BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0309.p (263 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775086.1| branched-chain amino acid ABC transporter AT... 289 3e-76 gb|EGP43785.1| leucine/isoleucine/valine transporter ATP-binding... 238 8e-61 ref|YP_296522.1| leucine/isoleucine/valine transporter ATP-bindi... 237 1e-60 ref|YP_003979346.1| high-affinity branched-chain amino acid tran... 237 2e-60 ref|YP_004686305.1| HAAT family ABC transporter ATP-binding prot... 235 4e-60 >ref|YP_003775086.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ63178.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 258 Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 147/148 (99%), Positives = 148/148 (100%) Query: 116 QVNTNLLSGLLKTPSYRKSEQEALQRAAYWLDQLGLTALANREAGTLSYGLQRRVEIARC 175 QVNTNLLSGLLKTP+YRKSEQEALQRAAYWLDQLGLTALANREAGTLSYGLQRRVEIARC Sbjct: 111 QVNTNLLSGLLKTPAYRKSEQEALQRAAYWLDQLGLTALANREAGTLSYGLQRRVEIARC 170 Query: 176 MITKPRLLLLDEPAAGLNPQEKQELSQLIDRLRREHGVAVLLIEHDMSLIMGISDRILVM 235 MITKPRLLLLDEPAAGLNPQEKQELSQLIDRLRREHGVAVLLIEHDMSLIMGISDRILVM Sbjct: 171 MITKPRLLLLDEPAAGLNPQEKQELSQLIDRLRREHGVAVLLIEHDMSLIMGISDRILVM 230 Query: 236 EHGKPIVTGTPEQVRSDERVIKAYLGEE 263 EHGKPIVTGTPEQVRSDERVIKAYLGEE Sbjct: 231 EHGKPIVTGTPEQVRSDERVIKAYLGEE 258 >gb|EGP43785.1| leucine/isoleucine/valine transporter ATP-binding subunit [Achromobacter xylosoxidans AXX-A] Length = 255 Score = 238 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 120/148 (81%), Positives = 131/148 (88%) Query: 116 QVNTNLLSGLLKTPSYRKSEQEALQRAAYWLDQLGLTALANREAGTLSYGLQRRVEIARC 175 QV + LL GLLKT SYR+SE +AL RAA WLD +GL ANREAG L+YG QRR+EIARC Sbjct: 108 QVESRLLPGLLKTKSYRQSETDALSRAAQWLDFMGLREYANREAGNLAYGHQRRLEIARC 167 Query: 176 MITKPRLLLLDEPAAGLNPQEKQELSQLIDRLRREHGVAVLLIEHDMSLIMGISDRILVM 235 MITKPRLL+LDEPAAGLNPQEK++L LID+LRRE GVAVLLIEHDMSLIMGISDRILVM Sbjct: 168 MITKPRLLMLDEPAAGLNPQEKRDLQSLIDQLRREFGVAVLLIEHDMSLIMGISDRILVM 227 Query: 236 EHGKPIVTGTPEQVRSDERVIKAYLGEE 263 EHGKPI TGTPEQVR+DERVIKAYLGEE Sbjct: 228 EHGKPITTGTPEQVRNDERVIKAYLGEE 255 >ref|YP_296522.1| leucine/isoleucine/valine transporter ATP-binding subunit [Ralstonia eutropha JMP134] gb|AAZ61678.1| L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein / L-valine ABC transporter ATP-binding protein [Ralstonia eutropha JMP134] Length = 261 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 114/148 (77%), Positives = 135/148 (91%) Query: 116 QVNTNLLSGLLKTPSYRKSEQEALQRAAYWLDQLGLTALANREAGTLSYGLQRRVEIARC 175 QV +L GL TP+YR++E+EAL+RAA WL+++GLT +ANREAGTLSYG QRR+EIARC Sbjct: 114 QVQAGILRGLFATPAYRRAEREALERAAEWLERMGLTKVANREAGTLSYGHQRRLEIARC 173 Query: 176 MITKPRLLLLDEPAAGLNPQEKQELSQLIDRLRREHGVAVLLIEHDMSLIMGISDRILVM 235 MITKPRLL+LDEPAAGLNPQEK ELSQLID+LR+E+G+AVLLIEHDMSL+MG+SDRILVM Sbjct: 174 MITKPRLLMLDEPAAGLNPQEKIELSQLIDQLRKEYGIAVLLIEHDMSLVMGVSDRILVM 233 Query: 236 EHGKPIVTGTPEQVRSDERVIKAYLGEE 263 EHGKPIV G PE+VR+D RVIKAYLGE+ Sbjct: 234 EHGKPIVIGKPEEVRNDPRVIKAYLGED 261 >ref|YP_003979346.1| high-affinity branched-chain amino acid transport ATP-binding protein BRAF 4 [Achromobacter xylosoxidans A8] gb|ADP16631.1| high-affinity branched-chain amino acid transport ATP-binding protein BRAF 4 [Achromobacter xylosoxidans A8] Length = 255 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 119/148 (80%), Positives = 130/148 (87%) Query: 116 QVNTNLLSGLLKTPSYRKSEQEALQRAAYWLDQLGLTALANREAGTLSYGLQRRVEIARC 175 QV + LL GLLK SYR+SE +AL RAA WLD +GL ANREAG L+YG QRR+EIARC Sbjct: 108 QVESRLLPGLLKLKSYRQSETDALARAAQWLDFMGLREFANREAGNLAYGHQRRLEIARC 167 Query: 176 MITKPRLLLLDEPAAGLNPQEKQELSQLIDRLRREHGVAVLLIEHDMSLIMGISDRILVM 235 MITKPRLL+LDEPAAGLNPQEK++L LID+LRRE GVAVLLIEHDMSLIMGISDRILVM Sbjct: 168 MITKPRLLMLDEPAAGLNPQEKRDLQSLIDQLRREFGVAVLLIEHDMSLIMGISDRILVM 227 Query: 236 EHGKPIVTGTPEQVRSDERVIKAYLGEE 263 EHGKPI TGTPEQVR+DERVIKAYLGEE Sbjct: 228 EHGKPITTGTPEQVRNDERVIKAYLGEE 255 >ref|YP_004686305.1| HAAT family ABC transporter ATP-binding protein [Cupriavidus necator N-1] gb|AEI77824.1| ABC transport system ATP-binding protein HAAT family [Cupriavidus necator N-1] Length = 263 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 114/148 (77%), Positives = 134/148 (90%) Query: 116 QVNTNLLSGLLKTPSYRKSEQEALQRAAYWLDQLGLTALANREAGTLSYGLQRRVEIARC 175 QV + +L GL TP+YR++E+EAL+RAA WL+++GLT +ANREAGTLSYG QRR+EIARC Sbjct: 116 QVQSGILRGLFATPAYRRAEREALERAAVWLERMGLTKVANREAGTLSYGHQRRLEIARC 175 Query: 176 MITKPRLLLLDEPAAGLNPQEKQELSQLIDRLRREHGVAVLLIEHDMSLIMGISDRILVM 235 MITKPRLL+LDEPAAGLNPQEK EL QLID+LRRE G++VLLIEHDMSL+MG+SDRILVM Sbjct: 176 MITKPRLLMLDEPAAGLNPQEKIELQQLIDQLRREFGISVLLIEHDMSLVMGVSDRILVM 235 Query: 236 EHGKPIVTGTPEQVRSDERVIKAYLGEE 263 EHGKPIV G PEQVR+D RVIKAYLGE+ Sbjct: 236 EHGKPIVIGKPEQVRNDPRVIKAYLGED 263