BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0224.p         (239 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774138.1| chloride-channel protein [Herbaspirillum ser...   319   3e-85
ref|YP_004754147.1| Cl- channel, voltage gated [Collimonas fungi...   201   9e-50
ref|YP_004359534.1| Cl- channel, voltage-gated family protein [B...   187   1e-45
ref|YP_004227322.1| Cl- channel voltage-gated family protein [Bu...   186   3e-45
ref|ZP_02363730.1| voltage gated chloride channel family protein...   184   7e-45

>ref|YP_003774138.1| chloride-channel protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ62230.1| chloride-channel protein [Herbaspirillum seropedicae SmR1]
          Length = 441

 Score =  319 bits (817), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 159/169 (94%), Positives = 167/169 (98%)

Query: 27  SASTEQQQERQLSLYQLSKSHLRRLWVEYGILWSGAIIVGLVAVLYAQAIELGFGVFRSI 86
           SAS+++QQERQLSLYQLSKSHLRRLWVEYGILWSGA+IVGLVAVLYAQAIE+GFGVFRSI
Sbjct: 4   SASSQEQQERQLSLYQLSKSHLRRLWVEYGILWSGAVIVGLVAVLYAQAIEIGFGVFRSI 63

Query: 87  EHRSPWLPLLLTPAVCAACVWLTRRYFPGSEGSGIPQAIATLHGDTAERGSVLLSIRVLV 146
           +HRSPWLPLLLTPAVCAACVWLTRRYFPGSEGSGIPQAIATLHGDTAERGS LLS+RVL+
Sbjct: 64  QHRSPWLPLLLTPAVCAACVWLTRRYFPGSEGSGIPQAIATLHGDTAERGSTLLSLRVLL 123

Query: 147 GKIVLSVVAIAGGMTIGREGPTVQIGAAIMYNLRRLYPTGYEHMERRLI 195
           GKIVLSVVAIAGGMTIGREGPTVQIGAAIMYNLRRLYP GYEHMERRLI
Sbjct: 124 GKIVLSVVAIAGGMTIGREGPTVQIGAAIMYNLRRLYPAGYEHMERRLI 172


>ref|YP_004754147.1| Cl- channel, voltage gated [Collimonas fungivorans Ter331]
 gb|AEK63324.1| Cl- channel, voltage gated [Collimonas fungivorans Ter331]
          Length = 461

 Score =  201 bits (510), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 96/149 (64%), Positives = 120/149 (80%)

Query: 47  HLRRLWVEYGILWSGAIIVGLVAVLYAQAIELGFGVFRSIEHRSPWLPLLLTPAVCAACV 106
            +RR W +YGILW GA++VGL+AVLYA  +++GFG+FRS++    WLPL +TPA+ A CV
Sbjct: 22  QVRRAWRKYGILWLGAVLVGLIAVLYAWLMDVGFGMFRSMQQSHFWLPLFVTPAIGALCV 81

Query: 107 WLTRRYFPGSEGSGIPQAIATLHGDTAERGSVLLSIRVLVGKIVLSVVAIAGGMTIGREG 166
           W TRRYFPGSEGSGIPQ IATL  DT++RG+ LLS+++L GKI +S V I GG TIGREG
Sbjct: 82  WATRRYFPGSEGSGIPQVIATLEEDTSKRGASLLSLKILAGKIGISFVGILGGFTIGREG 141

Query: 167 PTVQIGAAIMYNLRRLYPTGYEHMERRLI 195
           PTVQ+GAA+M+NLRRLYP     +ERRLI
Sbjct: 142 PTVQVGAALMFNLRRLYPRASAALERRLI 170


>ref|YP_004359534.1| Cl- channel, voltage-gated family protein [Burkholderia gladioli
           BSR3]
 gb|AEA59578.1| Cl- channel, voltage-gated family protein [Burkholderia gladioli
           BSR3]
          Length = 527

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 93/156 (59%), Positives = 119/156 (76%), Gaps = 1/156 (0%)

Query: 40  LYQLSKSHLRRLWVEYGILWSGAIIVGLVAVLYAQAIELGFGVFRSIEHRSPWLPLLLTP 99
           L+ L +  LR LW  YG+ W GAI+VG+VAVLYA+ I+ G+  FRS++H   WLPL+LTP
Sbjct: 8   LHTLPRRSLR-LWRLYGVFWLGAIVVGIVAVLYARLIDWGYNTFRSLQHEHAWLPLILTP 66

Query: 100 AVCAACVWLTRRYFPGSEGSGIPQAIATLHGDTAERGSVLLSIRVLVGKIVLSVVAIAGG 159
           AV AA VWLTRR+F G+EGSGIPQ IATL    A  GS LL++R+L GK+++S++ I GG
Sbjct: 67  AVAAASVWLTRRFFRGAEGSGIPQVIATLQASPAAFGSRLLTLRILFGKVLISLLGILGG 126

Query: 160 MTIGREGPTVQIGAAIMYNLRRLYPTGYEHMERRLI 195
            TIGREGPTVQIGAA+M+NLRR YP     +ER+L+
Sbjct: 127 FTIGREGPTVQIGAALMFNLRRFYPRSNALIERQLV 162


>ref|YP_004227322.1| Cl- channel voltage-gated family protein [Burkholderia sp.
           CCGE1001]
 gb|ADX54262.1| Cl- channel voltage-gated family protein [Burkholderia sp.
           CCGE1001]
          Length = 504

 Score =  186 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 91/147 (61%), Positives = 114/147 (77%)

Query: 49  RRLWVEYGILWSGAIIVGLVAVLYAQAIELGFGVFRSIEHRSPWLPLLLTPAVCAACVWL 108
           RRLW +YGI W GAI VGL+AVLYA+ I+ G+G FR+++    W PL++TPAV A  VWL
Sbjct: 17  RRLWRQYGIFWLGAIAVGLIAVLYARLIDWGYGEFRAVQQEHVWAPLVITPAVAALAVWL 76

Query: 109 TRRYFPGSEGSGIPQAIATLHGDTAERGSVLLSIRVLVGKIVLSVVAIAGGMTIGREGPT 168
           TR++F G+EGSGIPQ IATLH    E GS LLS R+L+GKI +S +AI GG TIGREGPT
Sbjct: 77  TRKFFRGAEGSGIPQVIATLHAKPGEYGSRLLSFRILLGKIAVSFLAILGGFTIGREGPT 136

Query: 169 VQIGAAIMYNLRRLYPTGYEHMERRLI 195
           VQ+GAA+M+NLRRLYP     +ER+L+
Sbjct: 137 VQVGAALMFNLRRLYPRSNALIERQLV 163


>ref|ZP_02363730.1| voltage gated chloride channel family protein [Burkholderia
           oklahomensis C6786]
          Length = 548

 Score =  184 bits (468), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 88/147 (59%), Positives = 115/147 (78%)

Query: 49  RRLWVEYGILWSGAIIVGLVAVLYAQAIELGFGVFRSIEHRSPWLPLLLTPAVCAACVWL 108
           +R+W +YG+ W GAI VGL+AV+YA+ I+ G+ VFR+++H  PWLP LLTPAV A  VWL
Sbjct: 15  QRIWRQYGVFWLGAIAVGLMAVVYARLIDWGYDVFRTLQHGRPWLPFLLTPAVAALSVWL 74

Query: 109 TRRYFPGSEGSGIPQAIATLHGDTAERGSVLLSIRVLVGKIVLSVVAIAGGMTIGREGPT 168
           TRR+F G+EGSGIPQ IATLH   +  GS LL++R+L GKI++S+  I GG TIGREGPT
Sbjct: 75  TRRFFRGAEGSGIPQVIATLHAQPSAFGSRLLTLRILFGKILISLFGIVGGFTIGREGPT 134

Query: 169 VQIGAAIMYNLRRLYPTGYEHMERRLI 195
           VQIGA++M+NLRR YP     +ER+L+
Sbjct: 135 VQIGASLMFNLRRFYPRSNALIERQLV 161