BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0268.p         (130 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775056.1| xylanase/chitin deacetylase [Herbaspirillum ...   248   2e-64
ref|YP_004753697.1| polysaccharide deacetylase [Collimonas fungi...   194   3e-48
ref|ZP_08272652.1| polysaccharide deacetylase [Oxalobacteraceae ...   188   2e-46
emb|CCA79137.1| putative lipoprotein, Glycoside hydrolase/deacet...   182   1e-44
ref|YP_003752752.1| lipoprotein, glycoside hydrolase/deacetylase...   180   7e-44

>ref|YP_003775056.1| xylanase/chitin deacetylase [Herbaspirillum seropedicae SmR1]
 gb|ADJ63148.1| xylanase/chitin deacetylase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 273

 Score =  248 bits (633), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 119/129 (92%), Positives = 124/129 (96%)

Query: 1   MKRVDQRFQQLTGHKLDPLWRAPGGRLTHNLLKAGEACGYAHVAWAPAGFSGDELPSDKF 60
           MKRVDQRFQ+LTG KLDPLWRAPGGRLT NLLKAG+ACGYAHVAWAPAGFSGDELPSDKF
Sbjct: 144 MKRVDQRFQELTGRKLDPLWRAPGGRLTPNLLKAGQACGYAHVAWAPAGFSGDELPSDKF 203

Query: 61  PNEMLLKKALDGLKDGDIFLAHMGIWSRQDPWAPAVLEPLISGLEQKGFCFATLREHPSY 120
           PNEMLLKKALDGLKDGDIFLAHMGIWSRQDPWAPAVLEPLI+GLE KGFCFATLR+HP+Y
Sbjct: 204 PNEMLLKKALDGLKDGDIFLAHMGIWSRQDPWAPAVLEPLITGLEHKGFCFATLRDHPAY 263

Query: 121 RHLFAAGKE 129
           RHLF  GKE
Sbjct: 264 RHLFTVGKE 272


>ref|YP_004753697.1| polysaccharide deacetylase [Collimonas fungivorans Ter331]
 gb|AEK62874.1| polysaccharide deacetylase [Collimonas fungivorans Ter331]
          Length = 256

 Score =  194 bits (494), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 89/121 (73%), Positives = 104/121 (85%)

Query: 1   MKRVDQRFQQLTGHKLDPLWRAPGGRLTHNLLKAGEACGYAHVAWAPAGFSGDELPSDKF 60
           + RVDQRFQ LTG  +D  WR PGG LT + L AGEACGY HVAWA AGFSGDELPSDK+
Sbjct: 118 LNRVDQRFQTLTGKHIDRFWRTPGGHLTPHTLAAGEACGYKHVAWAAAGFSGDELPSDKW 177

Query: 61  PNEMLLKKALDGLKDGDIFLAHMGIWSRQDPWAPAVLEPLISGLEQKGFCFATLREHPSY 120
           PN++LL++ L  LKDGDI +AH+GIWSR+DPWAPAVLEPLISGLE+KGFCFATLR+HP+Y
Sbjct: 178 PNQLLLERTLKNLKDGDIVMAHLGIWSRKDPWAPAVLEPLISGLEKKGFCFATLRDHPAY 237

Query: 121 R 121
           +
Sbjct: 238 K 238


>ref|ZP_08272652.1| polysaccharide deacetylase [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF33875.1| polysaccharide deacetylase [Oxalobacteraceae bacterium IMCC9480]
          Length = 270

 Score =  188 bits (477), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 89/125 (71%), Positives = 101/125 (80%)

Query: 1   MKRVDQRFQQLTGHKLDPLWRAPGGRLTHNLLKAGEACGYAHVAWAPAGFSGDELPSDKF 60
           + RV  RF  LTG  LDPLWRAPGG+LT  L  AG ACGYAHV WAPAGFSGDELPS  +
Sbjct: 142 LNRVATRFHALTGATLDPLWRAPGGKLTPQLRAAGAACGYAHVGWAPAGFSGDELPSQTW 201

Query: 61  PNEMLLKKALDGLKDGDIFLAHMGIWSRQDPWAPAVLEPLISGLEQKGFCFATLREHPSY 120
            N  LL+++L GLKDGDI +AH+GIWSR+DPWAPAVL+PL+SGLEQKGFCFATLR+HP Y
Sbjct: 202 SNAKLLQQSLAGLKDGDIVMAHLGIWSRKDPWAPAVLDPLLSGLEQKGFCFATLRDHPDY 261

Query: 121 RHLFA 125
           R   A
Sbjct: 262 RQHIA 266


>emb|CCA79137.1| putative lipoprotein, Glycoside hydrolase/deacetylase [blood
           disease bacterium R229]
          Length = 276

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 86/126 (68%), Positives = 101/126 (80%)

Query: 1   MKRVDQRFQQLTGHKLDPLWRAPGGRLTHNLLKAGEACGYAHVAWAPAGFSGDELPSDKF 60
           +KR   RF+ +TG  +DPLWRAPGG L+       + CGYAHVAWAPAGF GDELPS+++
Sbjct: 146 LKRSADRFRAMTGQPMDPLWRAPGGHLSATTQAWAKQCGYAHVAWAPAGFLGDELPSERY 205

Query: 61  PNEMLLKKALDGLKDGDIFLAHMGIWSRQDPWAPAVLEPLISGLEQKGFCFATLREHPSY 120
           PN MLL KAL  L+DGDI +AH+GIWSRQDPWAPA LEPLI+GLE+KGFCFATLR+HP Y
Sbjct: 206 PNAMLLDKALASLRDGDITMAHLGIWSRQDPWAPADLEPLITGLERKGFCFATLRDHPQY 265

Query: 121 RHLFAA 126
           R  FAA
Sbjct: 266 RAWFAA 271


>ref|YP_003752752.1| lipoprotein, glycoside hydrolase/deacetylase [Ralstonia
           solanacearum PSI07]
 emb|CBJ51477.1| putative lipoprotein, Glycoside hydrolase/deacetylase [Ralstonia
           solanacearum PSI07]
          Length = 275

 Score =  180 bits (456), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 84/125 (67%), Positives = 100/125 (80%)

Query: 1   MKRVDQRFQQLTGHKLDPLWRAPGGRLTHNLLKAGEACGYAHVAWAPAGFSGDELPSDKF 60
           +KR   RF+ +TG  +DPLWRAPGG L+       + CGYAHVAWAPAGF GDELPS+++
Sbjct: 145 LKRSADRFRAMTGQPMDPLWRAPGGHLSATTQAWAKQCGYAHVAWAPAGFLGDELPSERY 204

Query: 61  PNEMLLKKALDGLKDGDIFLAHMGIWSRQDPWAPAVLEPLISGLEQKGFCFATLREHPSY 120
           PN MLL KAL  L+DGDI +AH+GIWSRQDPWAPA LEPLI+GLE+KGFCFATLR+HP Y
Sbjct: 205 PNAMLLDKALASLRDGDITMAHLGIWSRQDPWAPADLEPLITGLERKGFCFATLRDHPQY 264

Query: 121 RHLFA 125
           +  FA
Sbjct: 265 KAWFA 269