BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0301.p (231 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775080.1| hypothetical protein Hsero_1659 [Herbaspiril... 239 3e-61 ref|ZP_01815958.1| hypothetical protein VSWAT3_09153 [Vibrionale... 170 2e-40 ref|ZP_00990676.1| hypothetical protein V12B01_09316 [Vibrio spl... 168 6e-40 ref|ZP_01063944.1| hypothetical protein MED222_01632 [Vibrio sp.... 167 8e-40 ref|YP_002416282.1| hypothetical protein VS_0639 [Vibrio splendi... 167 1e-39 >ref|YP_003775080.1| hypothetical protein Hsero_1659 [Herbaspirillum seropedicae SmR1] gb|ADJ63172.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 280 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 133/189 (70%), Positives = 150/189 (79%), Gaps = 8/189 (4%) Query: 1 MMTFTARSPALARLTVLRRALGLPATVLAMALPLAAQADITPVSPAQCAQMRASKVITSG 60 MMT A RL L + ++AL AA ADITPVS AQCA+M++SKVIT+G Sbjct: 1 MMTLPALPSLFPRL--------LCGLLTSLALAQAAHADITPVSAAQCARMKSSKVITAG 52 Query: 61 NPVPCARLATVSFDYTDFGGATRQGSVVVLDALAPQVEALFGELLLRSFPLAGAQGLEAY 120 NPVPC RLATVSFDY D GA R+G+VVVLDA+AP+VEALFGELLLRSFPLAGAQ +EA+ Sbjct: 53 NPVPCQRLATVSFDYNDSEGAVRRGAVVVLDAIAPEVEALFGELLLRSFPLAGAQPMEAF 112 Query: 121 DGDDQRSMAANNSSAFNGRPMTGGGSWSKHAYGAAIDINPLQNPYVSKAGSPEQEVLPPQ 180 +GDDQRSMAANN+SAFNGRPMTGGG WSKHAYGAAIDINPLQNPYVS+AGSP QEVLPP Sbjct: 113 EGDDQRSMAANNTSAFNGRPMTGGGGWSKHAYGAAIDINPLQNPYVSQAGSPTQEVLPPA 172 Query: 181 GAPTCSARP 189 G+ P Sbjct: 173 GSAYLERSP 181 >ref|ZP_01815958.1| hypothetical protein VSWAT3_09153 [Vibrionales bacterium SWAT-3] gb|EDK26653.1| hypothetical protein VSWAT3_09153 [Vibrionales bacterium SWAT-3] Length = 269 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 86/176 (48%), Positives = 116/176 (65%), Gaps = 4/176 (2%) Query: 18 RRALGLPATVLAMALPLAAQADITPVSPAQCAQMRASKVITSGNPVPCARLATVSFDYTD 77 R +GL AT+++ A + + PVS QC M+ +KV+ SG PV C RL+ V FD+ + Sbjct: 3 RLIVGLLATLISAA----SYGQVAPVSQWQCDMMKKNKVLNSGAPVGCERLSQVDFDFVN 58 Query: 78 FGGATRQGSVVVLDALAPQVEALFGELLLRSFPLAGAQGLEAYDGDDQRSMAANNSSAFN 137 F G T+QG+++VLD +AP VE +F EL R+FPL A+ + ++GDD SM ANNSSAFN Sbjct: 59 FKGETQQGNMIVLDVIAPSVEQIFLELKQRNFPLHSARLMREFNGDDNASMEANNSSAFN 118 Query: 138 GRPMTGGGSWSKHAYGAAIDINPLQNPYVSKAGSPEQEVLPPQGAPTCSARPCSRA 193 RP+TGGG WSKHAYG AIDINP+QNP+++ + V P Q A + R RA Sbjct: 119 ARPITGGGGWSKHAYGVAIDINPVQNPFLAFDSNGTITVKPSQSATSYVNRTRFRA 174 >ref|ZP_00990676.1| hypothetical protein V12B01_09316 [Vibrio splendidus 12B01] gb|EAP94370.1| hypothetical protein V12B01_09316 [Vibrio splendidus 12B01] Length = 269 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 83/166 (50%), Positives = 109/166 (65%) Query: 28 LAMALPLAAQADITPVSPAQCAQMRASKVITSGNPVPCARLATVSFDYTDFGGATRQGSV 87 LA L A+ A + P+S QC M + V++SG PV C RL+ V FD+ +F G T+QG++ Sbjct: 9 LATVLSAASYAQVAPISQWQCDMMEKNNVLSSGAPVGCERLSKVDFDFINFKGETQQGNM 68 Query: 88 VVLDALAPQVEALFGELLLRSFPLAGAQGLEAYDGDDQRSMAANNSSAFNGRPMTGGGSW 147 +VLD +AP VE +F EL R+FPL A+ + + GDD SM ANNSSAFN RP+TGGG W Sbjct: 69 IVLDVVAPAVEQIFSELKQRNFPLHSARLMREFRGDDNASMDANNSSAFNARPITGGGGW 128 Query: 148 SKHAYGAAIDINPLQNPYVSKAGSPEQEVLPPQGAPTCSARPCSRA 193 SKHAYG AIDINP+QNP++ + + V P Q A + R RA Sbjct: 129 SKHAYGVAIDINPVQNPFLEFDSNGKITVKPSQSATSYVNRTRFRA 174 >ref|ZP_01063944.1| hypothetical protein MED222_01632 [Vibrio sp. MED222] gb|EAQ54711.1| hypothetical protein MED222_01632 [Vibrio sp. MED222] Length = 275 Score = 167 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 82/166 (49%), Positives = 108/166 (65%) Query: 28 LAMALPLAAQADITPVSPAQCAQMRASKVITSGNPVPCARLATVSFDYTDFGGATRQGSV 87 LA L A+ A + P+S QC M+ + V+++G PV C RL+ V FD+ +F G T+QG++ Sbjct: 9 LATVLSAASYAQVAPISQWQCDMMKKNNVLSNGAPVGCERLSKVDFDFINFKGETQQGNM 68 Query: 88 VVLDALAPQVEALFGELLLRSFPLAGAQGLEAYDGDDQRSMAANNSSAFNGRPMTGGGSW 147 +VLD +AP VE +F EL R+FPL A+ + + GDD SM ANNSSAFN RP+TGGG W Sbjct: 69 IVLDVIAPAVEQIFSELKQRNFPLHSARLMREFRGDDNASMDANNSSAFNARPITGGGGW 128 Query: 148 SKHAYGAAIDINPLQNPYVSKAGSPEQEVLPPQGAPTCSARPCSRA 193 SKHAYG AIDINP+QNP++ + V P Q A R RA Sbjct: 129 SKHAYGVAIDINPVQNPFLEFDKNGTITVKPSQSATRYVNRTRFRA 174 >ref|YP_002416282.1| hypothetical protein VS_0639 [Vibrio splendidus LGP32] emb|CAV17634.1| hypothetical protein VS_0639 [Vibrio splendidus LGP32] Length = 269 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 82/166 (49%), Positives = 108/166 (65%) Query: 28 LAMALPLAAQADITPVSPAQCAQMRASKVITSGNPVPCARLATVSFDYTDFGGATRQGSV 87 LA L A+ A + P+S QC M+ + V+++G PV C RL+ V FD+ +F G T+QG++ Sbjct: 9 LATVLSAASYAQVAPISQWQCDMMKKNNVLSNGAPVGCERLSKVDFDFINFKGETQQGNM 68 Query: 88 VVLDALAPQVEALFGELLLRSFPLAGAQGLEAYDGDDQRSMAANNSSAFNGRPMTGGGSW 147 +VLD +AP VE +F EL R+FPL A+ + + GDD SM ANNSSAFN RP+TGGG W Sbjct: 69 IVLDVIAPAVEQIFSELKQRNFPLHSARLMREFRGDDNSSMDANNSSAFNARPITGGGGW 128 Query: 148 SKHAYGAAIDINPLQNPYVSKAGSPEQEVLPPQGAPTCSARPCSRA 193 SKHAYG AIDINP+QNP++ + V P Q A R RA Sbjct: 129 SKHAYGVAIDINPVQNPFLEFDSNGRITVKPSQSATRYVNRTRFRA 174