BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0219.p (287 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775009.1| hypothetical protein Hsero_1588 [Herbaspiril... 371 e-101 ref|YP_001857442.1| hypothetical protein Bphy_1212 [Burkholderia... 223 2e-56 ref|ZP_03270217.1| hypothetical protein BH160DRAFT_6496 [Burkhol... 222 5e-56 ref|YP_001889688.1| hypothetical protein Bphyt_5984 [Burkholderi... 221 1e-55 ref|ZP_06844095.1| conserved hypothetical protein [Burkholderia ... 216 2e-54 >ref|YP_003775009.1| hypothetical protein Hsero_1588 [Herbaspirillum seropedicae SmR1] gb|ADJ63101.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 240 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 196/238 (82%), Positives = 214/238 (89%) Query: 50 MSNDRIPSPESLDSFGAHLFPARRHSAARGTVAGLIAVISWFAFVAQTDITINRLLARGG 109 M++++ P PESLDSF L+P RR S+A +A LIA ISWFAFVAQTDITI+RLLARGG Sbjct: 1 MNHEQFPDPESLDSFAERLYPERRQSSAARALACLIASISWFAFVAQTDITISRLLARGG 60 Query: 110 GILDGLDRLTMYLTNLTILMSALCFTSLALSLRSPMSRFFRQPTVISAVVTYLAFVGIAY 169 G+LDGLDRLTMYLTNLTILMSALCFTSLALSL++P+SRFFRQP VI+AVVTYLAFVGIAY Sbjct: 61 GVLDGLDRLTMYLTNLTILMSALCFTSLALSLKTPLSRFFRQPAVITAVVTYLAFVGIAY 120 Query: 170 NLLLRHLWTPTGFRALVNESLHTVVPLLAIVYWIFFVPVFQASLKKALLWLVYPLGYLMV 229 NLLLR LWTPTGFRALVNESLHTVVPLLAIVYWIFFVPVFQAS +KALLWL YPLGYL + Sbjct: 121 NLLLRQLWTPTGFRALVNESLHTVVPLLAIVYWIFFVPVFQASWRKALLWLAYPLGYLFI 180 Query: 230 TLWRGALSGFYPYPFIDVNALGYPRVILNATLLFGAFVGLMALFIAVNRSGKPVLQGK 287 TLWRGALSGFYPYPFIDVNALGY RV +NA+LL F+GLMALFIAVNRSGKPVL K Sbjct: 181 TLWRGALSGFYPYPFIDVNALGYLRVAVNASLLLVGFLGLMALFIAVNRSGKPVLLRK 238 >ref|YP_001857442.1| hypothetical protein Bphy_1212 [Burkholderia phymatum STM815] gb|ACC70396.1| hypothetical protein Bphy_1212 [Burkholderia phymatum STM815] Length = 255 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 117/204 (57%), Positives = 151/204 (74%), Gaps = 3/204 (1%) Query: 57 SPESLDSFGAHLFPARRHSAARGTVAGLIAVISWFAFVAQTDITINRLLARGGGILDGLD 116 + ++L + G+ L P R A T+A IA+++W AF AQTDIT+ R+L+RG G+L G++ Sbjct: 10 ASDTLVAIGSEL-PLRAPDLASVTLAMSIALVAWLAFAAQTDITVLRMLSRGYGVLGGIE 68 Query: 117 RLTMYLTNLTILMSALCFTSLALSLRS--PMSRFFRQPTVISAVVTYLAFVGIAYNLLLR 174 RLT YLTNLTI A+CFT + R P+ RFFRQPTV++AV Y+ FVG AYNLLLR Sbjct: 69 RLTSYLTNLTIFTCAVCFTCVGFFARGKMPIVRFFRQPTVVTAVTCYIVFVGFAYNLLLR 128 Query: 175 HLWTPTGFRALVNESLHTVVPLLAIVYWIFFVPVFQASLKKALLWLVYPLGYLMVTLWRG 234 HLWTP+G+R ++NESLHT+VPLL +YW+ FVP F +L+ L WLVYPLGYL +T+ RG Sbjct: 129 HLWTPSGWRMVLNESLHTLVPLLDALYWLLFVPRFHLTLRHLLWWLVYPLGYLALTMARG 188 Query: 235 ALSGFYPYPFIDVNALGYPRVILN 258 A+S FYPYPFIDV LGY RV +N Sbjct: 189 AVSDFYPYPFIDVGELGYGRVFIN 212 >ref|ZP_03270217.1| hypothetical protein BH160DRAFT_6496 [Burkholderia sp. H160] gb|EDZ98196.1| hypothetical protein BH160DRAFT_6496 [Burkholderia sp. H160] Length = 227 Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 117/210 (55%), Positives = 156/210 (74%), Gaps = 1/210 (0%) Query: 69 FPARRHSAARGTVAGLIAVISWFAFVAQTDITINRLLARGGGILDGLDRLTMYLTNLTIL 128 P S + T+A +IAVI+W A AQ D+TI+R LARG + DGL R++ YLT+LT+L Sbjct: 13 LPLHTPSVSSLTLAAVIAVIAWMAIFAQADLTIDRTLARGLTVFDGLARMSSYLTHLTVL 72 Query: 129 MSALCFTSLAL-SLRSPMSRFFRQPTVISAVVTYLAFVGIAYNLLLRHLWTPTGFRALVN 187 A CFTS+AL RSP+ RFFRQPT ++AVV Y+ FVGIAYNLLLR LW + +R L+N Sbjct: 73 ACAFCFTSIALWKHRSPLVRFFRQPTAVTAVVAYMVFVGIAYNLLLRGLWPLSPYRRLLN 132 Query: 188 ESLHTVVPLLAIVYWIFFVPVFQASLKKALLWLVYPLGYLMVTLWRGALSGFYPYPFIDV 247 ESLH+V+P+LA +YW+ FVP F L+ LLWLVYPL YL +T RG LS FYPYPFI+V Sbjct: 133 ESLHSVLPMLATLYWVLFVPRFHLRLRDCLLWLVYPLVYLGITFGRGTLSDFYPYPFINV 192 Query: 248 NALGYPRVILNATLLFGAFVGLMALFIAVN 277 + LG +V++N+ LLFG+F+ ++A+F+ +N Sbjct: 193 DTLGLRQVLVNSALLFGSFLMVLAVFVGIN 222 >ref|YP_001889688.1| hypothetical protein Bphyt_5984 [Burkholderia phytofirmans PsJN] gb|ACD20317.1| hypothetical protein Bphyt_5984 [Burkholderia phytofirmans PsJN] Length = 227 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 114/185 (61%), Positives = 142/185 (76%), Gaps = 1/185 (0%) Query: 94 VAQTDITINRLLARGGGILDGLDRLTMYLTNLTILMSALCFTSLALSL-RSPMSRFFRQP 152 VAQ ++TI+R LARG +LDGL R++ YLTNLT L A+CFT +AL RS +RFFRQP Sbjct: 38 VAQAEVTIDRTLARGLSVLDGLARMSSYLTNLTALACAICFTCVALRRHRSTPARFFRQP 97 Query: 153 TVISAVVTYLAFVGIAYNLLLRHLWTPTGFRALVNESLHTVVPLLAIVYWIFFVPVFQAS 212 TV++AVV Y+AFVGIAYNLLLR WTPT FR L+NESLH+V+P+L+ +YW+ FVP F Sbjct: 98 TVVTAVVVYMAFVGIAYNLLLRGYWTPTAFRMLLNESLHSVLPMLSALYWVLFVPRFHLK 157 Query: 213 LKKALLWLVYPLGYLMVTLWRGALSGFYPYPFIDVNALGYPRVILNATLLFGAFVGLMAL 272 L+ L WLVYPL YL VT WRG LS FYPYPFI+V LG+ ++N+ LLFG F+ LMAL Sbjct: 158 LRHCLWWLVYPLTYLGVTFWRGRLSDFYPYPFINVERLGFTHAMVNSALLFGGFLMLMAL 217 Query: 273 FIAVN 277 F+ +N Sbjct: 218 FVGIN 222 >ref|ZP_06844095.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] gb|EFG68255.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] Length = 227 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 119/210 (56%), Positives = 154/210 (73%), Gaps = 1/210 (0%) Query: 69 FPARRHSAARGTVAGLIAVISWFAFVAQTDITINRLLARGGGILDGLDRLTMYLTNLTIL 128 P S + T+A ++AVI+W + VAQ D+TI+R LARG + DG R++ YLTNLT+L Sbjct: 13 LPLHTPSVSSVTLAAIVAVIAWISIVAQADVTIDRTLARGLTVFDGFARMSSYLTNLTVL 72 Query: 129 MSALCFTSLAL-SLRSPMSRFFRQPTVISAVVTYLAFVGIAYNLLLRHLWTPTGFRALVN 187 A+CFT +AL S RS +RFFRQPTV++AVV Y+ FVGIAYNLLLR LW+P FR L+N Sbjct: 73 ACAICFTCVALRSHRSAPARFFRQPTVVTAVVVYMVFVGIAYNLLLRGLWSPAAFRLLLN 132 Query: 188 ESLHTVVPLLAIVYWIFFVPVFQASLKKALLWLVYPLGYLMVTLWRGALSGFYPYPFIDV 247 ESLH+ +P+LA +Y + FVP F L+ LLWLVYPL YL VT WR +LS FYPYPFI+V Sbjct: 133 ESLHSALPMLAALYRVLFVPRFHLKLRHCLLWLVYPLAYLGVTFWRASLSDFYPYPFINV 192 Query: 248 NALGYPRVILNATLLFGAFVGLMALFIAVN 277 LG V++N+ LLFG F+ LMA+F+ +N Sbjct: 193 EMLGLRHVVVNSALLFGGFIMLMAVFVGIN 222