BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0269.p (328 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775057.1| transmembrane protein [Herbaspirillum serope... 632 e-179 ref|YP_004753696.1| putative transmembrane protein [Collimonas f... 429 e-118 ref|ZP_08272651.1| C-5 sterol desaturase [Oxalobacteraceae bacte... 419 e-115 ref|YP_004154114.1| fatty acid hydroxylase [Variovorax paradoxus... 351 1e-94 ref|YP_002943546.1| fatty acid hydroxylase [Variovorax paradoxus... 350 2e-94 >ref|YP_003775057.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ63149.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 328 Score = 632 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 311/328 (94%), Positives = 323/328 (98%) Query: 1 MIQTISDLFATVQGWLFETLVQPLVFFIGMGEFVEEAFTGTEFVLVGICELVILFLILRP 60 MIQTISDLFA VQGWLF+TLVQPLVFFIGMGEFVEEAFTGTEFVLVG+CELVILFLILRP Sbjct: 1 MIQTISDLFAAVQGWLFQTLVQPLVFFIGMGEFVEEAFTGTEFVLVGLCELVILFLILRP 60 Query: 61 LESAIPVHPITDPRARWNDFIYTVLQRLGIIPIVAFLLLDPALSYLSEALHLEGWGTFNL 120 LESAIPVHPITDPRARWNDFIYTVLQRLG+IPIVAFLLLDPALSYLSEALHLEGWG+FNL Sbjct: 61 LESAIPVHPITDPRARWNDFIYTVLQRLGVIPIVAFLLLDPALSYLSEALHLEGWGSFNL 120 Query: 121 DQVWPGVTDRALVSFLLYMVVLDLCEYIYHWAQHNVRWMWALHSLHHSQQNMNLWSDDRN 180 DQ+WPGVTD+ALVSFLLYMVVLDLCEY+YHWAQHNVRWMWALHSLHHSQQNMNLWSDDRN Sbjct: 121 DQIWPGVTDQALVSFLLYMVVLDLCEYVYHWAQHNVRWMWALHSLHHSQQNMNLWSDDRN 180 Query: 181 HMLDNLVHDIIFGLIAVLIGVEPSQYILLVSLSRMLQSLQHANVRIHFGRLGEYLLVSPR 240 HMLDNL HDIIFGLIAV IGVEPSQYILLVSLSRMLQSLQHANVRIHFGR+GEYLLVSPR Sbjct: 181 HMLDNLFHDIIFGLIAVFIGVEPSQYILLVSLSRMLQSLQHANVRIHFGRIGEYLLVSPR 240 Query: 241 FHRTHHAIGLGHESRGRNSLGGHNFAVLFPIWDVLFRTAHFSQGFAMTGVRDQLPPPAGK 300 FHRTHHA+GLGHESRGRNSLGGHNFAVLFPIWDVLFRTAHFSQGFAMTGVRDQLPPPAGK Sbjct: 241 FHRTHHAVGLGHESRGRNSLGGHNFAVLFPIWDVLFRTAHFSQGFAMTGVRDQLPPPAGK 300 Query: 301 GRDYGRGFWAQQWLGLKRLVEFTRRKPR 328 GRDYGRGFW QQWLG+KR+VEF+RRK R Sbjct: 301 GRDYGRGFWMQQWLGVKRIVEFSRRKVR 328 >ref|YP_004753696.1| putative transmembrane protein [Collimonas fungivorans Ter331] gb|AEK62873.1| putative transmembrane protein [Collimonas fungivorans Ter331] Length = 328 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 211/328 (64%), Positives = 268/328 (81%) Query: 1 MIQTISDLFATVQGWLFETLVQPLVFFIGMGEFVEEAFTGTEFVLVGICELVILFLILRP 60 M T+ D FA Q WLF+++VQPL+F G E++E+AF GTE+ L+G+CELV+LFLILRP Sbjct: 1 MTNTLIDWFAAAQAWLFQSVVQPLMFHAGFSEYLEDAFDGTEWFLIGVCELVVLFLILRP 60 Query: 61 LESAIPVHPITDPRARWNDFIYTVLQRLGIIPIVAFLLLDPALSYLSEALHLEGWGTFNL 120 LE+ IPVH +D RARW DF+YTVL RLG + F L+DP ++ +E LHL+G FNL Sbjct: 61 LEALIPVHSFSDRRARWIDFLYTVLYRLGAFSVFVFFLVDPLMAKATELLHLQGINPFNL 120 Query: 121 DQVWPGVTDRALVSFLLYMVVLDLCEYIYHWAQHNVRWMWALHSLHHSQQNMNLWSDDRN 180 + + PG+++R L++FLLY++VLDLCEY+YH AQH+ W+W LHSLHHSQQNMNLWSDDRN Sbjct: 121 ENLLPGMSERPLLTFLLYLLVLDLCEYLYHRAQHSFGWLWGLHSLHHSQQNMNLWSDDRN 180 Query: 181 HMLDNLVHDIIFGLIAVLIGVEPSQYILLVSLSRMLQSLQHANVRIHFGRLGEYLLVSPR 240 H+LD L+HD++ L+A+ IGVEP+QY+LLVS++RMLQSLQHANVRIHFGRLG+ ++VSPR Sbjct: 181 HLLDGLIHDVVMALVALAIGVEPAQYVLLVSITRMLQSLQHANVRIHFGRLGDAIVVSPR 240 Query: 241 FHRTHHAIGLGHESRGRNSLGGHNFAVLFPIWDVLFRTAHFSQGFAMTGVRDQLPPPAGK 300 FHR HHAIG+GHES+G +LGGHNF VLF WDVLFR+A+F + F TGVRDQLP + Sbjct: 241 FHRWHHAIGIGHESKGTGTLGGHNFGVLFAFWDVLFRSAYFGKTFEHTGVRDQLPTASRP 300 Query: 301 GRDYGRGFWAQQWLGLKRLVEFTRRKPR 328 RDYGRGFW+QQWLGLKR+VEF+RR+ R Sbjct: 301 ARDYGRGFWSQQWLGLKRMVEFSRRQSR 328 >ref|ZP_08272651.1| C-5 sterol desaturase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33874.1| C-5 sterol desaturase [Oxalobacteraceae bacterium IMCC9480] Length = 327 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 196/324 (60%), Positives = 252/324 (77%) Query: 1 MIQTISDLFATVQGWLFETLVQPLVFFIGMGEFVEEAFTGTEFVLVGICELVILFLILRP 60 MI + DLF VQGWLF+++++P ++ G+GEF E+AF GTE++L+G+CE+V+LF++LRP Sbjct: 1 MIAYLVDLFGQVQGWLFQSVIEPFIYLTGLGEFTEQAFEGTEWLLIGVCEIVLLFVLLRP 60 Query: 61 LESAIPVHPITDPRARWNDFIYTVLQRLGIIPIVAFLLLDPALSYLSEALHLEGWGTFNL 120 LE+ +P ITD RAR DF+YT + RLG + F +LDP + +L+ LHLEG FNL Sbjct: 61 LEALLPAQVITDKRARRIDFLYTAIHRLGAFTVAVFFVLDPLIDHLTGLLHLEGVRPFNL 120 Query: 121 DQVWPGVTDRALVSFLLYMVVLDLCEYIYHWAQHNVRWMWALHSLHHSQQNMNLWSDDRN 180 D +WPGVTD LV+FLLY+ VLD +Y YH H + W W LH LHHSQQ+MNLWSD+RN Sbjct: 121 DGLWPGVTDLPLVTFLLYLFVLDFFDYWYHRGSHQINWWWGLHGLHHSQQDMNLWSDNRN 180 Query: 181 HMLDNLVHDIIFGLIAVLIGVEPSQYILLVSLSRMLQSLQHANVRIHFGRLGEYLLVSPR 240 H+LD+ + DI +IA+ IGV P QY+LLV+ SR+LQSLQHANV+++FG LGE LLVSPR Sbjct: 181 HLLDDFMRDIYMAVIALAIGVPPGQYVLLVAASRILQSLQHANVKLYFGWLGERLLVSPR 240 Query: 241 FHRTHHAIGLGHESRGRNSLGGHNFAVLFPIWDVLFRTAHFSQGFAMTGVRDQLPPPAGK 300 +HR HH IG+GHES G+ SLGGHNFAVLFP+WD++FRTA+FS+ F TG+RDQLP P G Sbjct: 241 YHRVHHGIGIGHESYGKGSLGGHNFAVLFPVWDIVFRTANFSESFGPTGIRDQLPAPLGS 300 Query: 301 GRDYGRGFWAQQWLGLKRLVEFTR 324 GRDYG GFWAQQWLGLKR+ F + Sbjct: 301 GRDYGHGFWAQQWLGLKRMTGFDK 324 >ref|YP_004154114.1| fatty acid hydroxylase [Variovorax paradoxus EPS] gb|ADU36003.1| fatty acid hydroxylase [Variovorax paradoxus EPS] Length = 324 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 171/321 (53%), Positives = 230/321 (71%), Gaps = 1/321 (0%) Query: 1 MIQTISDLFATVQGWLFETLVQPLVFFIGMGEFVEEAFTGTEFVLVGICELVILFLILRP 60 MI ++DLF+ +QGW FE VQPLV+ +G+G + E+AF T ++LVG ++V+L ++ P Sbjct: 1 MIDWLTDLFSALQGWFFEAAVQPLVYAVGLGGWTEDAFDATGWLLVGFIQIVVLLAVIGP 60 Query: 61 LESAIPVHPITDPRARWNDFIYTVLQRLGIIPIVAFLLLDPALSYLSEALHLEGWGTFNL 120 L+ V P+ D A D +YT++ +LG+ + F L P +L GWGTF+L Sbjct: 61 LQRWRSVEPVVDRHAIRIDVLYTLIHKLGLFRLALFFTLQPFFDDALGSLRTAGWGTFHL 120 Query: 121 DQVWPGVTDRALVSFLLYMVVLDLCEYIYHWAQHNVRWMWALHSLHHSQQNMNLWSDDRN 180 D+VWPGVTD +V+F +Y+VVLD Y H QH W W LHSLHHSQ+ M +WSDDRN Sbjct: 121 DEVWPGVTDVPVVAFAIYLVVLDFVGYWIHRGQHQFNWWWGLHSLHHSQRQMTMWSDDRN 180 Query: 181 HMLDNLVHDIIFGLIAVLIGVEPSQYILLVSLSRMLQSLQHANVRIHFGRLGEYLLVSPR 240 H++D++VHD I ++A LIGV P Q+I V+ +++ +SLQHAN+R+ FG +GE L VSPR Sbjct: 181 HLVDDIVHDAIIVIVAQLIGVAPGQFIAFVAFTQLSESLQHANLRLSFGAIGERLWVSPR 240 Query: 241 FHRTHHAIGLGHESRGRNSLGGHNFAVLFPIWDVLFRTAHFSQGFAMTGVRDQLPPPA-G 299 FHR HH+IGLGHESRG+++LGGHNF VL P WD+LFRTA+F + TG+RDQ+ P A G Sbjct: 241 FHRLHHSIGLGHESRGKSTLGGHNFGVLLPWWDMLFRTANFEDRYDPTGIRDQVEPDASG 300 Query: 300 KGRDYGRGFWAQQWLGLKRLV 320 + RDYGRGFWAQQWLGLKR+V Sbjct: 301 RTRDYGRGFWAQQWLGLKRMV 321 >ref|YP_002943546.1| fatty acid hydroxylase [Variovorax paradoxus S110] gb|ACS18280.1| fatty acid hydroxylase [Variovorax paradoxus S110] Length = 324 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 172/320 (53%), Positives = 231/320 (72%), Gaps = 1/320 (0%) Query: 1 MIQTISDLFATVQGWLFETLVQPLVFFIGMGEFVEEAFTGTEFVLVGICELVILFLILRP 60 MI ++D F+ +QGW FETLVQPLVF +G+G + E+AF T ++LVG+ ++V+L ++ P Sbjct: 1 MIDRLTDAFSALQGWFFETLVQPLVFAVGLGGWTEDAFDATGWLLVGLIQVVVLLAVIGP 60 Query: 61 LESAIPVHPITDPRARWNDFIYTVLQRLGIIPIVAFLLLDPALSYLSEALHLEGWGTFNL 120 L+ V P+TD RA D +YT++ RLG+ + F L+P L GWGTF+L Sbjct: 61 LQRWRAVEPVTDRRAIRIDVLYTLIHRLGLFRLAMFFTLEPFFDEGIGFLRTAGWGTFHL 120 Query: 121 DQVWPGVTDRALVSFLLYMVVLDLCEYIYHWAQHNVRWMWALHSLHHSQQNMNLWSDDRN 180 D+VWPGVTD V+F +Y+VVLD Y H QH RW W LHSLHHSQ+ M +WSDDRN Sbjct: 121 DEVWPGVTDVPWVAFAIYLVVLDFVGYWIHRGQHQFRWWWGLHSLHHSQRQMTMWSDDRN 180 Query: 181 HMLDNLVHDIIFGLIAVLIGVEPSQYILLVSLSRMLQSLQHANVRIHFGRLGEYLLVSPR 240 H+LD+++HD + ++A LIGV P Q+I V+ +++ +SLQHAN+R+ FG +GE L +SPR Sbjct: 181 HLLDDIIHDTLIVIVAQLIGVAPGQFIAFVAFTQLSESLQHANLRLAFGAIGERLWISPR 240 Query: 241 FHRTHHAIGLGHESRGRNSLGGHNFAVLFPIWDVLFRTAHFSQGFAMTGVRDQLPPPA-G 299 FHR HH+IGLGHESRG ++LGG NF VL P WD+LFRT +F + + TG+RDQ+ P A G Sbjct: 241 FHRLHHSIGLGHESRGAHTLGGCNFGVLLPWWDMLFRTVNFEERYDPTGIRDQVEPDADG 300 Query: 300 KGRDYGRGFWAQQWLGLKRL 319 + RDYGRGFWAQQWLGLKR+ Sbjct: 301 RVRDYGRGFWAQQWLGLKRM 320