BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0226.p (219 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004753346.1| polar amino acid ABC transporter inner membr... 295 3e-78 gb|EGH71535.1| ABC transporter permease protein [Pseudomonas syr... 265 5e-69 ref|YP_001523733.1| ABC transporter permease [Azorhizobium cauli... 257 7e-67 ref|YP_001770447.1| polar amino acid ABC transporter inner membr... 254 8e-66 ref|YP_002947449.1| polar amino acid ABC transporter, inner memb... 254 9e-66 >ref|YP_004753346.1| polar amino acid ABC transporter inner membrane subunit [Collimonas fungivorans Ter331] gb|AEK62523.1| polar amino acid ABC transporter, inner membrane subunit [Collimonas fungivorans Ter331] Length = 222 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 156/214 (72%), Positives = 187/214 (87%) Query: 1 MYSWDFGMLWQYRGIIVSGVITTVLFTAVVVITGLLVGVLVGLGRVSSNRTLCGVLRGYV 60 MY WDF LWQYR II++G TV +T +VVI GLLVG++ GL R+S + G R YV Sbjct: 1 MYQWDFHTLWQYRNIILTGFGYTVGYTVIVVILGLLVGLIAGLCRLSPKVYISGPFRAYV 60 Query: 61 EVFRCTPVLVQLIWFYYALPVLLGIELSPWMAAALALTLYGGAFYSEIVRGGIVSIDAGQ 120 E+FRCTPVLVQLIWFYYALP+L GIEL+P MAA L+LTLYGGAFYSEI+RGG++SID GQ Sbjct: 61 ELFRCTPVLVQLIWFYYALPILTGIELTPGMAAVLSLTLYGGAFYSEIIRGGVISIDPGQ 120 Query: 121 TEAGQAIGMTRWQVMRRLILPQAFRRMTPPLVSQSIMQLKNTSLLSVLAVPDLVYQGQLI 180 +EAG A+GMT++Q+MRR++LPQAF+RMTPPLVSQSIMQLKNTSLLSVLAVPDL+YQGQ+I Sbjct: 121 SEAGMALGMTQFQLMRRVVLPQAFKRMTPPLVSQSIMQLKNTSLLSVLAVPDLLYQGQII 180 Query: 181 AHDTYRPLEIYTLVAVLYFIILFPATVVAKRLEL 214 AHDTYRPLEIY+L+A+LYF IL PAT++AKRLE+ Sbjct: 181 AHDTYRPLEIYSLIAILYFAILLPATILAKRLEV 214 >gb|EGH71535.1| ABC transporter permease protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 223 Score = 265 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 136/213 (63%), Positives = 175/213 (82%) Query: 1 MYSWDFGMLWQYRGIIVSGVITTVLFTAVVVITGLLVGVLVGLGRVSSNRTLCGVLRGYV 60 +Y WDF L QY+ ++++G+ T+ T I G+LVG+L L R+S+N+ LC R YV Sbjct: 3 VYHWDFLSLLQYKQLLITGLWYTLGTTVACTILGMLVGILTALPRLSNNKVLCAPFRAYV 62 Query: 61 EVFRCTPVLVQLIWFYYALPVLLGIELSPWMAAALALTLYGGAFYSEIVRGGIVSIDAGQ 120 E+FRCTPVLVQL+WFYYALPV+ G+++ AA L L+LYGGAFYSEI RGGI+SID GQ Sbjct: 63 EIFRCTPVLVQLVWFYYALPVVTGMQIGAMTAALLCLSLYGGAFYSEIFRGGIMSIDEGQ 122 Query: 121 TEAGQAIGMTRWQVMRRLILPQAFRRMTPPLVSQSIMQLKNTSLLSVLAVPDLVYQGQLI 180 +EA +A+GM R+QVM R+++PQA RRM PPLV+QSIMQLKNTSLLSVLA+PDL+YQGQ+I Sbjct: 123 SEAARALGMRRFQVMWRIVIPQALRRMIPPLVNQSIMQLKNTSLLSVLALPDLLYQGQVI 182 Query: 181 AHDTYRPLEIYTLVAVLYFIILFPATVVAKRLE 213 AHD+YRPLE+Y++VAV YFIIL PAT+++KRLE Sbjct: 183 AHDSYRPLEVYSVVAVAYFIILLPATIISKRLE 215 >ref|YP_001523733.1| ABC transporter permease [Azorhizobium caulinodans ORS 571] dbj|BAF86815.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 220 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 131/213 (61%), Positives = 175/213 (82%) Query: 1 MYSWDFGMLWQYRGIIVSGVITTVLFTAVVVITGLLVGVLVGLGRVSSNRTLCGVLRGYV 60 MY WDFG++W YR +++ G+ TV FT +V+ GL +G+L GL ++S R + + Y+ Sbjct: 1 MYHWDFGLVWSYRWLLLDGLGVTVAFTIAIVVLGLAIGLLAGLAKLSPFRPVGWLASAYI 60 Query: 61 EVFRCTPVLVQLIWFYYALPVLLGIELSPWMAAALALTLYGGAFYSEIVRGGIVSIDAGQ 120 EVFRCTPVLVQLIWFYYA+P+L GIE+S + A LAL+LYGG+FY+EI+RGGIVSID GQ Sbjct: 61 EVFRCTPVLVQLIWFYYAMPILTGIEMSAFTAGILALSLYGGSFYAEIIRGGIVSIDRGQ 120 Query: 121 TEAGQAIGMTRWQVMRRLILPQAFRRMTPPLVSQSIMQLKNTSLLSVLAVPDLVYQGQLI 180 TEAG+A+GM Q+MRR++LPQA +RM PPL++QSI+Q KNTSL+SVLAVPDL+YQGQ+ Sbjct: 121 TEAGEALGMVPSQIMRRVVLPQALKRMVPPLMNQSIIQFKNTSLVSVLAVPDLLYQGQVA 180 Query: 181 AHDTYRPLEIYTLVAVLYFIILFPATVVAKRLE 213 AHD+YRPLE+YT++A++YF+ LFP TV+ +R E Sbjct: 181 AHDSYRPLELYTVIAIIYFLALFPLTVLVRRGE 213 >ref|YP_001770447.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gb|ACA18013.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 220 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 138/210 (65%), Positives = 172/210 (81%) Query: 1 MYSWDFGMLWQYRGIIVSGVITTVLFTAVVVITGLLVGVLVGLGRVSSNRTLCGVLRGYV 60 MY WDFG+LW YR ++++G+ TV FTA +V GL VG++ GL +S + G++ G+V Sbjct: 1 MYVWDFGVLWGYRWLLLNGLAVTVAFTAGIVALGLAVGLVGGLASLSRLALVRGLVLGFV 60 Query: 61 EVFRCTPVLVQLIWFYYALPVLLGIELSPWMAAALALTLYGGAFYSEIVRGGIVSIDAGQ 120 E+FRCTPVLVQLIWFYYALP+L G+E+SP A+ LAL+ YGG+FY+EI+R GIVSIDAGQ Sbjct: 61 EIFRCTPVLVQLIWFYYALPILTGLEMSPVTASLLALSCYGGSFYAEIIRAGIVSIDAGQ 120 Query: 121 TEAGQAIGMTRWQVMRRLILPQAFRRMTPPLVSQSIMQLKNTSLLSVLAVPDLVYQGQLI 180 EAG A+GMT Q MRR+ILPQAFRRM PPL++QSI+QLKNTSL+SVLAVPDLVYQ Q+ Sbjct: 121 GEAGAALGMTPGQTMRRIILPQAFRRMVPPLMNQSIIQLKNTSLVSVLAVPDLVYQAQVA 180 Query: 181 AHDTYRPLEIYTLVAVLYFIILFPATVVAK 210 AHD+YRPLE YT VAV YF+ILFP TV+ + Sbjct: 181 AHDSYRPLETYTAVAVAYFVILFPLTVLVR 210 >ref|YP_002947449.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] gb|ACS22183.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 264 Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 149/212 (70%), Positives = 184/212 (86%) Query: 2 YSWDFGMLWQYRGIIVSGVITTVLFTAVVVITGLLVGVLVGLGRVSSNRTLCGVLRGYVE 61 Y WDF +LW+YR +++SG++ T+LFT V V+ GLLVGV+ GLGR+S+N + LR Y+E Sbjct: 46 YDWDFAVLWKYRSLLISGLLYTLLFTVVCVVLGLLVGVVTGLGRLSTNPYITAPLRAYIE 105 Query: 62 VFRCTPVLVQLIWFYYALPVLLGIELSPWMAAALALTLYGGAFYSEIVRGGIVSIDAGQT 121 VFRCTPVLVQL+WFYYALPVL G+ELS AA L LTLYGGAFYSEIVRGGI+SI+AGQT Sbjct: 106 VFRCTPVLVQLVWFYYALPVLTGLELSATAAATLCLTLYGGAFYSEIVRGGIISIEAGQT 165 Query: 122 EAGQAIGMTRWQVMRRLILPQAFRRMTPPLVSQSIMQLKNTSLLSVLAVPDLVYQGQLIA 181 EAG+A+GMTR Q++RR++LPQAF++M PPL+SQSIMQLKNTSLLSVLAVPDL+YQGQ+IA Sbjct: 166 EAGKALGMTRLQLLRRILLPQAFKKMVPPLMSQSIMQLKNTSLLSVLAVPDLLYQGQVIA 225 Query: 182 HDTYRPLEIYTLVAVLYFIILFPATVVAKRLE 213 HDTYRPLE+YT +A+ YF +L P T+ AKR+E Sbjct: 226 HDTYRPLELYTFIAIAYFAVLLPITIWAKRME 257