BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0300.p         (95 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775080.1| hypothetical protein Hsero_1659 [Herbaspiril...   187   4e-46
ref|ZP_08099525.1| hypothetical protein VIBR0546_16838 [Vibrio b...    95   5e-18
gb|EGU44857.1| hypothetical protein VISP3789_17668 [Vibrio splen...    93   1e-17
ref|ZP_01815958.1| hypothetical protein VSWAT3_09153 [Vibrionale...    93   1e-17
ref|ZP_00990676.1| hypothetical protein V12B01_09316 [Vibrio spl...    91   7e-17

>ref|YP_003775080.1| hypothetical protein Hsero_1659 [Herbaspirillum seropedicae SmR1]
 gb|ADJ63172.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 280

 Score =  187 bits (475), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 86/95 (90%), Positives = 91/95 (95%)

Query: 1   MAEDVVSVFYEHGFLVWGGQWKQPIDYQHFEIGSRGFILKLASLPKAQARAEFGRYVTAY 60
           MAEDV+SVF++HGFLVWGG WKQPIDYQHFEIGSR FI +LASLP+ QARAEFGRYVTAY
Sbjct: 186 MAEDVISVFHDHGFLVWGGHWKQPIDYQHFEIGSRAFIQRLASLPRPQARAEFGRYVTAY 245

Query: 61  RQCAHSGASATGGDEDEDTPEDTTLRDQCAARLKK 95
           RQCAHSGASATGGDEDEDTPEDTTLRDQCAARLKK
Sbjct: 246 RQCAHSGASATGGDEDEDTPEDTTLRDQCAARLKK 280


>ref|ZP_08099525.1| hypothetical protein VIBR0546_16838 [Vibrio brasiliensis LMG 20546]
 gb|EGA64501.1| hypothetical protein VIBR0546_16838 [Vibrio brasiliensis LMG 20546]
          Length = 269

 Score = 94.7 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/63 (63%), Positives = 46/63 (73%)

Query: 1   MAEDVVSVFYEHGFLVWGGQWKQPIDYQHFEIGSRGFILKLASLPKAQARAEFGRYVTAY 60
           MAE VV +F  HGFL+WGG W  PID QHFE+GSR FI +L +LPK QA A FGRY+  Y
Sbjct: 183 MAEQVVELFAHHGFLIWGGDWNTPIDTQHFEVGSRRFINQLLALPKPQAEATFGRYIETY 242

Query: 61  RQC 63
           R C
Sbjct: 243 RSC 245


>gb|EGU44857.1| hypothetical protein VISP3789_17668 [Vibrio splendidus ATCC 33789]
          Length = 269

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/63 (60%), Positives = 46/63 (73%)

Query: 1   MAEDVVSVFYEHGFLVWGGQWKQPIDYQHFEIGSRGFILKLASLPKAQARAEFGRYVTAY 60
           MAEDVV +F  HGF++WGG W  PID QHFE+GSR F+ +L S PK +A+  F RYV  Y
Sbjct: 183 MAEDVVELFAHHGFMIWGGDWNSPIDTQHFEVGSRKFVNQLLSQPKPEAKVLFERYVETY 242

Query: 61  RQC 63
           RQC
Sbjct: 243 RQC 245


>ref|ZP_01815958.1| hypothetical protein VSWAT3_09153 [Vibrionales bacterium SWAT-3]
 gb|EDK26653.1| hypothetical protein VSWAT3_09153 [Vibrionales bacterium SWAT-3]
          Length = 269

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/63 (60%), Positives = 47/63 (74%)

Query: 1   MAEDVVSVFYEHGFLVWGGQWKQPIDYQHFEIGSRGFILKLASLPKAQARAEFGRYVTAY 60
           MAEDVV +F  HGF++WGG W  PID QHFE+GSR F+ +L S PK +A+  F RYV +Y
Sbjct: 183 MAEDVVDLFAHHGFMIWGGDWNSPIDTQHFEVGSRKFVNQLLSKPKPEAKVLFERYVESY 242

Query: 61  RQC 63
           RQC
Sbjct: 243 RQC 245


>ref|ZP_00990676.1| hypothetical protein V12B01_09316 [Vibrio splendidus 12B01]
 gb|EAP94370.1| hypothetical protein V12B01_09316 [Vibrio splendidus 12B01]
          Length = 269

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 37/63 (58%), Positives = 47/63 (74%)

Query: 1   MAEDVVSVFYEHGFLVWGGQWKQPIDYQHFEIGSRGFILKLASLPKAQARAEFGRYVTAY 60
           MAEDVV +F  HGF++WGG W  PID QHFE+GSR F+ +L S P+ +A+  F RYV +Y
Sbjct: 183 MAEDVVELFAHHGFMIWGGDWNSPIDTQHFEVGSRKFVNQLLSKPQPEAKVLFERYVESY 242

Query: 61  RQC 63
           RQC
Sbjct: 243 RQC 245