BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0283.p (261 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775066.1| transcription regulator protein [Herbaspiril... 466 e-129 ref|YP_004753686.1| putative transcriptional regulator [Collimon... 424 e-117 gb|ABW82973.1| IclR family transcriptional regulator [uncultured... 411 e-113 ref|ZP_08275374.1| putative transcriptional regulator (IclR fami... 403 e-110 ref|YP_001352423.1| IclR family transcriptional regulator [Janth... 399 e-109 >ref|YP_003775066.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ63158.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 261 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 255/261 (97%), Positives = 257/261 (98%), Gaps = 2/261 (0%) Query: 1 MKKEAAGETEQ-ISIQVIERMVSLLDALAEYPDPVSLKELSAATDLHPSTAHRILNDLVV 59 MKKEA GETEQ ISIQVIERMVSLLDALA YPDPVSLKELSAATDLHPSTAHRILNDLVV Sbjct: 1 MKKEA-GETEQHISIQVIERMVSLLDALAAYPDPVSLKELSAATDLHPSTAHRILNDLVV 59 Query: 60 KRFVDRVEPGTYRLGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEI 119 KRFVDRVEPGTYRLGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEI Sbjct: 60 KRFVDRVEPGTYRLGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEI 119 Query: 120 VYIDRSFSERSGMQVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSI 179 VYIDRSFSERSGMQVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSI Sbjct: 120 VYIDRSFSERSGMQVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSI 179 Query: 180 TDLTKLERELSMVRALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEW 239 TDL KLERELSMVRALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEW Sbjct: 180 TDLAKLERELSMVRALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEW 239 Query: 240 VDDLVSTASQISSALGYRKDR 260 V+DLVSTASQISSALGYR+DR Sbjct: 240 VEDLVSTASQISSALGYRQDR 260 >ref|YP_004753686.1| putative transcriptional regulator [Collimonas fungivorans Ter331] gb|AEK62863.1| putative transcriptional regulator (IclR family) [Collimonas fungivorans Ter331] Length = 260 Score = 424 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 221/256 (86%), Positives = 242/256 (94%) Query: 1 MKKEAAGETEQISIQVIERMVSLLDALAEYPDPVSLKELSAATDLHPSTAHRILNDLVVK 60 MK +T++ISIQVIERM+SLLD LA YPDPVSLKELSA T LHPSTAHRILNDLVVK Sbjct: 1 MKTATTDDTDKISIQVIERMISLLDTLALYPDPVSLKELSAVTGLHPSTAHRILNDLVVK 60 Query: 61 RFVDRVEPGTYRLGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEIV 120 RFVDR EPG+YRLGMRLLELGN+VKSRL+VREAALDFMR LHRKT+QT+NLSVRQ+DEIV Sbjct: 61 RFVDRSEPGSYRLGMRLLELGNVVKSRLNVREAALDFMRGLHRKTNQTVNLSVRQSDEIV 120 Query: 121 YIDRSFSERSGMQVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSIT 180 YIDR+FSERSGMQVVRAIGGRAPLHLTSTGKLFLS+DDPK VRAYATRTGLAGHNKNSIT Sbjct: 121 YIDRAFSERSGMQVVRAIGGRAPLHLTSTGKLFLSIDDPKMVRAYATRTGLAGHNKNSIT 180 Query: 181 DLTKLERELSMVRALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEWV 240 DL+KLERELS+VRALGYARDNEELELGVRCMAAGI DDSGK+VAGLSISAPADRLQ+EWV Sbjct: 181 DLSKLERELSLVRALGYARDNEELELGVRCMAAGIRDDSGKMVAGLSISAPADRLQEEWV 240 Query: 241 DDLVSTASQISSALGY 256 +DL++TA+QIS+ LGY Sbjct: 241 EDLINTANQISAVLGY 256 >gb|ABW82973.1| IclR family transcriptional regulator [uncultured bacterium pEAF66] Length = 259 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 214/249 (85%), Positives = 230/249 (92%) Query: 8 ETEQISIQVIERMVSLLDALAEYPDPVSLKELSAATDLHPSTAHRILNDLVVKRFVDRVE 67 + + SIQVIERMV+LLDALA Y DPVSLKELS + LHPSTAHRILND+V+ RFVDRVE Sbjct: 7 DAPKTSIQVIERMVALLDALANYTDPVSLKELSKVSGLHPSTAHRILNDMVITRFVDRVE 66 Query: 68 PGTYRLGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEIVYIDRSFS 127 PGTYRLGMRLLELGN+VKSRLSVREAALDFMRALH+KT QTINLSVRQ DEIVYIDR+FS Sbjct: 67 PGTYRLGMRLLELGNVVKSRLSVREAALDFMRALHKKTQQTINLSVRQGDEIVYIDRAFS 126 Query: 128 ERSGMQVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSITDLTKLER 187 ERSGMQVVRAIGGR PLHLTSTGKLFLSVD+PK +RAYATRTGLAGHNKNSITDL KLER Sbjct: 127 ERSGMQVVRAIGGRGPLHLTSTGKLFLSVDEPKAIRAYATRTGLAGHNKNSITDLGKLER 186 Query: 188 ELSMVRALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEWVDDLVSTA 247 ELSMVR GYARDNEELELGVRCMAAGI DDSGKLVAGLSISAPADRLQ+EW++DLV TA Sbjct: 187 ELSMVRTRGYARDNEELELGVRCMAAGIHDDSGKLVAGLSISAPADRLQEEWLEDLVGTA 246 Query: 248 SQISSALGY 256 +QIS+ LGY Sbjct: 247 AQISATLGY 255 >ref|ZP_08275374.1| putative transcriptional regulator (IclR family) [Oxalobacteraceae bacterium IMCC9480] gb|EGF31151.1| putative transcriptional regulator (IclR family) [Oxalobacteraceae bacterium IMCC9480] Length = 261 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 211/256 (82%), Positives = 236/256 (92%) Query: 1 MKKEAAGETEQISIQVIERMVSLLDALAEYPDPVSLKELSAATDLHPSTAHRILNDLVVK 60 M A ET++ SIQVIER+ SLLDALA YPDPVSLK+LSA T LHPSTAHRILNDLV+K Sbjct: 1 MTTTAHPETDKTSIQVIERLTSLLDALARYPDPVSLKQLSADTGLHPSTAHRILNDLVLK 60 Query: 61 RFVDRVEPGTYRLGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEIV 120 RFV+R EPG YRLGMRLLELGN+VKSRL+VREAA+DFMRALHRKT QT+NLSVRQ DEIV Sbjct: 61 RFVERAEPGAYRLGMRLLELGNVVKSRLNVREAAVDFMRALHRKTFQTVNLSVRQGDEIV 120 Query: 121 YIDRSFSERSGMQVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSIT 180 YIDR+FSERSGMQVVRAIGGRAPLHLTSTGKLFLSVDDPK+VR+YATRTGL+GHNKNSIT Sbjct: 121 YIDRAFSERSGMQVVRAIGGRAPLHLTSTGKLFLSVDDPKSVRSYATRTGLSGHNKNSIT 180 Query: 181 DLTKLERELSMVRALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEWV 240 +LT LERELS+VRA G+ARDNEELELGVRCMAAGI DDSG+L+AGLSISAPADRLQ+EW+ Sbjct: 181 ELTTLERELSLVRARGFARDNEELELGVRCMAAGIRDDSGRLIAGLSISAPADRLQEEWL 240 Query: 241 DDLVSTASQISSALGY 256 +DL+ T +QIS+ LGY Sbjct: 241 EDLMLTVNQISAVLGY 256 >ref|YP_001352423.1| IclR family transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR89838.1| transcriptional regulator, IclR family [Janthinobacterium sp. Marseille] Length = 258 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 208/255 (81%), Positives = 233/255 (91%) Query: 4 EAAGETEQISIQVIERMVSLLDALAEYPDPVSLKELSAATDLHPSTAHRILNDLVVKRFV 63 + A +T++ SIQVIERMV+LLDALA YPDPVSLKELS+ T LHPSTAHRILNDLV+KRFV Sbjct: 2 KTAADTDKTSIQVIERMVALLDALALYPDPVSLKELSSVTGLHPSTAHRILNDLVIKRFV 61 Query: 64 DRVEPGTYRLGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEIVYID 123 DR EPGTYRLGMRLLELGNIVKSRL VREAALD MR LHRKT+QT+NLSVRQ DEI+YID Sbjct: 62 DRSEPGTYRLGMRLLELGNIVKSRLDVREAALDLMRHLHRKTNQTVNLSVRQNDEIIYID 121 Query: 124 RSFSERSGMQVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSITDLT 183 R+FSERSGMQVVRA+GGRAPLHLTSTGKLFLS+D+P+ V+AYATRTGLAGHNKNSITDL Sbjct: 122 RAFSERSGMQVVRAVGGRAPLHLTSTGKLFLSIDEPRMVQAYATRTGLAGHNKNSITDLK 181 Query: 184 KLERELSMVRALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEWVDDL 243 KLE EL+ VR GYARDNEELELGVRCMAAGI DD+G+L+AGLSISAPADRLQ+EW+ DL Sbjct: 182 KLEGELNQVRLHGYARDNEELELGVRCMAAGIHDDTGRLIAGLSISAPADRLQEEWLADL 241 Query: 244 VSTASQISSALGYRK 258 + TA QIS+ALGY + Sbjct: 242 MDTAKQISAALGYSE 256