BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0289.p (279 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775071.1| alkanesulfonates ABC transporter permease [H... 395 e-108 ref|YP_004753676.1| alkanesulfonates transport system permease [... 345 5e-93 ref|YP_001352431.1| sulfonate/nitrate transport system permease ... 337 9e-91 ref|YP_004685964.1| TauT family ABC transporter permease [Cupria... 328 4e-88 ref|ZP_08504072.1| Putative aliphatic sulfonates transport perme... 327 1e-87 >ref|YP_003775071.1| alkanesulfonates ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ63163.1| ABC-type alkanesulfonates transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 279 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 247/280 (88%), Positives = 261/280 (93%), Gaps = 2/280 (0%) Query: 1 MTSATNPVLASTA-PQEQARPKAAAKAARKPRGAWVGWLLPVLLLVWWEIAAQAGWLSSR 59 MTSA+NPV A PQEQA+PKAA K+ +P AW+GWLLP+LLLVWWE+AAQAGWLSSR Sbjct: 1 MTSASNPVAGRVAGPQEQAKPKAARKSF-QPSHAWIGWLLPLLLLVWWEVAAQAGWLSSR 59 Query: 60 ILPEPWAVLRAAWNLSVSGELWTHLGVSTGRAASGFAVGGGLGLLLGLLTGTFRQAELLL 119 ILPEP AVL+AAW LS SGELW HL VS+GRAASGFAVG GLGL+LGLL+G+ R AELLL Sbjct: 60 ILPEPLAVLKAAWELSASGELWRHLAVSSGRAASGFAVGAGLGLILGLLSGSLRSAELLL 119 Query: 120 DTTLQMVRNIPALALIPLVILWFGIDETAKLFLVSVGVFFPVYLNTFHGIRSVDQGLIEM 179 DTTLQMVRNIPALALIPLVILWFGIDETAKLFLVSVGVFFPVYLNTFHGIRSVDQGLIEM Sbjct: 120 DTTLQMVRNIPALALIPLVILWFGIDETAKLFLVSVGVFFPVYLNTFHGIRSVDQGLIEM 179 Query: 180 ARSYGLSGWPLYRDVILPGALPSILVGLRFALGLVWVLLIVAETISAQAGIGYMTMNARE 239 A+SYGLSGWPLYRDVILPGALP+ILVGLRFALGLVWVLLIVAETISAQAGIGYMTMNARE Sbjct: 180 AKSYGLSGWPLYRDVILPGALPAILVGLRFALGLVWVLLIVAETISAQAGIGYMTMNARE 239 Query: 240 FLQTDVVLVGILLYALLGKLADTAARALERFWLRWHPGYQ 279 FLQTDVVLVGILLYALLGKLADTAAR LERFWLRWHPGYQ Sbjct: 240 FLQTDVVLVGILLYALLGKLADTAARWLERFWLRWHPGYQ 279 >ref|YP_004753676.1| alkanesulfonates transport system permease [Collimonas fungivorans Ter331] gb|AEK62853.1| Alkanesulfonates transport system permease protein [Collimonas fungivorans Ter331] Length = 277 Score = 345 bits (885), Expect = 5e-93, Method: Composition-based stats. Identities = 205/233 (87%), Positives = 221/233 (94%) Query: 47 WEIAAQAGWLSSRILPEPWAVLRAAWNLSVSGELWTHLGVSTGRAASGFAVGGGLGLLLG 106 WE AA+ GWLSSRILPEPWAV RAAW+L++SGELWTH+ VS RA SGFAVGGGLGLLLG Sbjct: 45 WEFAAKVGWLSSRILPEPWAVARAAWSLTLSGELWTHVRVSAWRAISGFAVGGGLGLLLG 104 Query: 107 LLTGTFRQAELLLDTTLQMVRNIPALALIPLVILWFGIDETAKLFLVSVGVFFPVYLNTF 166 LLTGTF+QAE LLDT++QM+RNIPALALIPLVILWFGIDE++KLFLVS+GVFFPVYLNTF Sbjct: 105 LLTGTFKQAETLLDTSIQMIRNIPALALIPLVILWFGIDESSKLFLVSIGVFFPVYLNTF 164 Query: 167 HGIRSVDQGLIEMARSYGLSGWPLYRDVILPGALPSILVGLRFALGLVWVLLIVAETISA 226 HGIRSVD+GLIEMA+SYGLSGWPLYRDVILPG LPSILVG+RFALGLVWVLLIVAETISA Sbjct: 165 HGIRSVDKGLIEMAKSYGLSGWPLYRDVILPGGLPSILVGVRFALGLVWVLLIVAETISA 224 Query: 227 QAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADTAARALERFWLRWHPGYQ 279 QAGIGYMTMNAREFLQTDVVLVGILLYALLGKLAD AR LER+WLRWHPGYQ Sbjct: 225 QAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADILARLLERYWLRWHPGYQ 277 >ref|YP_001352431.1| sulfonate/nitrate transport system permease protein [Janthinobacterium sp. Marseille] gb|ABR88768.1| sulfonate/nitrate transport system permease protein [Janthinobacterium sp. Marseille] Length = 276 Score = 337 bits (865), Expect = 9e-91, Method: Composition-based stats. Identities = 209/277 (75%), Positives = 236/277 (85%), Gaps = 3/277 (1%) Query: 3 SATNPVLASTAPQEQARPKAAAKAARKPRGAWVGWLLPVLLLVWWEIAAQAGWLSSRILP 62 SA P LA+ P + K V W++PVLL+ W+IA+Q GWLSSRILP Sbjct: 2 SAVLPTLATPGAAAAKAPSTWRASGLK---KLVPWIVPVLLISVWQIASQLGWLSSRILP 58 Query: 63 EPWAVLRAAWNLSVSGELWTHLGVSTGRAASGFAVGGGLGLLLGLLTGTFRQAELLLDTT 122 EP+AV +AAW L++SGELWTH+ VS RA + FAVGGGLGLLLGLLTGTF+ AE LLDTT Sbjct: 59 EPFAVAKAAWELALSGELWTHVKVSLWRATTSFAVGGGLGLLLGLLTGTFKTAETLLDTT 118 Query: 123 LQMVRNIPALALIPLVILWFGIDETAKLFLVSVGVFFPVYLNTFHGIRSVDQGLIEMARS 182 LQM+RNIPALALIPLVILWFGI+ET+K+FLV+VGVFFPVYLNTFHGIRSVD+GLIEMA+S Sbjct: 119 LQMIRNIPALALIPLVILWFGIEETSKIFLVAVGVFFPVYLNTFHGIRSVDKGLIEMAKS 178 Query: 183 YGLSGWPLYRDVILPGALPSILVGLRFALGLVWVLLIVAETISAQAGIGYMTMNAREFLQ 242 YGLSGW LYRDVILPGALPSILVG+RF+LGLVWVLLIVAETISAQ+GIGYMTMNAREFLQ Sbjct: 179 YGLSGWSLYRDVILPGALPSILVGVRFSLGLVWVLLIVAETISAQSGIGYMTMNAREFLQ 238 Query: 243 TDVVLVGILLYALLGKLADTAARALERFWLRWHPGYQ 279 TDVVLVGILLYALLGKLAD +R LE +WLRWHPGY+ Sbjct: 239 TDVVLVGILLYALLGKLADVVSRTLEGYWLRWHPGYR 275 >ref|YP_004685964.1| TauT family ABC transporter permease [Cupriavidus necator N-1] gb|AEI77483.1| ABC transport system permease protein TauT family [Cupriavidus necator N-1] Length = 267 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 207/266 (77%), Positives = 231/266 (86%), Gaps = 4/266 (1%) Query: 13 APQEQARPKAAAKAARKPRGAWVGWLLPVLLLVWWEIAAQAGWLSSRILPEPWAVLRAAW 72 AP Q +A AR A W++PVLL+V W++A+Q GWLSSR+LP P AV++AAW Sbjct: 3 APLSQPPRQAPQALAR----ALAPWIVPVLLIVAWQLASQNGWLSSRVLPAPLAVVQAAW 58 Query: 73 NLSVSGELWTHLGVSTGRAASGFAVGGGLGLLLGLLTGTFRQAELLLDTTLQMVRNIPAL 132 L+ SGELW H+GVST RA GFA+GGGLGLLLGLLTGTFR A LLD+TLQMVRNIPAL Sbjct: 59 ELARSGELWKHVGVSTWRALVGFAIGGGLGLLLGLLTGTFRTAATLLDSTLQMVRNIPAL 118 Query: 133 ALIPLVILWFGIDETAKLFLVSVGVFFPVYLNTFHGIRSVDQGLIEMARSYGLSGWPLYR 192 ALIPLVILWFGIDETAKLFLVS+GVFFPVYLNT+HGIRSVD GL+EMARSYGLSGW LYR Sbjct: 119 ALIPLVILWFGIDETAKLFLVSLGVFFPVYLNTYHGIRSVDTGLVEMARSYGLSGWQLYR 178 Query: 193 DVILPGALPSILVGLRFALGLVWVLLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILL 252 +VILPGALP ILVG+RFALGL+WV+LIVAETISAQ+GIGYMTMNAREFLQTDVVLVGILL Sbjct: 179 EVILPGALPGILVGVRFALGLMWVVLIVAETISAQSGIGYMTMNAREFLQTDVVLVGILL 238 Query: 253 YALLGKLADTAARALERFWLRWHPGY 278 YALLGKLAD +R LER+WLRWHPGY Sbjct: 239 YALLGKLADWLSRGLERYWLRWHPGY 264 >ref|ZP_08504072.1| Putative aliphatic sulfonates transport permease protein ssuC [Methyloversatilis universalis FAM5] gb|EGK72620.1| Putative aliphatic sulfonates transport permease protein ssuC [Methyloversatilis universalis FAM5] Length = 263 Score = 327 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 190/243 (78%), Positives = 213/243 (87%) Query: 37 WLLPVLLLVWWEIAAQAGWLSSRILPEPWAVLRAAWNLSVSGELWTHLGVSTGRAASGFA 96 W LP+ LLV W++AAQ GWLSSR+LP P VL+A W L+VSGELW H+ VS RA SGFA Sbjct: 19 WSLPITLLVLWQVAAQTGWLSSRVLPAPLDVLKAFWTLAVSGELWRHVLVSAQRALSGFA 78 Query: 97 VGGGLGLLLGLLTGTFRQAELLLDTTLQMVRNIPALALIPLVILWFGIDETAKLFLVSVG 156 +GGGLGLLLGL TG++++ E LLDTT+QM+RNIP LALIPLVILWFGIDETAKLFLVS+G Sbjct: 79 IGGGLGLLLGLATGSWKRVETLLDTTVQMIRNIPPLALIPLVILWFGIDETAKLFLVSLG 138 Query: 157 VFFPVYLNTFHGIRSVDQGLIEMARSYGLSGWPLYRDVILPGALPSILVGLRFALGLVWV 216 VFFPVY+NTFHGIRSVD GLIEM R+YGL GW LYRD+ILPGALPSILVG+RF+LG +WV Sbjct: 139 VFFPVYINTFHGIRSVDAGLIEMGRAYGLRGWALYRDIILPGALPSILVGVRFSLGFMWV 198 Query: 217 LLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADTAARALERFWLRWHP 276 +LIVAETISAQ GIGYMTMNAREFL TDVVLVGILLYALLGKLAD AR LER WL+WHP Sbjct: 199 ILIVAETISAQEGIGYMTMNAREFLMTDVVLVGILLYALLGKLADLLARTLERVWLQWHP 258 Query: 277 GYQ 279 YQ Sbjct: 259 NYQ 261