BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0220.p (281 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775012.1| integral membrane protein [Herbaspirillum se... 270 2e-70 ref|YP_004752091.1| hypothetical protein CFU_1436 [Collimonas fu... 190 2e-46 ref|YP_001352819.1| hypothetical protein mma_1129 [Janthinobacte... 186 3e-45 ref|YP_547292.1| hypothetical protein Bpro_0430 [Polaromonas sp.... 168 9e-40 ref|YP_004386573.1| hypothetical protein Alide2_0641 [Alicycliph... 167 2e-39 >ref|YP_003775012.1| integral membrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ63104.1| integral membrane protein [Herbaspirillum seropedicae SmR1] Length = 178 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 156/178 (87%), Positives = 162/178 (91%), Gaps = 5/178 (2%) Query: 109 MLRSESLFGKRETSSTNSPFSSAGNVS---STTGGNVTSVNKPTQYPSSVSNTAPAATEE 165 MLRSESLFGKRET+STNSPFSSA + + TGGNVTSVNKP QYPSSVS APA Sbjct: 1 MLRSESLFGKRETTSTNSPFSSASSNGSTSTPTGGNVTSVNKPAQYPSSVSTPAPAQAAA 60 Query: 166 --SGSKLTVGPNIKVKGEIEDCDTLVVEGKVQATINCRVVQIAERGAFKGSAEIDLAEIR 223 SGSKLTVGPNIKVKGEIEDCDTLVVEGKVQATINCRVVQIAERGAFKGSAEIDLAEIR Sbjct: 61 EESGSKLTVGPNIKVKGEIEDCDTLVVEGKVQATINCRVVQIAERGAFKGSAEIDLAEIR 120 Query: 224 GEFDGDLTVRQKLVIYSSGKVTGKIRYGKLVIEEGGQLAGDLQVGGGHEQKDLLQKTA 281 GEFDG+LTVRQKLVIY+SGKVTGKIRYGKLVIEEGGQLAGDLQVGGGHEQK+LLQKTA Sbjct: 121 GEFDGELTVRQKLVIYASGKVTGKIRYGKLVIEEGGQLAGDLQVGGGHEQKELLQKTA 178 >ref|YP_004752091.1| hypothetical protein CFU_1436 [Collimonas fungivorans Ter331] gb|AEK61268.1| hypothetical protein CFU_1436 [Collimonas fungivorans Ter331] Length = 176 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 108/163 (66%), Positives = 133/163 (81%), Gaps = 7/163 (4%) Query: 109 MLRSESLF--GKRETSSTNSPFSSAGNVSSTTGGNVTSVNKPTQYPSSVSNTAPAATEES 166 ML+SE+ F GKRET + NSPFS++ N++S + ++ N P P+S S ++T E Sbjct: 1 MLKSENSFFGGKRETPTPNSPFSASSNLTSGST-SIPKANNPVSTPASHS---ASSTNEV 56 Query: 167 GSKLTVGPNIKVKG-EIEDCDTLVVEGKVQATINCRVVQIAERGAFKGSAEIDLAEIRGE 225 GSKL VGPNIK+KG EI DCDTLVVEG+V+AT+N RV+ IAE+GAFKGSAEIDLAEI GE Sbjct: 57 GSKLIVGPNIKLKGVEITDCDTLVVEGRVEATMNSRVIHIAEKGAFKGSAEIDLAEIYGE 116 Query: 226 FDGDLTVRQKLVIYSSGKVTGKIRYGKLVIEEGGQLAGDLQVG 268 FDGDLTVR+KLVIYS+GKV+GKIRYGK+VIEEGGQL G++QVG Sbjct: 117 FDGDLTVREKLVIYSTGKVSGKIRYGKVVIEEGGQLTGEVQVG 159 >ref|YP_001352819.1| hypothetical protein mma_1129 [Janthinobacterium sp. Marseille] gb|ABR90592.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 226 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 108/191 (56%), Positives = 140/191 (73%), Gaps = 6/191 (3%) Query: 92 FSRVDFYASGTTISGDHMLRSESLFGKRETSSTNSPFSSAGNVSSTTGGNVTSVNKPTQY 151 +S + +S SGD MLRS++LFGKRE+++ N P S+ + + ++ +S Sbjct: 30 YSFIFITSSRQLFSGDFMLRSDTLFGKRESNTPNPPMSTTNSSTLSSSSTGSSSFPKAST 89 Query: 152 PSSVSNTAPAA----TEESGSKLTVGPNIKVKG-EIEDCDTLVVEGKVQATINCRVVQIA 206 P++ N++ A T E GSKL VGPNIK+KG EI DCDTLVVEG V+AT++ RV+QIA Sbjct: 90 PATGFNSSGATANQHTNEVGSKLIVGPNIKLKGVEITDCDTLVVEGFVEATMDSRVIQIA 149 Query: 207 ERGAFKGSAEIDLAEIRGEFDGDLTVRQKLVIYSSGKVTGKIRYGKLVIEEGGQLAGDLQ 266 + G+FKGSA ID+AEI G FDG+LTVRQKLVIY+SGKV+GKIRYG +VIEEGGQLAGD+Q Sbjct: 150 KDGSFKGSAGIDIAEIHGTFDGELTVRQKLVIYASGKVSGKIRYGNVVIEEGGQLAGDVQ 209 Query: 267 VGG-GHEQKDL 276 VGG G + K L Sbjct: 210 VGGTGAQAKSL 220 >ref|YP_547292.1| hypothetical protein Bpro_0430 [Polaromonas sp. JS666] gb|ABE42394.1| protein of unknown function DUF583 [Polaromonas sp. JS666] Length = 183 Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats. Identities = 98/163 (60%), Positives = 122/163 (74%), Gaps = 8/163 (4%) Query: 115 LFGKRET-SSTNSPFSSAGNVSSTTGGNVTSVNKPTQYPSSVSNTAP------AATEESG 167 FGKRE +ST SP + T G +++ + + SN P + ++E G Sbjct: 5 FFGKRENETSTTSPNLRGASNGYGTSGTSSTLQSASAAANQQSNAKPVNDASASTSKEGG 64 Query: 168 SKLTVGPNIKVKG-EIEDCDTLVVEGKVQATINCRVVQIAERGAFKGSAEIDLAEIRGEF 226 SKLTVGPNIK+KG EI DCDTLVVEG V+AT++ RV+QIAE+GAFKGSA+ID+AEIRGEF Sbjct: 65 SKLTVGPNIKLKGVEITDCDTLVVEGLVEATMDSRVIQIAEQGAFKGSADIDVAEIRGEF 124 Query: 227 DGDLTVRQKLVIYSSGKVTGKIRYGKLVIEEGGQLAGDLQVGG 269 +G+LTVRQKLVIYS+GKVTG IRYGKLVIEEGGQL+G++Q G Sbjct: 125 NGNLTVRQKLVIYSTGKVTGTIRYGKLVIEEGGQLSGEIQFGA 167 >ref|YP_004386573.1| hypothetical protein Alide2_0641 [Alicycliphilus denitrificans K601] gb|AEB83057.1| protein of unknown function DUF583 [Alicycliphilus denitrificans K601] Length = 186 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 99/163 (60%), Positives = 119/163 (73%), Gaps = 5/163 (3%) Query: 109 MLRSESLFGKRETSSTNSPFSSAGNVSSTTGGNVTSVNKPTQYPSSVSNTAPAATEESGS 168 M FGKRET S F SS GG+VTS + ++ A TE GS Sbjct: 1 MAVQNPFFGKRETES----FQPRQPSSSVLGGSVTSTAGASSNAAAAKPAASNTTESGGS 56 Query: 169 KLTVGPNIKVKG-EIEDCDTLVVEGKVQATINCRVVQIAERGAFKGSAEIDLAEIRGEFD 227 KLTVGPNIK+KG EI DCDTLVVEG V+AT++ RV+QIAE+GAF G+AEID+AEI GEFD Sbjct: 57 KLTVGPNIKLKGVEITDCDTLVVEGTVEATMDSRVIQIAEQGAFHGTAEIDIAEIHGEFD 116 Query: 228 GDLTVRQKLVIYSSGKVTGKIRYGKLVIEEGGQLAGDLQVGGG 270 G LTVR+KLVI+S+GKV+GKIRYGK+VIEEGGQL+G++ VG G Sbjct: 117 GTLTVREKLVIFSTGKVSGKIRYGKVVIEEGGQLSGEISVGVG 159