 Query: 121 WYDGVVGKGKSAQYVTYINTLSNGLVSGKLVPPSFSYGPCGSWSRQP 167 WY+GVVGKG A YVTY+NTL+N LV+ KLVPPSFSYG CGSW++QP Sbjct: 121 WYNGVVGKGIHALYVTYVNTLANQLVNDKLVPPSFSYGECGSWAQQP 167 >ref|YP_003522399.1| hypothetical Protein PANA_4104 [Pantoea ananatis LMG 20103] gb|ADD79271.1| Hypothetical Protein PANA_4104 [Pantoea ananatis LMG 20103] Length = 168 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 96/167 (57%), Positives = 115/167 (68%) Query: 1 MTHTSRRRVLKVVGLMTGASAAGLFGALPRLVTAQNNATMAPLDDFIQVSQQLTERKDLS 60 M H SRRRVLK+VGL+ SAAG L RL AQ +A LD F+QVSQQLT++ +L+ Sbjct: 2 MNHYSRRRVLKMVGLVAVTSAAGHLLPLARLNAAQPDAQTDELDIFMQVSQQLTQQDELN 61 Query: 61 PKLGTALLLALSKTEKDLASRLQSLKGLLQAQPALLQAERLAFPAEQGDSEKLARIILGA 120 +G AL LS+T+K+ +S L L LL QP LLQ ERL F S KLA IL Sbjct: 62 ETVGAALYDTLSQTQKNFSSALLRLSNLLTHQPDLLQQERLPFAESDAGSAKLAGTILSG 121 Query: 121 WYDGVVGKGKSAQYVTYINTLSNGLVSGKLVPPSFSYGPCGSWSRQP 167 WY GVVGKGK+A+Y+TYINTL+N +V+ KLVPPSFSYG CGSWS QP Sbjct: 122 WYTGVVGKGKNARYITYINTLANQIVNDKLVPPSFSYGVCGSWSSQP 168 >dbj|BAK14053.1| hypothetical protein PAJ_p0186 [Pantoea ananatis AJ13355] Length = 167 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 93/167 (55%), Positives = 114/167 (68%) Query: 1 MTHTSRRRVLKVVGLMTGASAAGLFGALPRLVTAQNNATMAPLDDFIQVSQQLTERKDLS 60 M H SRRRVLK+VGL+ SAAG L RL AQ +A LD F+Q+SQQLT++ +L+ Sbjct: 1 MNHYSRRRVLKMVGLVAVTSAAGHLLPLARLNAAQPDAQTDELDIFMQISQQLTQQDELN 60 Query: 61 PKLGTALLLALSKTEKDLASRLQSLKGLLQAQPALLQAERLAFPAEQGDSEKLARIILGA 120 +G AL LS+ +K+ +S L L LL QP LLQ ERL F S KLA IL Sbjct: 61 ETVGAALYDTLSQIQKNFSSALLRLSSLLAHQPDLLQQERLPFAESDAGSAKLASTILSG 120 Query: 121 WYDGVVGKGKSAQYVTYINTLSNGLVSGKLVPPSFSYGPCGSWSRQP 167 WY GVVGKGK+A+Y+TYINTL+N +V+ KLVPPSFSYG CGSW+ QP Sbjct: 121 WYTGVVGKGKNARYITYINTLANQIVNDKLVPPSFSYGVCGSWASQP 167 >ref|YP_004118965.1| hypothetical protein Pat9b_4433 [Pantoea sp. At-9b] gb|ADU72409.1| conserved hypothetical protein [Pantoea sp. At-9b] Length = 188 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 11/168 (6%) Query: 2 THTSRRRVLKVVGLMTGASAAGLFGALPRLVTAQNNATMAPLDDFIQVSQQLTERKDLSP 61 + SRRR+L+ +G + +A + A P +A ++++ F ++S LT + L Sbjct: 29 SRVSRRRLLQGMGAL---AALTVIPAFPSYASASDDSS------FTKLSTLLTGKSQLPE 79 Query: 62 KLGTALLLALSKTEKDLASRLQSLKGLLQAQPALLQ--AERLAFPAEQGDSEKLARIILG 119 LL A S+ + +S+ L+ + + +LA D L IL Sbjct: 80 NFTRVLLAAFSRIDSSFSSKTSRLQQWIDHNTVSANEISSKLAADPSVADLAHLPTDILT 139 Query: 120 AWYDGVVGKGKSAQYVTYINTLSNGLVSGKLVPPSFSYGPCGSWSRQP 167 WY GVVGKG +A V YI L+N +V+ KL PP+++YG GSW+ QP Sbjct: 140 GWYLGVVGKGDNAICVAYIEALANQVVADKLRPPTYAYGAYGSWAAQP 187