BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0287.p (409 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775069.1| alkanesulfonates ABC transporter periplasmic... 564 e-158 ref|YP_004753679.1| alkanesulfonates-binding protein [Collimonas... 432 e-119 ref|ZP_03268216.1| aliphatic sulfonates family ABC transporter, ... 411 e-112 ref|YP_555276.1| ABC aliphatic sulfonates transporter, periplasm... 409 e-112 ref|ZP_06841457.1| aliphatic sulfonates family ABC transporter, ... 408 e-112 >ref|YP_003775069.1| alkanesulfonates ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ63161.1| ABC-type alkanesulfonates transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 327 Score = 564 bits (1453), Expect = e-158, Method: Composition-based stats. Identities = 305/327 (93%), Positives = 319/327 (97%) Query: 83 VSANKNKTIHFPRRRSLQRLSAIALGALAFSLGTAPVQAQETKLLRIGYQKAANTLVLLK 142 +SANKNKT+H RRR++QRLSAIALGAL +LG +PVQAQETKLLRIGYQKAANTLVLLK Sbjct: 1 MSANKNKTVHQARRRAIQRLSAIALGALTIALGASPVQAQETKLLRIGYQKAANTLVLLK 60 Query: 143 AHGALEKRLQPLGVEVKWAEFAAGPQLLEALNVGSVDFGYVGEAPPVFAQAAGADFVYTA 202 AHG LEKRLQPLGVEVKWAEFAAGPQLLEALNVGSVDFGYVGEAPPVFAQAAGADFVYTA Sbjct: 61 AHGTLEKRLQPLGVEVKWAEFAAGPQLLEALNVGSVDFGYVGEAPPVFAQAAGADFVYTA 120 Query: 203 YEIPTPEAEGLLVPKDSPIKSVAELKGKKIAFNKGSDVHWLVVALLKKAGLQYSDIQPVY 262 YEIPTP+AEGLLV K+SPIKSVAELKGKKIAFNKGSDVHWLVVALLKKAGLQYSDIQPVY Sbjct: 121 YEIPTPDAEGLLVQKNSPIKSVAELKGKKIAFNKGSDVHWLVVALLKKAGLQYSDIQPVY 180 Query: 263 LAPADARAAFERGAVDAWAIWDPFQAAAEKQVGARRLASGVGAVSHHQFFLSARPFAAKN 322 LAPADARAAFERGAVDAWAIWDPFQAAAEKQVGARRLA+GVGAV+HHQFFLSARPFAAKN Sbjct: 181 LAPADARAAFERGAVDAWAIWDPFQAAAEKQVGARRLATGVGAVNHHQFFLSARPFAAKN 240 Query: 323 PQVEKILLEEITREGEWVRTHTAEAAAQLAPIQGLDADIIQTGLKRYAHVYKPVDAQVLA 382 PQVEKILLEEI+REGEWVRTHTA+AAAQLAPIQGLDADII+TGLKRYAHVYKPVDAQVLA Sbjct: 241 PQVEKILLEEISREGEWVRTHTAQAAAQLAPIQGLDADIIETGLKRYAHVYKPVDAQVLA 300 Query: 383 EQQKIADAFFELKLIPKQLKVSDAVLK 409 EQQKIADAF+ELKLIPK LKVSDAVLK Sbjct: 301 EQQKIADAFYELKLIPKPLKVSDAVLK 327 >ref|YP_004753679.1| alkanesulfonates-binding protein [Collimonas fungivorans Ter331] gb|AEK62856.1| Alkanesulfonates-binding protein [Collimonas fungivorans Ter331] Length = 331 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 229/314 (72%), Positives = 265/314 (84%), Gaps = 1/314 (0%) Query: 95 RRRSLQRLSAIALGALAFSLGTAPVQAQETKLLRIGYQKAANTLVLLKAHGALEKRLQPL 154 RR+ L LSA+ GA AF+ QAQ+ ++LRIGYQKAA+TLVLLKAHG LEKRL Sbjct: 11 RRQVLALLSAVVAGA-AFTGLPQLAQAQDKQVLRIGYQKAASTLVLLKAHGTLEKRLAAQ 69 Query: 155 GVEVKWAEFAAGPQLLEALNVGSVDFGYVGEAPPVFAQAAGADFVYTAYEIPTPEAEGLL 214 G+EVKWAEFAAGPQLLEALNVGSVDFGYVGEAPP+ AQAAGADFVY+AYEIPTPEAE +L Sbjct: 70 GIEVKWAEFAAGPQLLEALNVGSVDFGYVGEAPPIVAQAAGADFVYSAYEIPTPEAESIL 129 Query: 215 VPKDSPIKSVAELKGKKIAFNKGSDVHWLVVALLKKAGLQYSDIQPVYLAPADARAAFER 274 VPK+SPI S+A+LKGKKIAFNKGSDVHWLV++LLKK G+ Y++ QP+YLAPADARAAFER Sbjct: 130 VPKNSPITSLAQLKGKKIAFNKGSDVHWLVISLLKKGGIAYTEFQPIYLAPADARAAFER 189 Query: 275 GAVDAWAIWDPFQAAAEKQVGARRLASGVGAVSHHQFFLSARPFAAKNPQVEKILLEEIT 334 GAVD WAIWDPFQ AA KQ+ AR LASG G VSHHQFFLSAR +A KN V +LEE Sbjct: 190 GAVDGWAIWDPFQTAAIKQIDARVLASGSGVVSHHQFFLSARKYAEKNQAVVNAVLEEAG 249 Query: 335 REGEWVRTHTAEAAAQLAPIQGLDADIIQTGLKRYAHVYKPVDAQVLAEQQKIADAFFEL 394 +EG+W+R + EAAAQLAPIQGL+ D+I+TGLK YAH+YKPVD++VL EQQKIAD F+EL Sbjct: 250 KEGQWIRANYKEAAAQLAPIQGLEPDVIETGLKHYAHIYKPVDSKVLDEQQKIADTFYEL 309 Query: 395 KLIPKQLKVSDAVL 408 KLIPK++ DAVL Sbjct: 310 KLIPKKISTRDAVL 323 >ref|ZP_03268216.1| aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [Burkholderia sp. H160] gb|EEA00217.1| aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [Burkholderia sp. H160] Length = 397 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 216/315 (68%), Positives = 252/315 (80%), Gaps = 1/315 (0%) Query: 95 RRRSLQRLSA-IALGALAFSLGTAPVQAQETKLLRIGYQKAANTLVLLKAHGALEKRLQP 153 RR L + A +A AL TA + K LRIGYQKAA+TLVLLKAHG LEKRL P Sbjct: 79 RRTFLANIGATLAAAALPGFSATAFAADEHAKELRIGYQKAASTLVLLKAHGTLEKRLAP 138 Query: 154 LGVEVKWAEFAAGPQLLEALNVGSVDFGYVGEAPPVFAQAAGADFVYTAYEIPTPEAEGL 213 LG+ VKW EF AGPQLLE LNVG++DFGYVGEAPPVFAQAAGA+FVYTAYEIPTP AEG+ Sbjct: 139 LGIAVKWTEFPAGPQLLEGLNVGAIDFGYVGEAPPVFAQAAGANFVYTAYEIPTPHAEGI 198 Query: 214 LVPKDSPIKSVAELKGKKIAFNKGSDVHWLVVALLKKAGLQYSDIQPVYLAPADARAAFE 273 LV D+PI+++A+LKGKKIA NKGSDVHW +VA L+K G+++S++QPVYL PADARAAFE Sbjct: 199 LVHPDAPIRTLADLKGKKIALNKGSDVHWFLVAALQKNGVKFSEVQPVYLPPADARAAFE 258 Query: 274 RGAVDAWAIWDPFQAAAEKQVGARRLASGVGAVSHHQFFLSARPFAAKNPQVEKILLEEI 333 RGAVDAWAIWDPF AA++Q AR LA G VSHHQFFLSARPFA +N +V I+++E Sbjct: 259 RGAVDAWAIWDPFLEAAKRQTNARLLADADGIVSHHQFFLSARPFAQQNGEVLAIVIDEA 318 Query: 334 TREGEWVRTHTAEAAAQLAPIQGLDADIIQTGLKRYAHVYKPVDAQVLAEQQKIADAFFE 393 +EGEWVR H +EAAAQLAPIQGLDA +I++GL YAHVYKPVDA VLAEQQ+IAD F E Sbjct: 319 GKEGEWVRGHYSEAAAQLAPIQGLDASVIESGLHHYAHVYKPVDANVLAEQQRIADTFAE 378 Query: 394 LKLIPKQLKVSDAVL 408 L LIP ++ DA L Sbjct: 379 LHLIPTKIVTRDAAL 393 >ref|YP_555276.1| ABC aliphatic sulfonates transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gb|ABE35926.1| ABC aliphatic sulfonates transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] Length = 328 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 212/307 (69%), Positives = 251/307 (81%), Gaps = 3/307 (0%) Query: 102 LSAIALGALAFSLGTAPVQAQETKLLRIGYQKAANTLVLLKAHGALEKRLQPLGVEVKWA 161 L+A L ++ S+ +A A+E RIGYQKAANTLVLLK+HG LEKRL PLG+ VKW Sbjct: 20 LAAATLPVVSTSVFSADAHARE---FRIGYQKAANTLVLLKSHGTLEKRLAPLGITVKWT 76 Query: 162 EFAAGPQLLEALNVGSVDFGYVGEAPPVFAQAAGADFVYTAYEIPTPEAEGLLVPKDSPI 221 EF AGPQLLE LNVG++DFGYVGEAPPVFAQAAGA+FVY AYEIPTP AEG+LV +DSPI Sbjct: 77 EFPAGPQLLEGLNVGAIDFGYVGEAPPVFAQAAGANFVYVAYEIPTPHAEGILVHRDSPI 136 Query: 222 KSVAELKGKKIAFNKGSDVHWLVVALLKKAGLQYSDIQPVYLAPADARAAFERGAVDAWA 281 K++A+LKGKKIAFNKGSDVHW +VA L+K+G++YS+IQPVYLAPADARAAFERGA+DAWA Sbjct: 137 KTLADLKGKKIAFNKGSDVHWFLVAALQKSGVKYSEIQPVYLAPADARAAFERGAIDAWA 196 Query: 282 IWDPFQAAAEKQVGARRLASGVGAVSHHQFFLSARPFAAKNPQVEKILLEEITREGEWVR 341 IWDPF AA++Q AR LA G G VSHHQFFLSAR FA +N V I ++E+ +EG WVR Sbjct: 197 IWDPFLEAAKRQSNARLLADGEGIVSHHQFFLSARSFAQQNADVLAITMDEVGKEGAWVR 256 Query: 342 THTAEAAAQLAPIQGLDADIIQTGLKRYAHVYKPVDAQVLAEQQKIADAFFELKLIPKQL 401 H +EAAAQLAPIQGLDA +I+ GL+ YAH+YKPVDA VLAEQQ IAD F +L +IP ++ Sbjct: 257 GHYSEAAAQLAPIQGLDAGVIEAGLRHYAHIYKPVDASVLAEQQHIADTFADLHVIPTRI 316 Query: 402 KVSDAVL 408 DA L Sbjct: 317 VTKDAAL 323 >ref|ZP_06841457.1| aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein [Burkholderia sp. Ch1-1] gb|EFG70983.1| aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein [Burkholderia sp. Ch1-1] Length = 328 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 212/307 (69%), Positives = 250/307 (81%), Gaps = 3/307 (0%) Query: 102 LSAIALGALAFSLGTAPVQAQETKLLRIGYQKAANTLVLLKAHGALEKRLQPLGVEVKWA 161 L+A L ++ S+ A A+E RIGYQKAANTLVLLK+HG LEKRL PLG+ VKW Sbjct: 20 LAAATLPVVSTSVFAADAHARE---FRIGYQKAANTLVLLKSHGTLEKRLAPLGITVKWT 76 Query: 162 EFAAGPQLLEALNVGSVDFGYVGEAPPVFAQAAGADFVYTAYEIPTPEAEGLLVPKDSPI 221 EF AGPQLLE LNVG++DFGYVGEAPPVFAQAAGA+FVY AYEIPTP AEG+LV +D+PI Sbjct: 77 EFPAGPQLLEGLNVGAIDFGYVGEAPPVFAQAAGANFVYVAYEIPTPHAEGILVHQDAPI 136 Query: 222 KSVAELKGKKIAFNKGSDVHWLVVALLKKAGLQYSDIQPVYLAPADARAAFERGAVDAWA 281 K++A+LKGKKIAFNKGSDVHW +VA L+K+G++YS+IQPVYLAPADARAAFERGA+DAWA Sbjct: 137 KTLADLKGKKIAFNKGSDVHWFLVAALQKSGVKYSEIQPVYLAPADARAAFERGAIDAWA 196 Query: 282 IWDPFQAAAEKQVGARRLASGVGAVSHHQFFLSARPFAAKNPQVEKILLEEITREGEWVR 341 IWDPF AA++Q AR LA G G VSHHQFFLSAR FA +N V I ++E+ +EG WVR Sbjct: 197 IWDPFLEAAKRQSNARLLADGEGIVSHHQFFLSARSFAQQNADVLAITMDEVGKEGAWVR 256 Query: 342 THTAEAAAQLAPIQGLDADIIQTGLKRYAHVYKPVDAQVLAEQQKIADAFFELKLIPKQL 401 H +EAAAQLAPIQGLDA +I+ GL+ YAH+YKPVDA VLAEQQ IAD F EL +IP ++ Sbjct: 257 GHYSEAAAQLAPIQGLDAGVIEAGLRHYAHIYKPVDASVLAEQQHIADTFAELHIIPTRI 316 Query: 402 KVSDAVL 408 DA L Sbjct: 317 VTKDAAL 323