BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0204.p (570 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002604155.1| IlvB [Desulfobacterium autotrophicum HRM2] >... 659 0.0 ref|YP_002947446.1| thiamine pyrophosphate protein central regio... 634 e-179 ref|YP_003451037.1| acetolactate synthase large subunit [Azospir... 632 e-179 ref|YP_001372613.1| thiamine pyrophosphate protein central regio... 628 e-177 ref|YP_001237399.1| putative acetolactate synthase large subunit... 583 e-164 >ref|YP_002604155.1| IlvB [Desulfobacterium autotrophicum HRM2] gb|ACN15991.1| IlvB [Desulfobacterium autotrophicum HRM2] Length = 656 Score = 659 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 315/568 (55%), Positives = 416/568 (73%), Gaps = 7/568 (1%) Query: 1 MTGADVLVKLLEEYGVEVIFGVPGDTNVAFYKAL--NRSGKVRHVMARDERSALYMADAY 58 M GA LVK+LE+Y VE IFGVPGDT++ FY+AL N+SG +RHVMARDERSA +MADAY Sbjct: 86 MIGAQTLVKMLEKYHVEYIFGVPGDTSIKFYEALYDNQSG-IRHVMARDERSASFMADAY 144 Query: 59 ARYSGKPGVAECPSGAGAMYSLPGMAEANSSSIPLILLTNDIPLKGEGRGMITELDNAKL 118 AR S KPGV ECPSGAG++Y++PG+AEAN+SSIP+I++T+DIPL GEG+ ITELD KL Sbjct: 145 ARLSHKPGVCECPSGAGSLYTVPGIAEANASSIPVIVITSDIPLSGEGKQTITELDTQKL 204 Query: 119 FEPVCKLSFQVKTTAKIPEAVRRAFRTATSGRPGAVHLTFPEDILAHASASTPDEIYAEP 178 +E + K + VK+ KIPE +RRAFR AT+GRPGAVHL+ P++ L +++ ++YA+ Sbjct: 205 YESITKWATVVKSVNKIPEVIRRAFRIATTGRPGAVHLSLPKEALCDEFSNSAKDLYADE 264 Query: 179 ECRRFPAFPMRPDADLVRQLAALLDASRRPVLVAGGGVMHSDGGAALLALAEKIDAAVVT 238 C +PAF R + L + ++R V++ GGG HS G ++ ++AE + A VV+ Sbjct: 265 NCCTYPAFRTRGARTDLEALVDHMAGAKRLVIIVGGGANHSQAGTSIQSMAEWMAAPVVS 324 Query: 239 TITGQGAVPDEHPLALGVIGDNGFHPHAARAVEESDLLVYLGCKMGSVVTIGWTFPSHQQ 298 TI+GQG +PD+HP+ALGVIGDNGFHPHA RAVEE+D+L+Y+GCKMGSV TI W+ PS + Sbjct: 325 TISGQGIMPDDHPMALGVIGDNGFHPHAHRAVEEADVLLYVGCKMGSVSTINWSMPSEKP 384 Query: 299 ERQRVQVDIDPAVLGNTGRNDLNIAGDVRSVLQDLLPLV---TQH-EPRAWNAELNGMRR 354 R+ +Q+D++P +LGN +N ++AGD R V +DL+ L+ T H + W LN R Sbjct: 385 GRKILQIDLNPEMLGNNFQNTWSVAGDARLVAEDLVTLLKGKTAHRQASDWVNSLNQQRL 444 Query: 355 RFWEQAQADLHSDALPLKPQRVVHELNRRLPPRAVMVSDAGTPTPHMTRYLRLPGDGSRL 414 FW+QAQ +D PLKPQR++ ELNR L +++SDAGTPTP++TR+L+L SR Sbjct: 445 DFWKQAQQAFQADTTPLKPQRIIAELNRHLDETTIVISDAGTPTPYITRFLKLAAKNSRF 504 Query: 415 VIPRAFGGLGYAIPAVVGAWLARPDVRPIGLFGDGSFSMSCGELETLTRLQVPAVLLHFN 474 +IPRA+GGLGYAIPAVVGA ARPD R +GLFGDGS MS GELET++RL +P VL+HFN Sbjct: 505 IIPRAYGGLGYAIPAVVGAHFARPDARLVGLFGDGSLGMSAGELETISRLNIPVVLIHFN 564 Query: 475 NGCFGWIKALQKLHNDAQYLSVDFTRLDVARIAQGFGLKGLRAANAEELVAALDEAFASE 534 N FGWIKALQKLH + +Y SVDF + AR+A+GFGLK L E+LV LD AF + Sbjct: 565 NSSFGWIKALQKLHCNKKYFSVDFNANNPARVAEGFGLKALSIETPEQLVQGLDMAFNAR 624 Query: 535 GPVLIDIVSESIVDECPPVYSWIKAMGK 562 GPV +D+ SE +++ PPVYSW+ K Sbjct: 625 GPVFLDVKSEPELEDIPPVYSWMTCQAK 652 >ref|YP_002947446.1| thiamine pyrophosphate protein central region [Variovorax paradoxus S110] gb|ACS22180.1| thiamine pyrophosphate protein central region [Variovorax paradoxus S110] Length = 583 Score = 634 bits (1636), Expect = e-179, Method: Composition-based stats. Identities = 334/578 (57%), Positives = 412/578 (71%), Gaps = 12/578 (2%) Query: 1 MTGADVLVKLLEEYGVEVIFGVPGDTNVAFYKALNRS-GKVRHVMARDERSALYMADAYA 59 M GADVLV++L YGV+V+FGVPGDTNV FY+AL R G + HVMARDERSA YMADAYA Sbjct: 1 MRGADVLVQMLINYGVDVLFGVPGDTNVPFYEALQRRHGDIEHVMARDERSAGYMADAYA 60 Query: 60 RYSGKPGVAECPSGAGAMYSLPGMAEANSSSIPLILLTNDIPLKGEGRGMITELDNAKLF 119 R + +PG+ ECPSGAGAMYSLP +AE+N+SS+P+ILLT D+PL GEGRGMITELD A+LF Sbjct: 61 RLTDRPGIFECPSGAGAMYSLPPLAESNASSVPVILLTIDLPLPGEGRGMITELDCARLF 120 Query: 120 EPVCKLSFQVKTTAKIPEAVRRAFRTATSGRPGAVHLTFPEDILAHASASTPDEIYAEPE 179 EPV K+S QVK+ K+PE VRRAFR A SG PGAVHL PED+L ++AEPE Sbjct: 121 EPVTKMSVQVKSPEKLPEIVRRAFRVACSGTPGAVHLQIPEDMLLAEIDPDAISLHAEPE 180 Query: 180 CRRFPAFPMRPDADLVRQLAALLDASRRPVLVAGGGVMHSDGGAALLALAEKIDAAVVTT 239 CR FPAFPM P V +L ALL + +P+ VAGGGV S G+AL +A K++ VV T Sbjct: 181 CRTFPAFPMAPAPGKVGELFALLRKASKPLFVAGGGVNRSCAGSALTEVAAKLNVPVVNT 240 Query: 240 ITGQGAVPDEHPLALGVIGDNGFHPHAARAVEESDLLVYLGCKMGSVVTIGWTFPSHQQE 299 ITGQGA+PD+H LA+GVIGDNGFHPHA RA+EESDL++++G +MGSVVT+GWTFP Sbjct: 241 ITGQGALPDDHRLAIGVIGDNGFHPHANRALEESDLVIFVGSRMGSVVTVGWTFPKSTLN 300 Query: 300 RQRVQVDIDPAVLGNTGRNDLNIAGDVRSVLQDLLPLV------TQHEPRAWNAELNGMR 353 ++ VQ+DI+P L N N L+IA D + VL+ +L ++H P W LN R Sbjct: 301 KRVVQIDINPERLANNYENLLSIAADAQLVLKQILNEAPVDFDGSKHTP--WIDHLNTYR 358 Query: 354 RRFWEQAQADLHSDALPLKPQRVVHELNRRLPP--RAV-MVSDAGTPTPHMTRYLRLPGD 410 FW+ A+ L +PL+P+RVV E ++L +AV ++SDAGTPTP+MTR+LR+ Sbjct: 359 ANFWDHAEGVLSLSDVPLRPERVVREFGKQLEKYGQAVHILSDAGTPTPYMTRFLRIGDR 418 Query: 411 GSRLVIPRAFGGLGYAIPAVVGAWLARPDVRPIGLFGDGSFSMSCGELETLTRLQVPAVL 470 +R VIPRAFGGLG AIPAVVGAW A RPIG+FGDGSF+M+ GELETL R +VPA+L Sbjct: 419 RTRFVIPRAFGGLGSAIPAVVGAWYADKTRRPIGMFGDGSFNMAVGELETLVRKKVPALL 478 Query: 471 LHFNNGCFGWIKALQKLHNDAQYLSVDFTRLDVARIAQGFGLKGLRAANAEELVAALDEA 530 + FNNGCFGWIK L +L + VDF IA+ F +K AA ELV ALDEA Sbjct: 479 MLFNNGCFGWIKGLHRLKGHDECFGVDFLPPRGQAIAEAFDIKAWTAATPGELVQALDEA 538 Query: 531 FASEGPVLIDIVSESIVDECPPVYSWIKAMGKDPLAVG 568 FA +GP LIDI ES+ D PPVYSW+ DPLA+ Sbjct: 539 FAYDGPCLIDIHIESLADRVPPVYSWLAKKKLDPLALA 576 >ref|YP_003451037.1| acetolactate synthase large subunit [Azospirillum sp. B510] dbj|BAI74493.1| acetolactate synthase large subunit [Azospirillum sp. B510] Length = 584 Score = 632 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 327/576 (56%), Positives = 406/576 (70%), Gaps = 9/576 (1%) Query: 1 MTGADVLVKLLEEYGVEVIFGVPGDTNVAFYKALN-RSGKVRHVMARDERSALYMADAYA 59 M GAD+LV++L YGV+V+FGVPGDTNV FY+AL R G++RHVMARDERSA YMADAY Sbjct: 1 MRGADILVEMLIAYGVDVVFGVPGDTNVPFYEALQEREGRIRHVMARDERSAGYMADAYG 60 Query: 60 RYSGKPGVAECPSGAGAMYSLPGMAEANSSSIPLILLTNDIPLKGEGRGMITELDNAKLF 119 R++ KP V ECPSGAGAMYSLP +AE+N+SS+P+ILLT DIPL GEGRG++TELD A+LF Sbjct: 61 RFTSKPAVFECPSGAGAMYSLPPVAESNASSVPVILLTIDIPLPGEGRGVLTELDCARLF 120 Query: 120 EPVCKLSFQVKTTAKIPEAVRRAFRTATSGRPGAVHLTFPEDILAHASASTPDEIYAEPE 179 EP+ K+S QVK+ K+PE +RRAFR A SG+PGAVHL PED+L ++ E E Sbjct: 121 EPITKMSVQVKSAEKLPEILRRAFRVACSGKPGAVHLQIPEDMLRAEVDPARVSLHVEEE 180 Query: 180 CRRFPAFPMRPDADLVRQLAALLDASRRPVLVAGGGVMHSDGGAALLALAEKIDAAVVTT 239 C FPAFP P D + +L ALL AS RP++V+GGGV S G + ALAE+++ V TT Sbjct: 181 CASFPAFPTLPTPDTLHRLMALLSASERPLIVSGGGVNRSCAGPEVTALAERLNIPVCTT 240 Query: 240 ITGQGAVPDEHPLALGVIGDNGFHPHAARAVEESDLLVYLGCKMGSVVTIGWTFPSHQQE 299 +TGQG +PD+H LA+GVIGDNGFHPHA A+E +D ++++G KMGSVVTIGWTFP Sbjct: 241 MTGQGTMPDDHRLAVGVIGDNGFHPHANWALEHADFVLFVGSKMGSVVTIGWTFPKITLN 300 Query: 300 RQRVQVDIDPAVLGNTGRNDLNIAGDVRSVLQDLLPLVTQHEPRA----WNAELNGMRRR 355 ++ Q+DIDP ++ N N L++ GD + L L+ L R W ELNG+R Sbjct: 301 KRVAQIDIDPEIMANNYENVLSVPGDAKLTLAQLIDLAPADHDRGKTQPWVDELNGLRAE 360 Query: 356 FWEQAQADLHSDALPLKPQRVVHELNRRLPPR---AVMVSDAGTPTPHMTRYLRLPGDGS 412 FW A+ L+SD+LPL+P+RVV N L A + SDAGTPTP+MTR+L+L + Sbjct: 361 FWRNAEPLLNSDSLPLRPERVVRCFNEALEAHGKPAHIYSDAGTPTPYMTRFLKLKDRRT 420 Query: 413 RLVIPRAFGGLGYAIPAVVGAWLARPDVRPIGLFGDGSFSMSCGELETLTRLQVPAVLLH 472 R IPRAFGGLG A+PA VGAW A + RPIG+FGDGSF M+ GELETL RLQVPA+LL Sbjct: 421 RFAIPRAFGGLGSALPATVGAWFADKERRPIGMFGDGSFGMAVGELETLVRLQVPAILLL 480 Query: 473 FNNGCFGWIKALQKLHNDAQYLSVDFTRLDVARIAQGFGLKGLRAANAEELVAALDEAFA 532 FNNG FGWIK L +L Q SVDF IA+ FG++ A + EL AL EAFA Sbjct: 481 FNNGTFGWIKGLHRLRGHNQCFSVDFMPPQGQAIAEAFGVRAWTARTSVELDKALAEAFA 540 Query: 533 SE-GPVLIDIVSESIVDECPPVYSWIKAMGKDPLAV 567 + GP LIDI ESI D PPVYSW+ G+DPLAV Sbjct: 541 YDSGPCLIDIHVESIADRVPPVYSWLSKRGRDPLAV 576 >ref|YP_001372613.1| thiamine pyrophosphate protein central region [Ochrobactrum anthropi ATCC 49188] gb|ABS16784.1| thiamine pyrophosphate protein central region [Ochrobactrum anthropi ATCC 49188] Length = 583 Score = 628 bits (1619), Expect = e-177, Method: Composition-based stats. Identities = 323/573 (56%), Positives = 399/573 (69%), Gaps = 8/573 (1%) Query: 1 MTGADVLVKLLEEYGVEVIFGVPGDTNVAFYKALN-RSGKVRHVMARDERSALYMADAYA 59 M GAD+LV++L YGVE IFGVPGDTNV FY+AL R G++RHVMARDERSA YMADAY Sbjct: 1 MRGADILVQMLIGYGVETIFGVPGDTNVPFYEALQQREGEIRHVMARDERSAGYMADAYG 60 Query: 60 RYSGKPGVAECPSGAGAMYSLPGMAEANSSSIPLILLTNDIPLKGEGRGMITELDNAKLF 119 R+S KPGV ECPSGAGAMYSLP +AE+N SSIP+ILLT DIPL GEGRG++TELD AKLF Sbjct: 61 RFSNKPGVFECPSGAGAMYSLPPVAESNGSSIPVILLTIDIPLPGEGRGVLTELDCAKLF 120 Query: 120 EPVCKLSFQVKTTAKIPEAVRRAFRTATSGRPGAVHLTFPEDILAHASASTPDEIYAEPE 179 EPV KLS QVK+ K+PE +RRAFR A SG+PGAVHL PED+L ++ E E Sbjct: 121 EPVTKLSVQVKSAEKLPEIIRRAFRVACSGKPGAVHLQIPEDMLLAEVDPARISLHIEEE 180 Query: 180 CRRFPAFPMRPDADLVRQLAALLDASRRPVLVAGGGVMHSDGGAALLALAEKIDAAVVTT 239 C+ FPAFP P + +L L+ + RP++VAGGGV + G + LAEK + + TT Sbjct: 181 CKTFPAFPTLPPKQKLHELLELIAKAERPLIVAGGGVNRARAGDQISRLAEKYNIPMCTT 240 Query: 240 ITGQGAVPDEHPLALGVIGDNGFHPHAARAVEESDLLVYLGCKMGSVVTIGWTFPSHQQE 299 +TGQGA+ D+H LA+GVIGDNG+HPHA A+E SD +++G ++GSVVTIGWTFP Sbjct: 241 MTGQGAIDDDHRLAIGVIGDNGYHPHANWALEHSDFTLFVGSRIGSVVTIGWTFPKITLN 300 Query: 300 RQRVQVDIDPAVLGNTGRNDLNIAGDVRSVLQDLLPLVTQHEPR---AWNAELNGMRRRF 356 R+ Q+DI P ++ N N L+I GD VL++LL + EP+ W ELN RR F Sbjct: 301 RRLAQIDISPEIMANNYENLLSIQGDALLVLEELLQIELTIEPKKHDGWIEELNARRRIF 360 Query: 357 WEQAQADLHSDALPLKPQRVVHELNRRLPPR---AVMVSDAGTPTPHMTRYLRLPGDGSR 413 WE A+ L+ + +PL+P+RVV N L A++ SDAGTPTP+MTR+L++ +R Sbjct: 361 WEHAEEALNDERVPLRPERVVRSFNDALSQSGQPALIYSDAGTPTPYMTRFLKINDQETR 420 Query: 414 LVIPRAFGGLGYAIPAVVGAWLARPDVRPIGLFGDGSFSMSCGELETLTRLQVPAVLLHF 473 IPRAFGGLG A+PA VGAW A PD RPIGLFGDGSF M+ GELETL RLQVPA+L+ F Sbjct: 421 FAIPRAFGGLGSALPATVGAWRADPDKRPIGLFGDGSFGMTVGELETLVRLQVPAILILF 480 Query: 474 NNGCFGWIKALQKLHNDAQYLSVDFTRLDVARIAQGFGLKGLRAANAEELVAALDEAFA- 532 NN FGWIK L +L Q VDF IA+ +GLK A A+E+ AL EAFA Sbjct: 481 NNATFGWIKGLHRLKGHNQCFGVDFLAPKGQAIAEAYGLKAWTAKTADEVDIALAEAFAW 540 Query: 533 SEGPVLIDIVSESIVDECPPVYSWIKAMGKDPL 565 +GP +DI ESI D PPVYSW+ G+DPL Sbjct: 541 KDGPCFVDIHVESIADRVPPVYSWLLKRGEDPL 573 >ref|YP_001237399.1| putative acetolactate synthase large subunit [Bradyrhizobium sp. BTAi1] gb|ABQ33493.1| putative acetolactate synthase large subunit [Bradyrhizobium sp. BTAi1] Length = 595 Score = 583 bits (1504), Expect = e-164, Method: Composition-based stats. Identities = 317/589 (53%), Positives = 400/589 (67%), Gaps = 22/589 (3%) Query: 1 MTGADVLVKLLEEYGVEVIFGVPGDTNVAFYKALNRS-GKVRHVMARDERSALYMADAYA 59 M GA LV +L YGV+VIFGVPGDTNVA Y+AL + G RH++ RDERSA++MAD YA Sbjct: 3 MNGATALVSMLSGYGVDVIFGVPGDTNVALYEALRMTKGAPRHILCRDERSAVFMADCYA 62 Query: 60 RYSGKPGVAECPSGAGAMYSLPGMAEANSSSIPLILLTNDIPLKGEGRGMITELDNAKLF 119 R SGKPGVAE PSGAGA+Y LPG+AEAN SS+PLILL NDIP G GRG +TEL LF Sbjct: 63 RLSGKPGVAEVPSGAGALYGLPGVAEANKSSVPLILLVNDIPQPGVGRGTLTELPVQDLF 122 Query: 120 EPVCKLSFQVKTTAKIPEAVRRAFRTATSGRPGAVHLTFPEDILAHASASTPDEIYAEPE 179 +P+ K + + K+PE VRRAFR AT GRPGAV L PEDIL S ++ EP+ Sbjct: 123 KPISKRAETLAHVRKLPEVVRRAFREATGGRPGAVVLALPEDILYQDLPSEGVSLHVEPQ 182 Query: 180 CRRFPAFPMRP-DADLVRQLAALLDASRRPVLVAGGGVMHSDGGAALLALAEKIDAAVVT 238 CR+ P++ RP DADL L A+L A+ RP++VAGGG S A+ A AE++ VVT Sbjct: 183 CRQAPSYRSRPADADLDSALNAIL-AAERPLIVAGGGANRSAAAEAITAFAERLGIPVVT 241 Query: 239 TITGQGAVPDEHPLALGVIGDNGFHPHAARAVEESDLLVYLGCKMGSVVTIGWTFPSHQQ 298 TITGQG + D+H L +G+IGDNGFHPHA A+ +DL++Y+GC+MGSV T+ W +P Sbjct: 242 TITGQGVIRDDHKLGIGIIGDNGFHPHAVWALGRADLVIYVGCRMGSVATMNWQWPVPNG 301 Query: 299 ERQRVQVDIDPAVLGNTGRNDLNIAGDVRSVLQDLL---PLVTQHEPRAWNAELNGMRRR 355 E + VQVD++P V+GNT D + GD R+V++ L+ P AW E+N R Sbjct: 302 ETRIVQVDLEPEVIGNTYAIDFPLVGDARAVVEALIAKAPADHASVTAAWVDEINSRRAD 361 Query: 356 FWEQAQADLHSDALPLKPQRVVHELNRRLPPRAVMVSDAGTPTPHMTRYLRLPGDGSRLV 415 FW+ L SD +PL+P+RV+ LNR LP +VSDAGTPTP+ TR+LRL S+LV Sbjct: 362 FWDVMAPHLQSDEVPLRPERVIETLNRCLPMPCNVVSDAGTPTPYATRFLRLRDPQSKLV 421 Query: 416 IPRAFGGLGYAIPAVVGAWLARPDVRPIGLFGDGSFSMSCGELETLTRLQVPAVLLHFNN 475 IPR +GGLGYAIPAV+GA+ A P +RP+GLFGDGS MS GELETL+RLQVPAVL+HFNN Sbjct: 422 IPRFYGGLGYAIPAVIGAYFAAPHLRPVGLFGDGSLGMSAGELETLSRLQVPAVLIHFNN 481 Query: 476 GCFGWIKALQKL-----------HNDA-----QYLSVDFTRLDVARIAQGFGLKGLRAAN 519 CFGWIKALQ++ H+ A SVDF + D++R+A +G++ R Sbjct: 482 ACFGWIKALQRVVDRDRARKASEHSPAVPVNDPTFSVDFGKYDMSRLASVYGIRSFRVET 541 Query: 520 AEELVAALDEAFASEGPVLIDIVSESIVDECPPVYSWIKAMGKDPLAVG 568 +L AAL EAF PV ID+ ESI D PPV+SW+K +G DP AVG Sbjct: 542 PAQLEAALREAFELNEPVFIDVAVESIADRLPPVFSWLKKVGADPAAVG 590