BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0274.p (282 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775061.1| deacetylase [Herbaspirillum seropedicae SmR1... 490 e-136 ref|YP_004753691.1| Deacetylase [Collimonas fungivorans Ter331] ... 365 3e-99 ref|YP_003745518.1| histone deacetylase [Ralstonia solanacearum ... 354 8e-96 emb|CBJ37806.1| Histone deacetylase [Ralstonia solanacearum CMR15] 349 3e-94 ref|ZP_00942919.1| Deacetylase [Ralstonia solanacearum UW551] >g... 348 5e-94 >ref|YP_003775061.1| deacetylase [Herbaspirillum seropedicae SmR1] gb|ADJ63153.1| deacetylase protein [Herbaspirillum seropedicae SmR1] Length = 331 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 255/282 (90%), Positives = 268/282 (95%) Query: 1 MVKYRMIREGAAAAVPDLDFHEAQPASDGELALAHHPDYIARASAGQLTAAEQREIGFPW 60 MVKYRMIREGAA VP L+FHEA PASDGELALAHHPDYI RAS G+LTAAEQREIGFPW Sbjct: 36 MVKYRMIREGAARTVPGLEFHEAMPASDGELALAHHPDYIGRASRGELTAAEQREIGFPW 95 Query: 61 SPQMVERSRRSSGATIAACRAAFSEGIAVNLAGGTHHAYADHGAGFCVFNDAAIAARLMQ 120 SP+MVERSRRSSGATIAACRAAFSEG+AVNLAGGTHHAY DHGAGFCVFNDAAIAARLMQ Sbjct: 96 SPEMVERSRRSSGATIAACRAAFSEGVAVNLAGGTHHAYGDHGAGFCVFNDAAIAARLMQ 155 Query: 121 AERRAARVAIVDLDVHQGNGTASILARDDSVFTLSLHGENNYPFEKEQSDLDVALPDGVG 180 AERRAARVAIVDLDVHQGNGTA+ILARDDSVFTLSLHG+NNYPFEKEQSDLDVALPDGVG Sbjct: 156 AERRAARVAIVDLDVHQGNGTAAILARDDSVFTLSLHGQNNYPFEKEQSDLDVALPDGVG 215 Query: 181 DADYLQALRDALHTLQQRFAPQLLIYLAGADPHEGDRLGKMKLTLGGLAARDETVFGYAR 240 D DYL AL+ AL TLQQRFAPQLLIYLAGADPHEGDRLGKMKL+L GLAARD+ VF YAR Sbjct: 216 DEDYLCALQQALATLQQRFAPQLLIYLAGADPHEGDRLGKMKLSLAGLAARDQAVFSYAR 275 Query: 241 EHKIPVAVTMAGGYGRDIEQTVAVHIQTIRLASLHAARWSAR 282 EH+IPVAVTMAGGYGR+IEQTVAVH+QTIRLASLHAARWS+R Sbjct: 276 EHEIPVAVTMAGGYGREIEQTVAVHLQTIRLASLHAARWSSR 317 >ref|YP_004753691.1| Deacetylase [Collimonas fungivorans Ter331] gb|AEK62868.1| Deacetylase [Collimonas fungivorans Ter331] Length = 311 Score = 365 bits (938), Expect = 3e-99, Method: Composition-based stats. Identities = 195/278 (70%), Positives = 225/278 (80%), Gaps = 2/278 (0%) Query: 1 MVKYRMIREGAAAAVPDLDFHEAQPASDGELALAHHPDYIARASAGQLTAAEQREIGFPW 60 M KYR+I E A + D+DFHEA SDG LALAHHP YI+ SAG L + Q+ IGFPW Sbjct: 21 MQKYRLIHEAALRTISDIDFHEAPTTSDGVLALAHHPHYISAVSAGTLPESVQKAIGFPW 80 Query: 61 SPQMVERSRRSSGATIAACRAAFSEG--IAVNLAGGTHHAYADHGAGFCVFNDAAIAARL 118 +PQMVERSRRS+GATIAACRAA ++ IAVNLAGGTHHA+AD GAGFCVFNDAAIAARL Sbjct: 81 TPQMVERSRRSAGATIAACRAALTDPGRIAVNLAGGTHHAFADQGAGFCVFNDAAIAARL 140 Query: 119 MQAERRAARVAIVDLDVHQGNGTASILARDDSVFTLSLHGENNYPFEKEQSDLDVALPDG 178 MQAERR RVAIVDLDVHQGNGTASILA DDSVFTLSLHGE NYPF+KE+SDLDVAL DG Sbjct: 141 MQAERRVQRVAIVDLDVHQGNGTASILANDDSVFTLSLHGERNYPFDKERSDLDVALADG 200 Query: 179 VGDADYLQALRDALHTLQQRFAPQLLIYLAGADPHEGDRLGKMKLTLGGLAARDETVFGY 238 GD YL AL+DAL + +RF+PQL+I+LAGADPHEGDRLG++KL+ GLA RD + Sbjct: 201 TGDQAYLSALQDALAAMLERFSPQLIIFLAGADPHEGDRLGRLKLSFDGLARRDAMLLET 260 Query: 239 AREHKIPVAVTMAGGYGRDIEQTVAVHIQTIRLASLHA 276 A IPVA+ MAGGYG++I+ TVA+H+QTI LA+ A Sbjct: 261 AGRRAIPVAIAMAGGYGKNIQDTVAIHLQTISLAAYFA 298 >ref|YP_003745518.1| histone deacetylase [Ralstonia solanacearum CFBP2957] emb|CBJ42903.1| Histone deacetylase [Ralstonia solanacearum CFBP2957] Length = 324 Score = 354 bits (909), Expect = 8e-96, Method: Composition-based stats. Identities = 197/288 (68%), Positives = 221/288 (76%), Gaps = 8/288 (2%) Query: 1 MVKYRMIREGAAAAVPDLDFHEAQPASDGELALAHHPDYIARASAGQLTAAEQREIGFPW 60 M KY ++RE AA VP L HEA A D L LAH PDY+ AG+L A QREIGFPW Sbjct: 23 MRKYSLLRERIAAEVPGLVLHEAPRAGDDALLLAHAPDYVHAVGAGKLDPARQREIGFPW 82 Query: 61 SPQMVERSRRSSGATIAACRAAFSEGIAVNLAGGTHHAYADHGAGFCVFNDAAIAARLMQ 120 S MVERSRRS+GAT+AAC AA ++G AVNLAGGTHHAYAD G GFCVFNDAAIA+R MQ Sbjct: 83 SSAMVERSRRSAGATMAACEAAMADGTAVNLAGGTHHAYADKGGGFCVFNDAAIASRWMQ 142 Query: 121 AERRAAR------VAIVDLDVHQGNGTASILARDDSVFTLSLHGENNYPFEKEQSDLDVA 174 RR R VAIVDLDVHQGNGTASIL D SVFTLSLHGE NYPF KE SDLDV Sbjct: 143 --RRPGRAPEDFPVAIVDLDVHQGNGTASILRDDASVFTLSLHGEKNYPFRKEVSDLDVG 200 Query: 175 LPDGVGDADYLQALRDALHTLQQRFAPQLLIYLAGADPHEGDRLGKMKLTLGGLAARDET 234 LPDG GDA YL+AL AL TL RFAP+L+IYLAGADPHEGDRLG++KLT+ GLA RD+ Sbjct: 201 LPDGCGDAAYLEALAGALDTLAARFAPRLIIYLAGADPHEGDRLGRLKLTMDGLARRDQQ 260 Query: 235 VFGYAREHKIPVAVTMAGGYGRDIEQTVAVHIQTIRLASLHAARWSAR 282 VF +A +IP+A+TMAGGYG +I+ TVAVH QTI LA+ HA RW+AR Sbjct: 261 VFDFAFLQRIPIAITMAGGYGNNIDDTVAVHAQTIALAARHAVRWAAR 308 >emb|CBJ37806.1| Histone deacetylase [Ralstonia solanacearum CMR15] Length = 327 Score = 349 bits (895), Expect = 3e-94, Method: Composition-based stats. Identities = 191/275 (69%), Positives = 213/275 (77%), Gaps = 8/275 (2%) Query: 1 MVKYRMIREGAAAAVPDLDFHEAQPASDGELALAHHPDYIARASAGQLTAAEQREIGFPW 60 M KY ++RE A VP L HEA A D L LAH PDYI+ AG+L A QREIGFPW Sbjct: 27 MRKYSLLRERVMAEVPGLVMHEAPRAEDDALLLAHAPDYISAVGAGRLEPARQREIGFPW 86 Query: 61 SPQMVERSRRSSGATIAACRAAFSEGIAVNLAGGTHHAYADHGAGFCVFNDAAIAARLMQ 120 SP+MVERSRRS+GAT+AAC AA ++GIAVNLAGGTHHAYAD G GFCVFNDAAIA+R MQ Sbjct: 87 SPEMVERSRRSAGATMAACEAAMADGIAVNLAGGTHHAYADKGGGFCVFNDAAIASRWMQ 146 Query: 121 AERRAAR------VAIVDLDVHQGNGTASILARDDSVFTLSLHGENNYPFEKEQSDLDVA 174 RR R VAIVDLDVHQGNGTASIL D SVFTLS+HGE NYPF KE SDLDV Sbjct: 147 --RRLGRTPEHFPVAIVDLDVHQGNGTASILRDDSSVFTLSVHGEKNYPFRKEASDLDVG 204 Query: 175 LPDGVGDADYLQALRDALHTLQQRFAPQLLIYLAGADPHEGDRLGKMKLTLGGLAARDET 234 LPDG GDA YL+AL AL TL RFAP+L+IYLAGADPHEGDRLG+++LTL GLA RD Sbjct: 205 LPDGCGDAAYLEALAGALDTLAARFAPRLIIYLAGADPHEGDRLGRLRLTLDGLARRDRQ 264 Query: 235 VFGYAREHKIPVAVTMAGGYGRDIEQTVAVHIQTI 269 VF +A +IP+AVTMAGGYG +I+ TVAVH QTI Sbjct: 265 VFDFAFLRRIPIAVTMAGGYGNNIDDTVAVHAQTI 299 >ref|ZP_00942919.1| Deacetylase [Ralstonia solanacearum UW551] gb|EAP74673.1| Deacetylase [Ralstonia solanacearum UW551] Length = 324 Score = 348 bits (893), Expect = 5e-94, Method: Composition-based stats. Identities = 198/288 (68%), Positives = 221/288 (76%), Gaps = 8/288 (2%) Query: 1 MVKYRMIREGAAAAVPDLDFHEAQPASDGELALAHHPDYIARASAGQLTAAEQREIGFPW 60 M KY ++RE A VP L HEA A D L LAH PDYI AG+L A QREIGFPW Sbjct: 23 MRKYSLLRERIEAEVPGLVLHEAPRAGDDALLLAHAPDYIDAVGAGKLDPARQREIGFPW 82 Query: 61 SPQMVERSRRSSGATIAACRAAFSEGIAVNLAGGTHHAYADHGAGFCVFNDAAIAARLMQ 120 SP MVERSRRS+GAT+AAC AA ++GIAVNLAGGTHHAYAD G GFCVFNDAAIAAR MQ Sbjct: 83 SPAMVERSRRSAGATMAACEAAMADGIAVNLAGGTHHAYADKGGGFCVFNDAAIAARWMQ 142 Query: 121 AERRAAR------VAIVDLDVHQGNGTASILARDDSVFTLSLHGENNYPFEKEQSDLDVA 174 RR R VAIVDLDVHQGNGTASIL D SVFTLS+HGE NYPF KE SDLDV Sbjct: 143 --RRPGRAPGDFPVAIVDLDVHQGNGTASILRDDASVFTLSVHGEKNYPFRKEASDLDVG 200 Query: 175 LPDGVGDADYLQALRDALHTLQQRFAPQLLIYLAGADPHEGDRLGKMKLTLGGLAARDET 234 LPDG GDA YL+AL AL L RFAP+L+IYLAGADPHEGDRLG++KLT+ GLA RD+ Sbjct: 201 LPDGCGDAAYLEALAGALDALAARFAPRLIIYLAGADPHEGDRLGRLKLTMDGLARRDQQ 260 Query: 235 VFGYAREHKIPVAVTMAGGYGRDIEQTVAVHIQTIRLASLHAARWSAR 282 VF +A +IP+A+TMAGGYG +I+ TVAVH QTI LA+ HA RW+AR Sbjct: 261 VFDFAFLQRIPIAITMAGGYGNNIDDTVAVHAQTIALAAWHAVRWAAR 308