BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0291.p         (103 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775073.1| molybdopterin-binding protein [Herbaspirillu...   108   2e-22
ref|YP_296181.1| molybdenum-pterin binding protein [Ralstonia eu...   104   6e-21
ref|YP_004753673.1| organosulfonate utilization protein SsuF [Co...   103   7e-21
ref|ZP_03542265.1| TOBE domain protein [Comamonas testosteroni K...   101   5e-20
ref|ZP_04765337.1| TOBE domain protein [Acidovorax delafieldii 2...    99   2e-19

>ref|YP_003775073.1| molybdopterin-binding protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ63165.1| molybdopterin-binding protein [Herbaspirillum seropedicae SmR1]
          Length = 71

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 71/71 (100%), Positives = 71/71 (100%)

Query: 33  MTIQAINVRNQFKGKVKAIIEGSVVSEVDVETPAGIVTSVITTRSVKDLGLTIGSEVVAL 92
           MTIQAINVRNQFKGKVKAIIEGSVVSEVDVETPAGIVTSVITTRSVKDLGLTIGSEVVAL
Sbjct: 1   MTIQAINVRNQFKGKVKAIIEGSVVSEVDVETPAGIVTSVITTRSVKDLGLTIGSEVVAL 60

Query: 93  VKATEVSIAKL 103
           VKATEVSIAKL
Sbjct: 61  VKATEVSIAKL 71


>ref|YP_296181.1| molybdenum-pterin binding protein [Ralstonia eutropha JMP134]
 gb|AAZ61337.1| Molybdenum-pterin binding protein [Ralstonia eutropha JMP134]
          Length = 71

 Score =  104 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 64/71 (90%), Positives = 69/71 (97%)

Query: 33  MTIQAINVRNQFKGKVKAIIEGSVVSEVDVETPAGIVTSVITTRSVKDLGLTIGSEVVAL 92
           M+IQAINVRNQF+GKV AIIEG VVSEVDVETPAGIVTSVITTRS++DLGLT+GSEVVAL
Sbjct: 1   MSIQAINVRNQFRGKVAAIIEGPVVSEVDVETPAGIVTSVITTRSIRDLGLTLGSEVVAL 60

Query: 93  VKATEVSIAKL 103
           VKATEVSIAKL
Sbjct: 61  VKATEVSIAKL 71


>ref|YP_004753673.1| organosulfonate utilization protein SsuF [Collimonas fungivorans
           Ter331]
 gb|AEK62850.1| Organosulfonate utilization protein SsuF [Collimonas fungivorans
           Ter331]
          Length = 71

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 66/71 (92%), Positives = 70/71 (98%)

Query: 33  MTIQAINVRNQFKGKVKAIIEGSVVSEVDVETPAGIVTSVITTRSVKDLGLTIGSEVVAL 92
           MTIQAINVRNQFKGK+KAIIEG+VVSEVDVETPAGIVTSVITTRSVKDLGL IG+EVVAL
Sbjct: 1   MTIQAINVRNQFKGKIKAIIEGTVVSEVDVETPAGIVTSVITTRSVKDLGLVIGTEVVAL 60

Query: 93  VKATEVSIAKL 103
           VKATEVSIAK+
Sbjct: 61  VKATEVSIAKI 71


>ref|ZP_03542265.1| TOBE domain protein [Comamonas testosteroni KF-1]
 ref|YP_003279110.1| Molybdenum-pterin binding protein [Comamonas testosteroni CNB-2]
 ref|ZP_07045145.1| Molybdenum-pterin binding protein [Comamonas testosteroni S44]
 gb|EED66551.1| TOBE domain protein [Comamonas testosteroni KF-1]
 gb|ACY33814.1| Molybdenum-pterin binding protein [Comamonas testosteroni CNB-2]
 gb|EFI61139.1| Molybdenum-pterin binding protein [Comamonas testosteroni S44]
          Length = 71

 Score =  101 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 62/71 (87%), Positives = 65/71 (91%)

Query: 33  MTIQAINVRNQFKGKVKAIIEGSVVSEVDVETPAGIVTSVITTRSVKDLGLTIGSEVVAL 92
           M+IQAINVRNQFKGKVK II G VVSEVDVETP GIVTSVITTRSV DLGL +GSEVVAL
Sbjct: 1   MSIQAINVRNQFKGKVKEIIRGDVVSEVDVETPWGIVTSVITTRSVNDLGLAVGSEVVAL 60

Query: 93  VKATEVSIAKL 103
           VK+TEVSIAKL
Sbjct: 61  VKSTEVSIAKL 71


>ref|ZP_04765337.1| TOBE domain protein [Acidovorax delafieldii 2AN]
 gb|EER57859.1| TOBE domain protein [Acidovorax delafieldii 2AN]
          Length = 71

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 61/71 (85%), Positives = 65/71 (91%)

Query: 33  MTIQAINVRNQFKGKVKAIIEGSVVSEVDVETPAGIVTSVITTRSVKDLGLTIGSEVVAL 92
           M+IQAINVRNQFKGKV+ II G VVSEVDVETP GIVTSVITTRSV DLGL +GSEVVAL
Sbjct: 1   MSIQAINVRNQFKGKVREIIRGDVVSEVDVETPWGIVTSVITTRSVNDLGLVVGSEVVAL 60

Query: 93  VKATEVSIAKL 103
           VK+TEVSIAKL
Sbjct: 61  VKSTEVSIAKL 71