BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0227.p (257 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004753347.1| ABC transporter ATP-binding protein [Collimo... 333 1e-89 ref|NP_774759.1| ABC transporter ATP-binding protein [Bradyrhizo... 322 5e-86 ref|YP_002947450.1| ABC transporter related [Variovorax paradoxu... 320 2e-85 ref|YP_001523734.1| ABC transporter ATP-binding protein [Azorhiz... 315 5e-84 ref|ZP_06898019.1| ABC superfamily ATP binding cassette transpor... 313 2e-83 >ref|YP_004753347.1| ABC transporter ATP-binding protein [Collimonas fungivorans Ter331] gb|AEK62524.1| ABC transporter ATP-binding protein [Collimonas fungivorans Ter331] Length = 256 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 176/251 (70%), Positives = 204/251 (81%), Gaps = 1/251 (0%) Query: 1 MSKPIMISVRGLKKSFGDQTVLRDINLEIAKGEVVALIGPSGSGKSTLLRCLNLLAAPNH 60 M P MI++ LKK FGD TVL+DI+L+I KG VVA+IGPSGSGKSTLLRC+NLL P+ Sbjct: 1 MDNP-MIAISNLKKCFGDNTVLKDISLQIGKGSVVAMIGPSGSGKSTLLRCINLLTIPDA 59 Query: 61 GVIKIGGECFDFDQTVPEKLSDRTMARFRAQTGMVFQHFNLFPHMTVVQNVMEGPVTVLR 120 GV+ +GG+ FD R +A+FR++TGMVFQHFNLFPHMTV QNVMEG VTVL+ Sbjct: 60 GVVNVGGQSIIFDGKQTALPKARNLAKFRSKTGMVFQHFNLFPHMTVRQNVMEGMVTVLK 119 Query: 121 RPKAHAHAQAMKLLAQVGLAEKAEMYPEKLSGGQKQRVAIARALAMDPEVMLFDEATSAL 180 PK A A A LL +VGL+E+A+ YP LSGGQKQRVAIARALAM P+VMLFDEATSAL Sbjct: 120 IPKQEARAAADALLQRVGLSERADAYPSMLSGGQKQRVAIARALAMKPDVMLFDEATSAL 179 Query: 181 DPELVGEVLNVIKQLAERGMTMILVTHEIAFAREVADKVIFMRDGVVVEAGPPAQVIDAP 240 DPELVGEVLNVI+ LA GMTMILVTHEIAFA+EVAD+VIFMRDGVVVE+GPPA VID P Sbjct: 180 DPELVGEVLNVIRSLAAEGMTMILVTHEIAFAKEVADQVIFMRDGVVVESGPPAIVIDNP 239 Query: 241 TQAATQAFLAR 251 Q AT++FL+R Sbjct: 240 VQEATRSFLSR 250 >ref|NP_774759.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC53384.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 264 Score = 322 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 174/258 (67%), Positives = 206/258 (79%), Gaps = 3/258 (1%) Query: 1 MSKPIMISVRGLKKSFGDQTVLRDINLEIAKGEVVALIGPSGSGKSTLLRCLNLLAAPNH 60 MS I +R L+KSFG VL++I+L++AKG VVALIGPSGSGKSTLLRC+NLL P+ Sbjct: 1 MSDTSKIEIRALRKSFGSNEVLKNISLDVAKGGVVALIGPSGSGKSTLLRCVNLLVTPDG 60 Query: 61 GVIKIGGECFDFDQTVPEKLSD-RTMARFRAQTGMVFQHFNLFPHMTVVQNVMEGPVTVL 119 G +++G F F + KL D +T+ARFRA TGMVFQHFNLFPHMT +QNVMEGPVTV Sbjct: 61 GSVRVGDTRFQFGEGA--KLPDVKTLARFRATTGMVFQHFNLFPHMTTLQNVMEGPVTVR 118 Query: 120 RRPKAHAHAQAMKLLAQVGLAEKAEMYPEKLSGGQKQRVAIARALAMDPEVMLFDEATSA 179 R +A A A LA+VGLAEKA+ YP LSGGQKQRVAIARALAM+P+VMLFDEATSA Sbjct: 119 RMARADAEKLARAQLAKVGLAEKADQYPATLSGGQKQRVAIARALAMEPDVMLFDEATSA 178 Query: 180 LDPELVGEVLNVIKQLAERGMTMILVTHEIAFAREVADKVIFMRDGVVVEAGPPAQVIDA 239 LDPELVGEVL V+++LA GMTM++VTHEIAFAREVAD++IFMRDGVVVE GP QVID Sbjct: 179 LDPELVGEVLAVMQRLASEGMTMVIVTHEIAFAREVADRLIFMRDGVVVEEGPARQVIDN 238 Query: 240 PTQAATQAFLARVHKIAA 257 P +AAT+AFL+ H+ A Sbjct: 239 PQEAATRAFLSHFHRTGA 256 >ref|YP_002947450.1| ABC transporter related [Variovorax paradoxus S110] gb|ACS22184.1| ABC transporter related [Variovorax paradoxus S110] Length = 266 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 172/251 (68%), Positives = 201/251 (80%) Query: 1 MSKPIMISVRGLKKSFGDQTVLRDINLEIAKGEVVALIGPSGSGKSTLLRCLNLLAAPNH 60 M+ P +I + GL+KSFG VL+DI+L+I +G+VVA+IGPSGSGKSTLLRC+NLL P+ Sbjct: 1 MTTPTVIEIAGLRKSFGAHVVLKDISLKIERGQVVAMIGPSGSGKSTLLRCINLLTVPDG 60 Query: 61 GVIKIGGECFDFDQTVPEKLSDRTMARFRAQTGMVFQHFNLFPHMTVVQNVMEGPVTVLR 120 G I +G + F ++R +A+FRA TGMVFQHFNLFPHMT +QNVMEGPVTVL+ Sbjct: 61 GRIAVGDQAIQFSGRDTALPNERKLAKFRASTGMVFQHFNLFPHMTALQNVMEGPVTVLK 120 Query: 121 RPKAHAHAQAMKLLAQVGLAEKAEMYPEKLSGGQKQRVAIARALAMDPEVMLFDEATSAL 180 PKA A A+A LL +VGL E+A+ YP+KLSGGQKQRVAIARALAM P VMLFDEATSAL Sbjct: 121 TPKAQAAAEARALLQKVGLLERADYYPDKLSGGQKQRVAIARALAMKPNVMLFDEATSAL 180 Query: 181 DPELVGEVLNVIKQLAERGMTMILVTHEIAFAREVADKVIFMRDGVVVEAGPPAQVIDAP 240 DPELVGEVL VIK LA+ GMTMILVTHEI FAREVAD+VIFMRDGVV E GPP VID P Sbjct: 181 DPELVGEVLTVIKSLAKEGMTMILVTHEIGFAREVADQVIFMRDGVVAECGPPGIVIDNP 240 Query: 241 TQAATQAFLAR 251 Q +T+AFL R Sbjct: 241 QQESTRAFLGR 251 >ref|YP_001523734.1| ABC transporter ATP-binding protein [Azorhizobium caulinodans ORS 571] dbj|BAF86816.1| ABC transporter ATP-binding protein [Azorhizobium caulinodans ORS 571] Length = 266 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 169/249 (67%), Positives = 201/249 (80%), Gaps = 3/249 (1%) Query: 7 ISVRGLKKSFGDQTVLRDINLEIAKGEVVALIGPSGSGKSTLLRCLNLLAAPNHGVIKIG 66 I V L+K FGD VL+DINL + G VVALIGPSGSGKSTLLRC+NLL P+ G +++G Sbjct: 11 IEVAALRKCFGDLEVLKDINLRVDAGGVVALIGPSGSGKSTLLRCMNLLVLPDGGRVRVG 70 Query: 67 GECFDFDQTVPEKLSD-RTMARFRAQTGMVFQHFNLFPHMTVVQNVMEGPVTVLRRPKAH 125 G+ F F ++L + +ARFRA TGMVFQHFNLFPHM+V+ NVMEGP+TV KA Sbjct: 71 GDSFAFGSG--DRLPGVKEIARFRANTGMVFQHFNLFPHMSVLANVMEGPLTVRGMKKAQ 128 Query: 126 AHAQAMKLLAQVGLAEKAEMYPEKLSGGQKQRVAIARALAMDPEVMLFDEATSALDPELV 185 A A +LL++VGLA+KA+ YP KLSGGQKQRVAIARALAM+PEVMLFDEATSALDPELV Sbjct: 129 AEPLARRLLSKVGLADKADAYPSKLSGGQKQRVAIARALAMEPEVMLFDEATSALDPELV 188 Query: 186 GEVLNVIKQLAERGMTMILVTHEIAFAREVADKVIFMRDGVVVEAGPPAQVIDAPTQAAT 245 GEVLNV++ LA GMTM++VTHEIAFAREVAD+V+FMRDGVVVE GP +VID P +AAT Sbjct: 189 GEVLNVMRGLAAEGMTMVIVTHEIAFAREVADRVVFMRDGVVVEEGPAREVIDTPREAAT 248 Query: 246 QAFLARVHK 254 +AFL+ HK Sbjct: 249 RAFLSHFHK 257 >ref|ZP_06898019.1| ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] gb|EFH10276.1| ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] Length = 256 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 167/249 (67%), Positives = 196/249 (78%), Gaps = 1/249 (0%) Query: 6 MISVRGLKKSFGDQTVLRDINLEIAKGEVVALIGPSGSGKSTLLRCLNLLAAPNHGVIKI 65 MI V L+K FG TVLRD+NL++ KGEVVALIGPSGSGKSTLLRCLNLL P+ G +++ Sbjct: 5 MIEVAALQKRFGSNTVLRDVNLQVRKGEVVALIGPSGSGKSTLLRCLNLLVVPDGGRVRV 64 Query: 66 GGECFDFDQTVPEKLSDRTMARFRAQTGMVFQHFNLFPHMTVVQNVMEGPVTVLRRPKAH 125 GG+ F F V + MARFRA TGMVFQ FNLFPHMTV+ NVMEGP+TV R P+ Sbjct: 65 GGQSFAFGGAVSLP-GTQAMARFRAATGMVFQQFNLFPHMTVLANVMEGPLTVRRMPRPE 123 Query: 126 AHAQAMKLLAQVGLAEKAEMYPEKLSGGQKQRVAIARALAMDPEVMLFDEATSALDPELV 185 A A A LL +VGL +KA YP +LSGGQKQRVAIARALAM P VMLFDEATSALDPELV Sbjct: 124 AEALARGLLGKVGLEDKAGQYPSRLSGGQKQRVAIARALAMQPAVMLFDEATSALDPELV 183 Query: 186 GEVLNVIKQLAERGMTMILVTHEIAFAREVADKVIFMRDGVVVEAGPPAQVIDAPTQAAT 245 GEVL V++ LA GMTM++VTHEIAFAR+VAD+V+F+RDGV+VE GP QVID P + AT Sbjct: 184 GEVLAVMQSLAAEGMTMVIVTHEIAFARDVADRVVFLRDGVIVEDGPARQVIDTPREEAT 243 Query: 246 QAFLARVHK 254 +AFL+ H+ Sbjct: 244 RAFLSHFHR 252