BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0302.p (298 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07380523.1| Endonuclease/exonuclease/phosphatase [Pantoea... 202 5e-50 ref|YP_001713690.1| hypothetical protein ABAYE1809 [Acinetobacte... 147 3e-33 ref|ZP_07741747.1| endonuclease/exonuclease/phosphatase [Vibrio ... 138 1e-30 ref|YP_735571.1| endonuclease/exonuclease/phosphatase [Shewanell... 129 4e-28 ref|YP_002152560.1| endonuclease/exonuclease/phosphatase [Proteu... 120 2e-25 >ref|ZP_07380523.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. aB] gb|EFM18237.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. aB] Length = 306 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 102/299 (34%), Positives = 171/299 (57%), Gaps = 7/299 (2%) Query: 2 KLTFVWWNTSLSRAAAPNRSTTLEQSIASDLLALMCHDIRPDAICLGEISTEDIALLEDV 61 K+ WWNTSLS + N+ST + + ++ + ++ + DAICL E+S D+ + +V Sbjct: 6 KIAIGWWNTSLSPHSKENKSTEEHKQYVALIIIRLLNERKLDAICLCEVSQLDVEFISEV 65 Query: 62 CATHGYGVIDGIRPVGRTSFDTCVLFRTDTLIALDNKDLVAQ---KGQRYFKVAQRFDFG 118 G+ V DG+ G+ FD C++FR++ + L + ++++ G R + Q+ +F Sbjct: 66 VGG-GFSVYDGVYREGKKKFDICIVFRSE-VFQLADSTVISKPHPTGNRIY-AGQKVEFV 122 Query: 119 VCDNETIIHLFVSHWPSRIHTSEDHPHRDLLGIRLRDAVKETRFEETQQHVIILGDFNDE 178 + + + ++ LF+ HW SR++ ED P + LG+ LR AV + + VI+LGDFN+E Sbjct: 123 INETQELLTLFLVHWSSRLYDYEDSPKKAELGMLLRTAVSDCFEQAANSKVIVLGDFNEE 182 Query: 179 PFDAALADHLMATRDRALAAKKSHLLYNPFWRLLGCPIPYRQTSQEMSPYSGSCYYRSGE 238 PF+ ++ HL ATRD AL ++ LLYNPFWR + S + G+ YY++ Sbjct: 183 PFNESITYHLAATRDIALVKRRPGLLYNPFWRHM-IYSKMHPNSDTSGVHGGTYYYKNDN 241 Query: 239 SARWRTFDQIIFSPSFLGKTSWHLCEDLVQILDFPFFTDIVRRAKHSFDHLPVIAVVEK 297 ++W+TFDQ++FS F+ +WHL E + P F + + FDHLP+I+V+E+ Sbjct: 242 FSKWKTFDQMMFSSDFILGKTWHLNEGETVVFSDPEFLQYINNSSSKFDHLPIISVIER 300 >ref|YP_001713690.1| hypothetical protein ABAYE1809 [Acinetobacter baumannii AYE] ref|YP_002319451.1| endonuclease/exonuclease/phosphatase [Acinetobacter baumannii AB0057] ref|YP_002325598.1| Endonuclease/Exonuclease/phosphatase family protein [Acinetobacter baumannii AB307-0294] ref|ZP_08435363.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter baumannii 6013150] ref|ZP_08438174.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter baumannii 6013113] emb|CAM86693.1| hypothetical protein; putative Endonuclease/Exonuclease/phosphatase domain [Acinetobacter baumannii AYE] gb|ACJ41468.1| endonuclease/exonuclease/phosphatase [Acinetobacter baumannii AB0057] gb|ACJ58986.1| Endonuclease/Exonuclease/phosphatase family protein [Acinetobacter baumannii AB307-0294] gb|EGJ59399.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter baumannii 6013150] gb|EGJ64572.1| endonuclease/exonuclease/phosphatase family protein [Acinetobacter baumannii 6013113] Length = 295 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 99/305 (32%), Positives = 162/305 (53%), Gaps = 28/305 (9%) Query: 2 KLTFVWWNTSLSRAAAPNRSTTLEQ---SIASDLLALMCHDIRPDAICLGEISTEDIALL 58 +L+ VWWNTSLS + R + ++ +IAS + M +D + ICLGE+ EDI Sbjct: 5 ELSVVWWNTSLSPPISSKRDKSSDEKRAAIASVIQKFMENDY--EFICLGEVGPEDIDFF 62 Query: 59 EDVC--ATHGYGVIDGIRPVGRTSFDTCVLFRT-DTLIALDNKDL---VAQKGQRYFKVA 112 E T GY GI VGRT FDTC+ ++ LI N D+ R FK Sbjct: 63 EKTIFPQTLGYFCAKGIDGVGRTFFDTCIYYKKYHYLIRNGNSDVQNFTMTSATRTFKYG 122 Query: 113 QRFDFGVCDNETIIHLFVSHWPSRIH--TSEDHPHRDLLGIRLRDAVKETRFEETQQHVI 170 Q++ F + NE I +++SHWPS+++ + + + L + + D + ET+ ++I Sbjct: 123 QKYKFSLL-NEEKITIYLSHWPSKLNDVSLQIVSIAERLRVNIEDELNETK------NII 175 Query: 171 ILGDFNDEPFDAALADHLMATRDRALAAKKSHLLYNPFWRLLGCPIPYRQTSQEMSPYSG 230 ++GD+N EP+D A+ L ++R++ + +KK ++ YNP W+ L +P Q + G Sbjct: 176 LVGDYNVEPYDPAVVHQLQSSREKTIVSKKPNVFYNPCWKFL---VPSFQLKSLNT--HG 230 Query: 231 SCYYRSGESARWRTFDQIIFSPSFLGKTSWHLCEDLVQILDFPFFTDIVRRAKHSFDHLP 290 + YY +G+ W DQI+FS +FL W L + + I++ D +++ S DH P Sbjct: 231 TYYYANGQFHHWHVIDQIMFSSNFLSD-EWDLQDKYINIVNLTNL-DNTQKSLLS-DHHP 287 Query: 291 VIAVV 295 + AV+ Sbjct: 288 LSAVI 292 >ref|ZP_07741747.1| endonuclease/exonuclease/phosphatase [Vibrio caribbenthicus ATCC BAA-2122] gb|EFP97786.1| endonuclease/exonuclease/phosphatase [Vibrio caribbenthicus ATCC BAA-2122] Length = 301 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 100/300 (33%), Positives = 146/300 (48%), Gaps = 11/300 (3%) Query: 3 LTFVWWNTSLSRAAAPNRSTTLE-QSIASDLLALMC-HDIRPDAICLGEISTEDIALLED 60 L F WWN SLS A + + QSI+ L+ ++ HD+ +C E+S+ D+ ++ Sbjct: 6 LKFGWWNVSLSPPRAKTKGSPENYQSISRILVEILIKHDLSLIGVC--EVSSNDMDQIQI 63 Query: 61 VCATHGYGVIDGIRPVGRTSFDTCVLFRTDTLIALDNKDLVAQKGQRYFKVAQRFDFGVC 120 Y V+ VGRT FDT V++ + DL + + K+ Q Sbjct: 64 HFQGTPYQVLPLDHKVGRTKFDTAVIYDPRRVCVSHEVDLKRTERGQVIKLGQALQVIDL 123 Query: 121 DNETIIHLFVSHWPSRIHTSEDHPHRDLLGIRLRDAVKETRFEETQQHVIILGDFNDEPF 180 +L + HW SRI TS R L L DAV++ +H+II+GDFN P+ Sbjct: 124 KEADKFNLILCHWASRI-TSSGESKRKLAAQGLYDAVRD--MMRNDEHIIIMGDFNASPY 180 Query: 181 DAALADHLMATR-DRALAAKKSHLLYNPFWRLLGCPIPYRQTSQEMSPY-SGSCYYRSGE 238 D+ + + L ATR A+ + L YNPFWR L Y T ++ + SGS Y+ Sbjct: 181 DSVMLEELNATRCHEAVRRHPTELFYNPFWRALPSKEVYNYTMRDTPHFPSGSHRYQDPC 240 Query: 239 SARWRTFDQIIFSPSFLGKTSWHLCEDLVQIL-DFPFFTDIVRRAKHSFDHLPVIAVVEK 297 W TFDQ++FS +FLG + WHL E + L D P + I+ K DHLPV+ + K Sbjct: 241 GQYWHTFDQMVFSGNFLGPSEWHLNESTTRTLFDEPLESSILDN-KSIIDHLPVVCEIVK 299 >ref|YP_735571.1| endonuclease/exonuclease/phosphatase [Shewanella sp. MR-4] gb|ABI40514.1| Endonuclease/exonuclease/phosphatase [Shewanella sp. MR-4] Length = 301 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 83/298 (27%), Positives = 135/298 (45%), Gaps = 6/298 (2%) Query: 3 LTFVWWNTSLSRAA--APNRSTTLEQSIASDLLALMCHDIRPDAICLGEISTEDIALLED 60 L F WWN +LS +A A +++ I + + D D + L E+S+EDI + Sbjct: 6 LRFGWWNVALSPSAPQAKSKANATTYPIICTHIETLLQDNSCDFLALCEVSSEDIRYFSE 65 Query: 61 VCATHGYGVIDGIRPVGRTSFDTCVLFRTDTLIALDNKDLVAQKGQRYFKVAQRFDFGVC 120 +++ +G+T FD V+++T + L K +Q + Sbjct: 66 NIKLEHISILNLTDKIGKTRFDLAVIYKTSKIKVNHINSLSKILTDNTVKASQLVEVENI 125 Query: 121 DNETIIHLFVSHWPSRIHTSEDHPHRDLLGIRLRDAVKETRFEETQQHVIILGDFNDEPF 180 D+ I++++ HWPSR++ + + I A + E+ + VII+GDFND P+ Sbjct: 126 DDSRKIYIYLCHWPSRLNGNSEEKRIAAANIVYNSA---STLIESGKDVIIMGDFNDNPY 182 Query: 181 DAALADHLMATR-DRALAAKKSHLLYNPFWRLLGCPIPYRQTSQEMSPYSGSCYYRSGES 239 D +L L A+R A+ S YNPFWR + Y + + SGS Y+ Sbjct: 183 DISLYKCLKASRCHDAVKKYPSEYFYNPFWRSIVSENKYSHSGITNTYRSGSYKYKQFMG 242 Query: 240 ARWRTFDQIIFSPSFLGKTSWHLCEDLVQILDFPFFTDIVRRAKHSFDHLPVIAVVEK 297 W ++DQII S SF+ T WHL E Q++ H DHLP++ + + Sbjct: 243 EIWHSYDQIIVSGSFINNTYWHLNEFRTQVITPEVILKNYEDNSHFIDHLPIVCEITR 300 >ref|YP_002152560.1| endonuclease/exonuclease/phosphatase [Proteus mirabilis HI4320] emb|CAR45632.1| putative endonuclease/exonuclease/phosphatase [Proteus mirabilis HI4320] Length = 294 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 93/307 (30%), Positives = 137/307 (44%), Gaps = 36/307 (11%) Query: 1 MKLTFVWWNTSLSRAAAPNRSTTLEQ-SIASDLLALMCHDIRPDAICLGEISTEDIALLE 59 M+L WWN +S ++ E+ +A L + D I L E+S + + Sbjct: 1 MELNLCWWNIGISPPTKSKQNVKTEKVGLAKKYLEELIIKKTLDIIALSEVSENESYAFK 60 Query: 60 DVCATHGYGVIDGIRPVGRTSFDTCVLFRTDTLIALDNKDLVA-QKGQRYFKVAQRFDFG 118 + G ID +GR D ++++ + L + +K L Q R +V F Sbjct: 61 QLATQLKMGYIDLSGKIGRIIIDISLIYQMNKLEFISSKFLTKLQPDNRMVRVGVAVVFK 120 Query: 119 VCDNETIIHLFVSHWPSRIHTSEDHPHRDLLGIRLRDAVKETRFEETQQHV--IILGDFN 176 +++ II LF+SHWPS + S + R++ LR ++ + FE V I +GD+N Sbjct: 121 EIEHQKIITLFLSHWPSIL--SANDTTREVAAAGLRSSINKL-FENNGDDVQFICMGDYN 177 Query: 177 DEPFDAALADHLMATRDRALAAKKSHLLYNPFWRLLGCPIPYRQTSQEMSPYSGSCYYRS 236 EP+ A+ + L ATRD L KK LL+NPFW LL S + + G+ YY S Sbjct: 178 TEPYSNAMLNILYATRDYHLIKKKRKLLFNPFWYLL---------SDKKTNNLGTYYYNS 228 Query: 237 GESARWRTFDQIIFSPSFL-GKTS-----------WHLCEDLVQILDFPFFTDIVRRAKH 284 RW FDQ+IFS SFL GK + + D LD FF Sbjct: 229 ASINRWYVFDQMIFSSSFLYGKEDCFKLDLEQLDFYRVLNDDNHCLDDIFFK-------- 280 Query: 285 SFDHLPV 291 FDH P+ Sbjct: 281 KFDHYPI 287