BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0275.p (360 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775062.1| drug/metabolite transporter (DMT) superfamil... 452 e-125 ref|ZP_08275378.1| putative membrane protein [Oxalobacteraceae b... 371 e-100 ref|YP_001352420.1| transporter of the DMT superfamily [Janthino... 359 5e-97 ref|YP_004753690.1| hypothetical protein CFU_3042 [Collimonas fu... 356 3e-96 ref|YP_001099133.1| hypothetical protein HEAR0815 [Herminiimonas... 352 4e-95 >ref|YP_003775062.1| drug/metabolite transporter (DMT) superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ63154.1| permease of the drug/metabolite transporter (DMT) superfamily protein [Herbaspirillum seropedicae SmR1] Length = 299 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 290/299 (96%), Positives = 294/299 (98%) Query: 1 MMQSAAGARRPRQLLMSLVPLLFVLIWSTGFIVAKFGLPYAPPLTFLLLRFTGVLVVLLP 60 MM S AGA RPRQLLMSLVPLLFVLIWSTGFIVAKFGLPYAPPLTFLLLRFTGVL+VLLP Sbjct: 1 MMPSPAGASRPRQLLMSLVPLLFVLIWSTGFIVAKFGLPYAPPLTFLLLRFTGVLLVLLP 60 Query: 61 LVLLFRAPWPHGRIRHVAVAGVLLQAGYLAGVWCAIKIGMPAGLSALIVGLQPILTAFAA 120 LVLLFRAPWPHGRIRHVAVAGVLLQAGYLAGVWCAIKIGMPAGLSALIVGLQPILTAFAA Sbjct: 61 LVLLFRAPWPHGRIRHVAVAGVLLQAGYLAGVWCAIKIGMPAGLSALIVGLQPILTAFAA 120 Query: 121 PLLGESVKGRQWIGLALGLCGVGLVVANKISLIGLSTASIALCVFALLCITAGTLYQKRY 180 PLLGESV+GRQW+GLALGLCGVGLVVANKISLIGLSTASIALCVFALLCITAGTLYQKRY Sbjct: 121 PLLGESVRGRQWLGLALGLCGVGLVVANKISLIGLSTASIALCVFALLCITAGTLYQKRY 180 Query: 181 CAHFDLRTGTAIQFMASIVVVLPFAVAVEGLDWQLSNVHWTPQFIGALLWSVLALSIGAI 240 CAHFDLRTGTAIQFMASIVVVLP AVAVEGLDW+LSNV WTPQFIGALLWSVLALSIGAI Sbjct: 181 CAHFDLRTGTAIQFMASIVVVLPLAVAVEGLDWRLSNVAWTPQFIGALLWSVLALSIGAI 240 Query: 241 FLLFALIRRSAATSVTSLLYLTPPTTAVMAWLMFGEAFSLIGALGMLVGVIGVAFVVRK 299 FLLFALIRRSAATSVTSLLYLTPPTTAVMAWLMFGEAFSLIGALGMLVGVIGVAFVVRK Sbjct: 241 FLLFALIRRSAATSVTSLLYLTPPTTAVMAWLMFGEAFSLIGALGMLVGVIGVAFVVRK 299 >ref|ZP_08275378.1| putative membrane protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF31155.1| putative membrane protein [Oxalobacteraceae bacterium IMCC9480] Length = 298 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 234/299 (78%), Positives = 258/299 (86%), Gaps = 1/299 (0%) Query: 1 MMQSAAGARRPRQLLMSLVPLLFVLIWSTGFIVAKFGLPYAPPLTFLLLRFTGVLVVLLP 60 M SA A RP L ++ P LFVL+WSTGFIVAKFGLPYAPPLTFLLLRF GVL+VLLP Sbjct: 1 MATSALAATRPSPYLAAM-PWLFVLLWSTGFIVAKFGLPYAPPLTFLLLRFAGVLLVLLP 59 Query: 61 LVLLFRAPWPHGRIRHVAVAGVLLQAGYLAGVWCAIKIGMPAGLSALIVGLQPILTAFAA 120 LVL+ RAPWP GR+ HVA+AGVL+QAGYLAGVWCAIK+GMPAGLSALIVG+QP+LTAFAA Sbjct: 60 LVLILRAPWPTGRVGHVALAGVLVQAGYLAGVWCAIKLGMPAGLSALIVGMQPVLTAFAA 119 Query: 121 PLLGESVKGRQWIGLALGLCGVGLVVANKISLIGLSTASIALCVFALLCITAGTLYQKRY 180 PL+GESV+G+QWIGLALGLCGV LVVANKISLIGLST +I LC+ ALL ITAGTLYQKRY Sbjct: 120 PLIGESVRGKQWIGLALGLCGVALVVANKISLIGLSTDAILLCLMALLSITAGTLYQKRY 179 Query: 181 CAHFDLRTGTAIQFMASIVVVLPFAVAVEGLDWQLSNVHWTPQFIGALLWSVLALSIGAI 240 CAHFDLRTGT IQF AS VVLPFA+ EG L V WTP FIGALLWS+LALSIGAI Sbjct: 180 CAHFDLRTGTIIQFAASAAVVLPFAILFEGFSPALEAVQWTPSFIGALLWSILALSIGAI 239 Query: 241 FLLFALIRRSAATSVTSLLYLTPPTTAVMAWLMFGEAFSLIGALGMLVGVIGVAFVVRK 299 FLLF+LIR+SAATSVTSLLYLTPPTTA+MAWL FGE FS +G +GMLV V GV FVV+K Sbjct: 240 FLLFSLIRKSAATSVTSLLYLTPPTTALMAWLAFGEQFSWVGLVGMLVAVTGVIFVVKK 298 >ref|YP_001352420.1| transporter of the DMT superfamily [Janthinobacterium sp. Marseille] gb|ABR91085.1| transporter of the DMT superfamily [Janthinobacterium sp. Marseille] Length = 294 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 217/284 (76%), Positives = 243/284 (85%) Query: 16 MSLVPLLFVLIWSTGFIVAKFGLPYAPPLTFLLLRFTGVLVVLLPLVLLFRAPWPHGRIR 75 ++ +P FVLIWSTGFIVAKFGLPYAPPLTFL LRF GVL++LLPLVLL RAPWP G +R Sbjct: 11 LAAMPFFFVLIWSTGFIVAKFGLPYAPPLTFLALRFIGVLIILLPLVLLLRAPWPVGTMR 70 Query: 76 HVAVAGVLLQAGYLAGVWCAIKIGMPAGLSALIVGLQPILTAFAAPLLGESVKGRQWIGL 135 H+AVAG+L+QAGYLAGVWCAIK+GMPAGLSALIVG+QP+LTAFAAPL+GE V+ RQWIGL Sbjct: 71 HIAVAGILVQAGYLAGVWCAIKLGMPAGLSALIVGMQPVLTAFAAPLIGERVRPRQWIGL 130 Query: 136 ALGLCGVGLVVANKISLIGLSTASIALCVFALLCITAGTLYQKRYCAHFDLRTGTAIQFM 195 GLCGV LVVANKI++IGL+ SIALCV ALL IT GT+YQK YC HFDLRTGT IQF Sbjct: 131 IFGLCGVALVVANKITVIGLTWESIALCVMALLSITIGTMYQKLYCPHFDLRTGTIIQFA 190 Query: 196 ASIVVVLPFAVAVEGLDWQLSNVHWTPQFIGALLWSVLALSIGAIFLLFALIRRSAATSV 255 AS VV+PFA+ E L +V WTP FIGALLWSV+ALSIGAIFLLFALIR+SAAT V Sbjct: 191 ASCAVVVPFAIYFEDFSPALQSVQWTPSFIGALLWSVVALSIGAIFLLFALIRKSAATQV 250 Query: 256 TSLLYLTPPTTAVMAWLMFGEAFSLIGALGMLVGVIGVAFVVRK 299 TSLLYLTPPTTA+MAW FGE FSLIG GML+ VIGVAFVV+K Sbjct: 251 TSLLYLTPPTTALMAWAAFGEVFSLIGIAGMLLAVIGVAFVVKK 294 >ref|YP_004753690.1| hypothetical protein CFU_3042 [Collimonas fungivorans Ter331] gb|AEK62867.1| conserved hypothetical protein, putative membrane protein [Collimonas fungivorans Ter331] Length = 299 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 216/285 (75%), Positives = 251/285 (88%) Query: 15 LMSLVPLLFVLIWSTGFIVAKFGLPYAPPLTFLLLRFTGVLVVLLPLVLLFRAPWPHGRI 74 L++ +P++FVL+WSTGF+VAKFGLPYAPPLTFLLLRF GVL+VLLPLVLL RAPWP G++ Sbjct: 15 LLAAMPMVFVLLWSTGFVVAKFGLPYAPPLTFLLLRFAGVLLVLLPLVLLMRAPWPAGQV 74 Query: 75 RHVAVAGVLLQAGYLAGVWCAIKIGMPAGLSALIVGLQPILTAFAAPLLGESVKGRQWIG 134 RH+A+AG+LLQ GYLAGVWCAIK+GMPAG+SALIVG+QPILTAFAAPL+GESV+ RQW+G Sbjct: 75 RHIALAGILLQGGYLAGVWCAIKLGMPAGVSALIVGMQPILTAFAAPLIGESVRPRQWLG 134 Query: 135 LALGLCGVGLVVANKISLIGLSTASIALCVFALLCITAGTLYQKRYCAHFDLRTGTAIQF 194 L LG+CGVGLVVA K+SLIGLS SI+LC+ ALL IT GTLYQKR C FDLRTGT IQF Sbjct: 135 LLLGICGVGLVVAAKVSLIGLSWQSISLCLLALLSITLGTLYQKRNCPQFDLRTGTIIQF 194 Query: 195 MASIVVVLPFAVAVEGLDWQLSNVHWTPQFIGALLWSVLALSIGAIFLLFALIRRSAATS 254 ASIVV+LPFA+ E L L V WTP+FIGALLWS+LALSIGAIFLLFALIR+SAAT Sbjct: 195 AASIVVLLPFAIFYEHLGPSLDTVQWTPRFIGALLWSILALSIGAIFLLFALIRKSAATR 254 Query: 255 VTSLLYLTPPTTAVMAWLMFGEAFSLIGALGMLVGVIGVAFVVRK 299 VTSLLYLTPPTTA+MAWLMFGE F+L+G GM V ++GV FV++K Sbjct: 255 VTSLLYLTPPTTALMAWLMFGEVFNLLGMAGMAVAILGVVFVMKK 299 >ref|YP_001099133.1| hypothetical protein HEAR0815 [Herminiimonas arsenicoxydans] emb|CAL61006.1| Conserved hypothetical protein, putative permease of the drug/metabolite transporter (DMT) superfamily [Herminiimonas arsenicoxydans] Length = 298 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 222/284 (78%), Positives = 244/284 (85%) Query: 16 MSLVPLLFVLIWSTGFIVAKFGLPYAPPLTFLLLRFTGVLVVLLPLVLLFRAPWPHGRIR 75 M LVP FVLIWSTGFIVAKFGLPYAPPLTFLLLRF GVLVVLLPLVLL RAPWP G +R Sbjct: 15 MPLVPFFFVLIWSTGFIVAKFGLPYAPPLTFLLLRFLGVLVVLLPLVLLLRAPWPLGSMR 74 Query: 76 HVAVAGVLLQAGYLAGVWCAIKIGMPAGLSALIVGLQPILTAFAAPLLGESVKGRQWIGL 135 H+AVAG+L+QAGYLAGVWCAIK+GMPAGLSALIVG+QP+LTAFAAPL+GE V+GRQWIGL Sbjct: 75 HIAVAGILVQAGYLAGVWCAIKLGMPAGLSALIVGMQPVLTAFAAPLIGEKVRGRQWIGL 134 Query: 136 ALGLCGVGLVVANKISLIGLSTASIALCVFALLCITAGTLYQKRYCAHFDLRTGTAIQFM 195 GLCGV LVVANKI+L GLS SIALC+ ALL IT GT+YQKRYC HFDLRTGT IQF Sbjct: 135 VCGLCGVALVVANKITLTGLSWQSIALCMMALLSITIGTMYQKRYCPHFDLRTGTIIQFA 194 Query: 196 ASIVVVLPFAVAVEGLDWQLSNVHWTPQFIGALLWSVLALSIGAIFLLFALIRRSAATSV 255 AS VVVLP A+ +E L V WTP FI ALLW++LALSIG+IFLLF LIR+SAAT V Sbjct: 195 ASSVVVLPLAIWLEDFSPALQTVQWTPNFIIALLWAILALSIGSIFLLFTLIRKSAATQV 254 Query: 256 TSLLYLTPPTTAVMAWLMFGEAFSLIGALGMLVGVIGVAFVVRK 299 TSLLYLTPPTTA+MAW+ FGE FSLIGA GML+ VIGV FVV+K Sbjct: 255 TSLLYLTPPTTALMAWVAFGEVFSLIGAAGMLLAVIGVVFVVKK 298