BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0229.p (325 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773721.1| threonine dehydratase [Herbaspirillum serope... 567 e-160 ref|ZP_03832115.1| serine/threonine dehydratase [Pectobacterium ... 448 e-124 ref|ZP_06353025.1| threonine ammonia-lyase [Citrobacter youngae ... 447 e-124 ref|YP_050135.1| serine/threonine dehydratase [Pectobacterium at... 444 e-122 ref|ZP_04561849.1| serine/threonine dehydratase [Citrobacter sp.... 442 e-122 >ref|YP_003773721.1| threonine dehydratase [Herbaspirillum seropedicae SmR1] gb|ADJ61813.1| threonine dehydratase protein [Herbaspirillum seropedicae SmR1] Length = 326 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 304/325 (93%), Positives = 317/325 (97%) Query: 1 MIPVSSATESPSFADVLLAAERIKPWAHRTPVLRSRTADVEVGAQLFFKCENFQRMGAFK 60 MIPVSSATE PSFADVLLAAERIKPWAHRTPVLRSRTAD E+GAQLFFKCENFQRMGAFK Sbjct: 1 MIPVSSATELPSFADVLLAAERIKPWAHRTPVLRSRTADTELGAQLFFKCENFQRMGAFK 60 Query: 61 FRGAMNALSQFDSEQRKHGVITFSSGNHAQGTALAAQLLGIPAVIVMPEDAPAAKVAATR 120 FRGAMNAL+QFD+ QRKHGVITFSSGNHAQGTALAAQLLGIPAVIVMP+DAPAAKVAATR Sbjct: 61 FRGAMNALTQFDATQRKHGVITFSSGNHAQGTALAAQLLGIPAVIVMPQDAPAAKVAATR 120 Query: 121 GYGAEVVMYDRYTEDREAIGARLAAERKMTLIPPYDHPHVMAGQGTATLELLQETGPLDA 180 GYGAEVV YDRYTEDREAIGARLAAERKMTLIPPYDHPHVMAGQGTATLELLQETGPLDA Sbjct: 121 GYGAEVVTYDRYTEDREAIGARLAAERKMTLIPPYDHPHVMAGQGTATLELLQETGPLDA 180 Query: 181 LFVCLGGGGLLSGAALAARALSPDCKIYGVEPEAGNDGQQSLRAGQIVHIDTPKTIADGA 240 LFVCLGGGGLLSGAALAARALSP CKIYGVEP+AGNDGQQSLRAGQ+VHIDTPKTIADGA Sbjct: 181 LFVCLGGGGLLSGAALAARALSPACKIYGVEPQAGNDGQQSLRAGQVVHIDTPKTIADGA 240 Query: 241 QTQHLGKYTFDVIRQLVDDIHTVSDAELVSGLRFFAERMKMVVEPTGCLGFAAARKLKDQ 300 QTQHLGKYTF VIR+LVDDIHTVSD ELV+G+RFFAERMKMVVEPTGCLGFAAARKLKDQ Sbjct: 241 QTQHLGKYTFGVIRELVDDIHTVSDEELVAGMRFFAERMKMVVEPTGCLGFAAARKLKDQ 300 Query: 301 LQGKRVGVIISGGNIDLGKLSGYLS 325 LQGKRVGVIISGGN+DLGKL+ +L+ Sbjct: 301 LQGKRVGVIISGGNVDLGKLATFLA 325 >ref|ZP_03832115.1| serine/threonine dehydratase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 324 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 227/315 (72%), Positives = 261/315 (82%) Query: 11 PSFADVLLAAERIKPWAHRTPVLRSRTADVEVGAQLFFKCENFQRMGAFKFRGAMNALSQ 70 P++ DV+ AAERI +A++TPV+ SRT + GA+ FFKCEN QRMGAFKFRGAMNAL Q Sbjct: 7 PTYDDVVAAAERIDGYANKTPVMTSRTVNNAFGAEFFFKCENLQRMGAFKFRGAMNALLQ 66 Query: 71 FDSEQRKHGVITFSSGNHAQGTALAAQLLGIPAVIVMPEDAPAAKVAATRGYGAEVVMYD 130 F EQ+ GV+TFSSGNHAQ ALAA+LLGIPA IVMP DAPAAKVAATRGYG VV Y+ Sbjct: 67 FSDEQKAAGVVTFSSGNHAQAIALAAKLLGIPATIVMPHDAPAAKVAATRGYGGNVVEYN 126 Query: 131 RYTEDREAIGARLAAERKMTLIPPYDHPHVMAGQGTATLELLQETGPLDALFVCLGGGGL 190 RYTEDRE IG LA + +TLIPPYDHPHV+AGQGTA ELL+ETG LDALFVCLGGGGL Sbjct: 127 RYTEDREQIGNDLAKKYGLTLIPPYDHPHVIAGQGTAAKELLEETGELDALFVCLGGGGL 186 Query: 191 LSGAALAARALSPDCKIYGVEPEAGNDGQQSLRAGQIVHIDTPKTIADGAQTQHLGKYTF 250 LSG ALA R LSP CKIYGVEP AGNDGQQS R+G IVHIDTPKTIADGAQTQHLG YTF Sbjct: 187 LSGCALATRQLSPQCKIYGVEPLAGNDGQQSFRSGNIVHIDTPKTIADGAQTQHLGNYTF 246 Query: 251 DVIRQLVDDIHTVSDAELVSGLRFFAERMKMVVEPTGCLGFAAARKLKDQLQGKRVGVII 310 +IRQ VDDI TV+D +L+ +RF+ ERMK+VVEPTGCL FAAAR LK+ L+GKR+G+II Sbjct: 247 PLIRQNVDDILTVTDDDLIDAMRFYTERMKIVVEPTGCLSFAAARNLKESLRGKRIGIII 306 Query: 311 SGGNIDLGKLSGYLS 325 SGGN+D+ + +L+ Sbjct: 307 SGGNVDISRYGAFLT 321 >ref|ZP_06353025.1| threonine ammonia-lyase [Citrobacter youngae ATCC 29220] gb|EFE09030.1| threonine ammonia-lyase [Citrobacter youngae ATCC 29220] Length = 322 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 229/315 (72%), Positives = 269/315 (85%) Query: 11 PSFADVLLAAERIKPWAHRTPVLRSRTADVEVGAQLFFKCENFQRMGAFKFRGAMNALSQ 70 P + DV+ AAERI +A++TPV+ SRT + E GA++FFKCENFQRMGAFKFRGAMNAL Q Sbjct: 7 PDYNDVVAAAERIADYANKTPVMTSRTVNEEFGAEVFFKCENFQRMGAFKFRGAMNALRQ 66 Query: 71 FDSEQRKHGVITFSSGNHAQGTALAAQLLGIPAVIVMPEDAPAAKVAATRGYGAEVVMYD 130 F +QR GV+TFSSGNHAQ AL+A+LLGIPA I+MP DAPAAKVAAT+GYG VV+YD Sbjct: 67 FTPQQRAAGVVTFSSGNHAQAIALSAKLLGIPATIIMPHDAPAAKVAATKGYGGNVVVYD 126 Query: 131 RYTEDREAIGARLAAERKMTLIPPYDHPHVMAGQGTATLELLQETGPLDALFVCLGGGGL 190 RYTEDRE IG LA ++ +TLIPPYDHPHV+AGQGTAT EL++E GPLD LFVCLGGGGL Sbjct: 127 RYTEDREKIGRDLAEKQGLTLIPPYDHPHVIAGQGTATKELIEEVGPLDVLFVCLGGGGL 186 Query: 191 LSGAALAARALSPDCKIYGVEPEAGNDGQQSLRAGQIVHIDTPKTIADGAQTQHLGKYTF 250 LSG+ALAAR L PDC IYGVEPEAGNDGQQS R+G IVHIDTPKTIADGAQTQHLG+YTF Sbjct: 187 LSGSALAARHLPPDCIIYGVEPEAGNDGQQSFRSGNIVHIDTPKTIADGAQTQHLGQYTF 246 Query: 251 DVIRQLVDDIHTVSDAELVSGLRFFAERMKMVVEPTGCLGFAAARKLKDQLQGKRVGVII 310 +I+Q V+DI TVSD ELV+ ++F AERMK+VVEPTGCLGFAAAR K +LQGK+VG+II Sbjct: 247 QIIQQNVNDILTVSDNELVTAMKFIAERMKIVVEPTGCLGFAAARARKSELQGKKVGIII 306 Query: 311 SGGNIDLGKLSGYLS 325 SGGN+D+ + +L+ Sbjct: 307 SGGNVDISRYGEFLA 321 >ref|YP_050135.1| serine/threonine dehydratase [Pectobacterium atrosepticum SCRI1043] emb|CAG74942.1| catabolic threonine dehydratase [Pectobacterium atrosepticum SCRI1043] Length = 324 Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 227/315 (72%), Positives = 266/315 (84%) Query: 11 PSFADVLLAAERIKPWAHRTPVLRSRTADVEVGAQLFFKCENFQRMGAFKFRGAMNALSQ 70 P+F DV+ AAERI +A++TPV+ SRT + GA++FFKCENFQRMGAFKFRGAMNAL Q Sbjct: 7 PTFDDVVAAAERIDGYANKTPVMTSRTVNDAFGAEVFFKCENFQRMGAFKFRGAMNALLQ 66 Query: 71 FDSEQRKHGVITFSSGNHAQGTALAAQLLGIPAVIVMPEDAPAAKVAATRGYGAEVVMYD 130 F EQ+ GV+TFSSGNHAQ AL+A+LLGIPA IVMP DAPAAKVAATRGYG VV Y+ Sbjct: 67 FSDEQKAAGVVTFSSGNHAQAIALSAKLLGIPATIVMPHDAPAAKVAATRGYGGNVVEYN 126 Query: 131 RYTEDREAIGARLAAERKMTLIPPYDHPHVMAGQGTATLELLQETGPLDALFVCLGGGGL 190 RYTEDRE IG LA ++ +TLIPPYDHPHV+AGQGTA ELL+ETG LDALFVCLGGGGL Sbjct: 127 RYTEDREQIGRDLAEKQGLTLIPPYDHPHVIAGQGTAAKELLEETGELDALFVCLGGGGL 186 Query: 191 LSGAALAARALSPDCKIYGVEPEAGNDGQQSLRAGQIVHIDTPKTIADGAQTQHLGKYTF 250 L+G+AL+AR LSP CKIYGVEP AGNDGQQS R+G IVHIDTPKTIADGAQTQHLG YTF Sbjct: 187 LAGSALSARQLSPRCKIYGVEPLAGNDGQQSFRSGNIVHIDTPKTIADGAQTQHLGNYTF 246 Query: 251 DVIRQLVDDIHTVSDAELVSGLRFFAERMKMVVEPTGCLGFAAARKLKDQLQGKRVGVII 310 +IRQ VDDI TV+D +L+ +RF+AERMK+VVEPTGCL FAAAR L++ L GKR+G+II Sbjct: 247 PLIRQNVDDILTVTDDDLIDAMRFYAERMKIVVEPTGCLSFAAARNLRESLHGKRIGIII 306 Query: 311 SGGNIDLGKLSGYLS 325 SGGN+D+ + +L+ Sbjct: 307 SGGNVDISRYGAFLT 321 >ref|ZP_04561849.1| serine/threonine dehydratase [Citrobacter sp. 30_2] gb|EEH92825.1| serine/threonine dehydratase [Citrobacter sp. 30_2] Length = 322 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 227/315 (72%), Positives = 269/315 (85%) Query: 11 PSFADVLLAAERIKPWAHRTPVLRSRTADVEVGAQLFFKCENFQRMGAFKFRGAMNALSQ 70 P + DV AAERI +A++TPV+ SRT + E GA++FFKCEN QRMGAFKFRGAMNAL Q Sbjct: 7 PDYNDVAAAAERIADYANKTPVMTSRTVNEEFGAEVFFKCENLQRMGAFKFRGAMNALRQ 66 Query: 71 FDSEQRKHGVITFSSGNHAQGTALAAQLLGIPAVIVMPEDAPAAKVAATRGYGAEVVMYD 130 F +QR GV+TFSSGNHAQ AL+A+LLGIPA I+MP DAPAAKVAAT+GYG +V+ YD Sbjct: 67 FTPQQRAAGVVTFSSGNHAQAIALSAKLLGIPATIIMPHDAPAAKVAATKGYGGKVINYD 126 Query: 131 RYTEDREAIGARLAAERKMTLIPPYDHPHVMAGQGTATLELLQETGPLDALFVCLGGGGL 190 RYTEDRE IG LA ++ +TLIPPYDHPHV+AGQGTAT EL++E G LDALFVCLGGGGL Sbjct: 127 RYTEDREKIGRDLAEKQGLTLIPPYDHPHVIAGQGTATKELIEEVGQLDALFVCLGGGGL 186 Query: 191 LSGAALAARALSPDCKIYGVEPEAGNDGQQSLRAGQIVHIDTPKTIADGAQTQHLGKYTF 250 LSG+ALAAR LSPDC IYGVEPEAGNDGQQS R+G+IVHIDTPKTIADGAQTQHLG YTF Sbjct: 187 LSGSALAARHLSPDCIIYGVEPEAGNDGQQSFRSGKIVHIDTPKTIADGAQTQHLGNYTF 246 Query: 251 DVIRQLVDDIHTVSDAELVSGLRFFAERMKMVVEPTGCLGFAAARKLKDQLQGKRVGVII 310 +I+Q V+DI TVSDAEL++ ++F AERMK+VVEPTGCLGFAAAR K +L GK++G+II Sbjct: 247 QIIKQNVNDILTVSDAELIASMKFIAERMKIVVEPTGCLGFAAARARKAELHGKKIGIII 306 Query: 311 SGGNIDLGKLSGYLS 325 SGGN+D+ + S +L+ Sbjct: 307 SGGNVDISRYSEFLA 321