BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0310.p (235 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775087.1| branched-chain amino acid ABC transporter AT... 438 e-121 ref|ZP_04943377.1| ABC transporter [Burkholderia cenocepacia PC1... 371 e-101 ref|YP_371413.1| branched chain amino acid ABC transporter ATPas... 371 e-101 ref|YP_001115822.1| ABC transporter related [Burkholderia vietna... 371 e-101 ref|YP_002234845.1| putative amino acid ABC transporter ATP-bind... 371 e-101 >ref|YP_003775087.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ63179.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 235 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 231/235 (98%), Positives = 232/235 (98%) Query: 1 MMLQFDKVHTHYGAIEALHGVSLTVEKGEIVTLIGANGAGKTTLLMTLCGRPRASSGRVI 60 MMLQFDKVHTHYGAIEALHGVSL VEKGEIVTLIGANGAGKTTLLMTLCGRPRASSGRVI Sbjct: 1 MMLQFDKVHTHYGAIEALHGVSLNVEKGEIVTLIGANGAGKTTLLMTLCGRPRASSGRVI 60 Query: 61 FEGQDITQLPTHEIMRRGLAISPEGRRVFPSLTVLENLKMGAFFASNEDIEQGIEYVFGL 120 FEGQDITQL THEIMRRGLAISPEGRRVFPSLTVLENLKMGAFFASNE IEQGIEYVFGL Sbjct: 61 FEGQDITQLQTHEIMRRGLAISPEGRRVFPSLTVLENLKMGAFFASNEAIEQGIEYVFGL 120 Query: 121 FPRLKERAAQRAGTMSGGEQQMLAIGRALMSKPRLLLLDEPTLGLAPLVIAQIFEIIRTI 180 FPRLKERAAQRAGTMSGGEQQMLAIGRALMSKPRLLLLDEPTLGLAPLVIAQIF+IIRTI Sbjct: 121 FPRLKERAAQRAGTMSGGEQQMLAIGRALMSKPRLLLLDEPTLGLAPLVIAQIFDIIRTI 180 Query: 181 RESGVTVFLVEQNANKALGVADRGYVLENGHVVMSDTGANLLANSDVRKAYLGHG 235 RESGVTVFLVEQNANKALGVADRGYVLENGHVVMSDTGANLLANSDVRKAYLGHG Sbjct: 181 RESGVTVFLVEQNANKALGVADRGYVLENGHVVMSDTGANLLANSDVRKAYLGHG 235 >ref|ZP_04943377.1| ABC transporter [Burkholderia cenocepacia PC184] gb|EAY66548.1| ABC transporter [Burkholderia cenocepacia PC184] Length = 234 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 191/233 (81%), Positives = 214/233 (91%) Query: 1 MMLQFDKVHTHYGAIEALHGVSLTVEKGEIVTLIGANGAGKTTLLMTLCGRPRASSGRVI 60 MML+ ++VHTHYGA+EAL GVS+ V KGEIVTLIG+NGAGKTTL+MT+CG PRASSGRV+ Sbjct: 1 MMLKLEQVHTHYGAVEALAGVSIEVNKGEIVTLIGSNGAGKTTLMMTVCGTPRASSGRVL 60 Query: 61 FEGQDITQLPTHEIMRRGLAISPEGRRVFPSLTVLENLKMGAFFASNEDIEQGIEYVFGL 120 FEG DIT + TH+IMR+G+AISPEGRRVFPSLTVLENLKMG FFAS +I+ GIE+VF L Sbjct: 61 FEGNDITAMSTHQIMRQGMAISPEGRRVFPSLTVLENLKMGGFFASRHEIDDGIEHVFKL 120 Query: 121 FPRLKERAAQRAGTMSGGEQQMLAIGRALMSKPRLLLLDEPTLGLAPLVIAQIFEIIRTI 180 FPRLKERA QRAGTMSGGEQQMLAIGRALMSKPRLLLLDEPTLGLAPLVIAQIF+IIRTI Sbjct: 121 FPRLKERATQRAGTMSGGEQQMLAIGRALMSKPRLLLLDEPTLGLAPLVIAQIFDIIRTI 180 Query: 181 RESGVTVFLVEQNANKALGVADRGYVLENGHVVMSDTGANLLANSDVRKAYLG 233 R+ GVTVFLVEQNANKALGVADRGYVLE G VV++DTGANLLAN +++AYLG Sbjct: 181 RDEGVTVFLVEQNANKALGVADRGYVLETGRVVLADTGANLLANDRIKQAYLG 233 >ref|YP_371413.1| branched chain amino acid ABC transporter ATPase [Burkholderia sp. 383] gb|ABB10769.1| L-isoleucine ABC transporter ATP-binding protein / L-valine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein [Burkholderia sp. 383] Length = 233 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 191/232 (82%), Positives = 215/232 (92%) Query: 2 MLQFDKVHTHYGAIEALHGVSLTVEKGEIVTLIGANGAGKTTLLMTLCGRPRASSGRVIF 61 ML+ ++VHTHYGA+EAL GVS+ V KGEIVTLIG+NGAGKTTL+MT+CG PRASSGRV+F Sbjct: 1 MLKLEQVHTHYGAVEALAGVSIEVNKGEIVTLIGSNGAGKTTLMMTVCGTPRASSGRVLF 60 Query: 62 EGQDITQLPTHEIMRRGLAISPEGRRVFPSLTVLENLKMGAFFASNEDIEQGIEYVFGLF 121 EG+DIT + TH+IMR+G+AISPEGRRVFPSLTVLENLKMG FFAS +I+ GIE+VF LF Sbjct: 61 EGKDITAMSTHQIMRQGMAISPEGRRVFPSLTVLENLKMGGFFASRHEIDDGIEHVFKLF 120 Query: 122 PRLKERAAQRAGTMSGGEQQMLAIGRALMSKPRLLLLDEPTLGLAPLVIAQIFEIIRTIR 181 PRLKERAAQRAGTMSGGEQQMLAIGRALMSKPRLLLLDEPTLGLAPLVIAQIF+IIRTIR Sbjct: 121 PRLKERAAQRAGTMSGGEQQMLAIGRALMSKPRLLLLDEPTLGLAPLVIAQIFDIIRTIR 180 Query: 182 ESGVTVFLVEQNANKALGVADRGYVLENGHVVMSDTGANLLANSDVRKAYLG 233 + GVTVFLVEQNANKALGVADRGYVLE G VV++DTGANLLAN +++AYLG Sbjct: 181 DEGVTVFLVEQNANKALGVADRGYVLETGRVVLADTGANLLANDRIKQAYLG 232 >ref|YP_001115822.1| ABC transporter related [Burkholderia vietnamiensis G4] gb|ABO56357.1| L-leucine ABC transporter ATP-binding protein / L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein [Burkholderia vietnamiensis G4] Length = 233 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 191/232 (82%), Positives = 214/232 (92%) Query: 2 MLQFDKVHTHYGAIEALHGVSLTVEKGEIVTLIGANGAGKTTLLMTLCGRPRASSGRVIF 61 ML+ ++VHTHYGA+EAL GVS+ V KGEIVTLIG+NGAGKTTL+MT+CG PRASSGRV+F Sbjct: 1 MLKLERVHTHYGAVEALAGVSIEVNKGEIVTLIGSNGAGKTTLMMTVCGTPRASSGRVLF 60 Query: 62 EGQDITQLPTHEIMRRGLAISPEGRRVFPSLTVLENLKMGAFFASNEDIEQGIEYVFGLF 121 EG DIT + TH+IMR+G+AISPEGRRVFPSLTVLENLKMG FFAS +I+ GIE+VF LF Sbjct: 61 EGNDITAMSTHQIMRQGMAISPEGRRVFPSLTVLENLKMGGFFASRHEIDDGIEHVFKLF 120 Query: 122 PRLKERAAQRAGTMSGGEQQMLAIGRALMSKPRLLLLDEPTLGLAPLVIAQIFEIIRTIR 181 PRLKERAAQRAGTMSGGEQQMLAIGRALMSKPRLLLLDEPTLGLAPLVIAQIF+IIRTIR Sbjct: 121 PRLKERAAQRAGTMSGGEQQMLAIGRALMSKPRLLLLDEPTLGLAPLVIAQIFDIIRTIR 180 Query: 182 ESGVTVFLVEQNANKALGVADRGYVLENGHVVMSDTGANLLANSDVRKAYLG 233 + GVTVFLVEQNANKALGVADRGYVLE G VV++DTGANLLAN +++AYLG Sbjct: 181 DEGVTVFLVEQNANKALGVADRGYVLETGRVVLADTGANLLANDRIKQAYLG 232 >ref|YP_002234845.1| putative amino acid ABC transporter ATP-binding protein [Burkholderia cenocepacia J2315] emb|CAR56104.1| putative amino acid ABC transporter ATP-binding protein [Burkholderia cenocepacia J2315] Length = 233 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 191/232 (82%), Positives = 214/232 (92%) Query: 2 MLQFDKVHTHYGAIEALHGVSLTVEKGEIVTLIGANGAGKTTLLMTLCGRPRASSGRVIF 61 ML+ ++VHTHYGA+EAL GVS+ V KGEIVTLIG+NGAGKTTL+MT+CG PRASSGRV+F Sbjct: 1 MLKLEQVHTHYGAVEALAGVSIEVNKGEIVTLIGSNGAGKTTLMMTVCGTPRASSGRVLF 60 Query: 62 EGQDITQLPTHEIMRRGLAISPEGRRVFPSLTVLENLKMGAFFASNEDIEQGIEYVFGLF 121 EG DIT + TH+IMR+G+AISPEGRRVFPSLTVLENLKMG FFAS +I+ GIE+VF LF Sbjct: 61 EGNDITAMSTHQIMRQGMAISPEGRRVFPSLTVLENLKMGGFFASRHEIDDGIEHVFKLF 120 Query: 122 PRLKERAAQRAGTMSGGEQQMLAIGRALMSKPRLLLLDEPTLGLAPLVIAQIFEIIRTIR 181 PRLKERAAQRAGTMSGGEQQMLAIGRALMSKPRLLLLDEPTLGLAPLVIAQIF+IIRTIR Sbjct: 121 PRLKERAAQRAGTMSGGEQQMLAIGRALMSKPRLLLLDEPTLGLAPLVIAQIFDIIRTIR 180 Query: 182 ESGVTVFLVEQNANKALGVADRGYVLENGHVVMSDTGANLLANSDVRKAYLG 233 + GVTVFLVEQNANKALGVADRGYVLE G VV++DTGANLLAN +++AYLG Sbjct: 181 DEGVTVFLVEQNANKALGVADRGYVLETGRVVLADTGANLLANDRIKQAYLG 232