BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0216.p (356 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775007.1| alkanesulfonates ABC transporter periplasmic... 501 e-140 ref|YP_004752678.1| aliphatic sulfonates family ABC transporter ... 391 e-107 ref|XP_002535127.1| Taurine-binding periplasmic protein precurso... 365 6e-99 ref|YP_001565654.1| aliphatic sulfonate ABC transporter periplas... 364 9e-99 ref|YP_004487544.1| aliphatic sulfonates family ABC transporter ... 363 2e-98 >ref|YP_003775007.1| alkanesulfonates ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ63099.1| ABC-type alkanesulfonates transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 336 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 276/336 (82%), Positives = 299/336 (88%), Gaps = 2/336 (0%) Query: 23 MPQYEDKHQPALAAVELNSKRRRLIGAGLALGAAGAAAAFSPRLAHAAT-RQLRVGYQKG 81 MP + + A+ + +RRRLI + LGAA AA A P HAA RQLRVGYQKG Sbjct: 1 MPHDQAQRNKAIQTAVRSPRRRRLIAGAVTLGAAAAAGASLPAWVHAAAPRQLRVGYQKG 60 Query: 82 ALSIIRAHGTLEQRLASLGATVKWVEFSAGPVQLEALGAGSIDFGDVGEAPPIFSQAAGT 141 ALS+IRAHG LEQRLA LGATVKWVEFSAGPVQLEALGAGSIDFGDVGEAPPIF+QAAGT Sbjct: 61 ALSLIRAHGVLEQRLAPLGATVKWVEFSAGPVQLEALGAGSIDFGDVGEAPPIFAQAAGT 120 Query: 142 PLVYVGATVPRPYVEAILVKDDS-LQKPAQLKGKRIALNKGSNVHYFLVKLLEKHGLQYG 200 PLVYVGATVPRPYVEA+LVKDDS LQ+P QLKGKRIALNKGSNVHYFLVKLLEKHGL+YG Sbjct: 121 PLVYVGATVPRPYVEAVLVKDDSELQRPQQLKGKRIALNKGSNVHYFLVKLLEKHGLKYG 180 Query: 201 DVTPVWLAPADARAAFERGSVDAWAIWEPYLAAAQQTLKARILADADGVVKNRAYYFSTR 260 DVTPVWLAPADARAAFERG+VDAWAIWEPYLAAAQQ LKARILADADGVVKNRAYYFSTR Sbjct: 181 DVTPVWLAPADARAAFERGAVDAWAIWEPYLAAAQQGLKARILADADGVVKNRAYYFSTR 240 Query: 261 DYARDNADLIRIALEELAKVDEFAKTRPDDYASELAGILGLPKGVLDVVVRRYNYGTLPI 320 DYARD+ADL+RIALEEL K+D +A+ RPD+YASELAGILGLP+ VLDVVVRRY+YGTLPI Sbjct: 241 DYARDHADLLRIALEELGKIDAWAQARPDEYASELAGILGLPRSVLDVVVRRYHYGTLPI 300 Query: 321 THAILDEQQQIADTFLDLKLIPKKINLRETAPPWLA 356 T AILDEQQQIADTFLDL+LIP+KI+L E APPWLA Sbjct: 301 TRAILDEQQQIADTFLDLRLIPRKISLLEAAPPWLA 336 >ref|YP_004752678.1| aliphatic sulfonates family ABC transporter periplasmic ligand-binding protein [Collimonas fungivorans Ter331] gb|AEK61855.1| aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein [Collimonas fungivorans Ter331] Length = 343 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 206/316 (65%), Positives = 250/316 (79%), Gaps = 4/316 (1%) Query: 42 KRRRLIGAGLALGAAGAAAAFSPRLAHAATRQLRVGYQKGALSIIRAHGTLEQRLASLGA 101 +RRRL+ AG+ + A AA +P AA R+LRVGYQKG LS+++ GTLEQRLA LG Sbjct: 29 RRRRLLQAGIGMAAV---AALTPFAVRAAQRELRVGYQKGLLSLLKKRGTLEQRLAPLGV 85 Query: 102 TVKWVEFSAGPVQLEALGAGSIDFGDVGEAPPIFSQAAGTPLVYVGATVPRPYVEAILVK 161 VKW+EFSAGPVQLEAL GSIDFGDVGEAPPIF+QA GTP+VYV ATVPRP VEA+LV Sbjct: 86 AVKWIEFSAGPVQLEALNVGSIDFGDVGEAPPIFAQANGTPIVYVAATVPRPAVEAVLVP 145 Query: 162 DDS-LQKPAQLKGKRIALNKGSNVHYFLVKLLEKHGLQYGDVTPVWLAPADARAAFERGS 220 S ++ A LKGK+IALNKGSNVHYFLVKLL+K+GL Y DV VWLAPADARAAFE+G Sbjct: 146 ATSAIRAVADLKGKKIALNKGSNVHYFLVKLLQKNGLNYSDVNLVWLAPADARAAFEKGV 205 Query: 221 VDAWAIWEPYLAAAQQTLKARILADADGVVKNRAYYFSTRDYARDNADLIRIALEELAKV 280 VDAW IWEP+ AAA+QTL ARILADA GVVKNRAYYFS++DYA+ N D++ IA+EEL K+ Sbjct: 206 VDAWVIWEPFFAAAEQTLAARILADAGGVVKNRAYYFSSKDYAQKNGDVLSIAVEELNKI 265 Query: 281 DEFAKTRPDDYASELAGILGLPKGVLDVVVRRYNYGTLPITHAILDEQQQIADTFLDLKL 340 D + K + A+EL+ + GLPK V+DV+V R ++GT PI +IL EQQ IADTF +LKL Sbjct: 266 DIWGKANRSELAAELSAVWGLPKPVVDVLVARSSFGTEPINRSILAEQQVIADTFFELKL 325 Query: 341 IPKKINLRETAPPWLA 356 IP++I++R+ AP L Sbjct: 326 IPRQIDVRDAAPAALG 341 >ref|XP_002535127.1| Taurine-binding periplasmic protein precursor, putative [Ricinus communis] gb|EEF27254.1| Taurine-binding periplasmic protein precursor, putative [Ricinus communis] Length = 317 Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats. Identities = 192/290 (66%), Positives = 226/290 (77%), Gaps = 1/290 (0%) Query: 68 HAATRQLRVGYQKGALSIIRAHGTLEQRLASLGATVKWVEFSAGPVQLEALGAGSIDFGD 127 + R LR+G QKG L++++ GTLE+RLA L +V W EFSAGPVQLEAL GSIDFGD Sbjct: 28 QGSPRTLRIGNQKGYLNLLKGRGTLEKRLAPLNVSVSWTEFSAGPVQLEALNVGSIDFGD 87 Query: 128 VGEAPPIFSQAAGTPLVYVGATVPRPYVEAILVKDDS-LQKPAQLKGKRIALNKGSNVHY 186 VGEAPPIF+QAAG PL YV ATV RP EA+LV +S ++ A LKGKRIALNKGSNVHY Sbjct: 88 VGEAPPIFAQAAGAPLAYVAATVTRPQSEAVLVPPNSPIRTVADLKGKRIALNKGSNVHY 147 Query: 187 FLVKLLEKHGLQYGDVTPVWLAPADARAAFERGSVDAWAIWEPYLAAAQQTLKARILADA 246 FLVKLL +HGLQYGDV V+LAPADARAAFER S+DAW IW+P+ AAA++TL A ++ADA Sbjct: 148 FLVKLLRQHGLQYGDVNLVFLAPADARAAFERASIDAWVIWDPFFAAAEKTLGAHVVADA 207 Query: 247 DGVVKNRAYYFSTRDYARDNADLIRIALEELAKVDEFAKTRPDDYASELAGILGLPKGVL 306 GVV NRAYYFS++ YA NAD+IRI +EEL KVDE+ D ASELA + GLPK V+ Sbjct: 208 SGVVGNRAYYFSSQSYAAKNADVIRIVIEELGKVDEWGAHNKDQLASELAQLWGLPKTVV 267 Query: 307 DVVVRRYNYGTLPITHAILDEQQQIADTFLDLKLIPKKINLRETAPPWLA 356 DV V R +GT PIT AIL EQQQIADTFLDL LIPK +++ + APP LA Sbjct: 268 DVAVARQQFGTQPITRAILAEQQQIADTFLDLGLIPKHVDVLKAAPPDLA 317 >ref|YP_001565654.1| aliphatic sulfonate ABC transporter periplasmic ligand-binding protein [Delftia acidovorans SPH-1] gb|ABX37269.1| aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [Delftia acidovorans SPH-1] Length = 336 Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats. Identities = 191/292 (65%), Positives = 232/292 (79%), Gaps = 3/292 (1%) Query: 64 PRLAH--AATRQLRVGYQKGALSIIRAHGTLEQRLASLGATVKWVEFSAGPVQLEALGAG 121 P LA A R LRVG+QKG LSI+++ GTLE+RLA LG +V+W+EF+AGPVQLEAL G Sbjct: 37 PALAQDKAGDRVLRVGHQKGWLSILKSRGTLEKRLAPLGVSVRWIEFNAGPVQLEALNVG 96 Query: 122 SIDFGDVGEAPPIFSQAAGTPLVYVGATVPRPYVEAILVKDDSLQKPAQ-LKGKRIALNK 180 SIDFGDVGEAPPIF+QAAG PLVY GATVPRP +EA++V DS + Q LKGKR+A NK Sbjct: 97 SIDFGDVGEAPPIFAQAAGAPLVYAGATVPRPGLEAVIVPKDSPIRSVQDLKGKRVAYNK 156 Query: 181 GSNVHYFLVKLLEKHGLQYGDVTPVWLAPADARAAFERGSVDAWAIWEPYLAAAQQTLKA 240 GSNV YFLVKLLEKHGL+YGDV V+LAPADARAAFERGSVDAW IW+P+LAAAQ+TL A Sbjct: 157 GSNVQYFLVKLLEKHGLKYGDVQSVFLAPADARAAFERGSVDAWLIWDPFLAAAQKTLDA 216 Query: 241 RILADADGVVKNRAYYFSTRDYARDNADLIRIALEELAKVDEFAKTRPDDYASELAGILG 300 R+LADA GVV NRAYYF++RD+A NAD++RIA+EE+ +D +A A+EL+ ILG Sbjct: 217 RLLADATGVVNNRAYYFTSRDFATRNADVLRIAIEEVDGIDRWASKNQTAAAAELSSILG 276 Query: 301 LPKGVLDVVVRRYNYGTLPITHAILDEQQQIADTFLDLKLIPKKINLRETAP 352 L K + ++ + R +GT +T IL EQQQIADTF +LKLIP+K+NL AP Sbjct: 277 LDKSITELYLSRARFGTSSVTREILAEQQQIADTFFELKLIPRKLNLLHAAP 328 >ref|YP_004487544.1| aliphatic sulfonates family ABC transporter periplasmic ligand-binding protein [Delftia sp. Cs1-4] gb|AEF89189.1| aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein [Delftia sp. Cs1-4] Length = 333 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 188/285 (65%), Positives = 229/285 (80%), Gaps = 1/285 (0%) Query: 69 AATRQLRVGYQKGALSIIRAHGTLEQRLASLGATVKWVEFSAGPVQLEALGAGSIDFGDV 128 A R LRVG+QKG LSI+++ GTLE+RLA LG +V+W+EF+AGPVQLEAL GSIDFGDV Sbjct: 41 AGDRVLRVGHQKGWLSILKSRGTLEKRLAPLGVSVRWIEFNAGPVQLEALNVGSIDFGDV 100 Query: 129 GEAPPIFSQAAGTPLVYVGATVPRPYVEAILVKDDSLQKPAQ-LKGKRIALNKGSNVHYF 187 GEAPPIF+QAAG PLVY GATVPRP +EA++V DS + Q LKGKR+A NKGSNV YF Sbjct: 101 GEAPPIFAQAAGAPLVYAGATVPRPGLEAVIVPKDSPIRSVQDLKGKRVAYNKGSNVQYF 160 Query: 188 LVKLLEKHGLQYGDVTPVWLAPADARAAFERGSVDAWAIWEPYLAAAQQTLKARILADAD 247 LVKLLEKHGL+YGDV V+LAPADARAAFERGSVDAW IW+P+LAAAQ+TL AR+LADA Sbjct: 161 LVKLLEKHGLKYGDVQSVFLAPADARAAFERGSVDAWLIWDPFLAAAQKTLDARLLADAT 220 Query: 248 GVVKNRAYYFSTRDYARDNADLIRIALEELAKVDEFAKTRPDDYASELAGILGLPKGVLD 307 GVV NRAYYF++RD+A NAD++RIA+EE+ +D +A A+EL+ ILGL K + + Sbjct: 221 GVVNNRAYYFTSRDFATRNADVLRIAIEEVDGIDRWASKNQMAAAAELSSILGLDKSITE 280 Query: 308 VVVRRYNYGTLPITHAILDEQQQIADTFLDLKLIPKKINLRETAP 352 + + R +GT +T IL EQQQIADTF +LKLIP+K+NL AP Sbjct: 281 LYLSRARFGTSSVTREILAEQQQIADTFFELKLIPRKLNLLHAAP 325