BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0201.p (214 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773724.1| MotA/TolQ/ExbB proton channel family protein... 358 4e-97 ref|YP_004754730.1| MotA/TolQ/ExbB proton channel family protein... 325 3e-87 ref|ZP_08273886.1| MotA/TolQ/ExbB proton channel family protein ... 200 1e-49 ref|YP_258124.1| TonB system transport protein ExbB5 [Pseudomona... 200 1e-49 ref|ZP_07003687.1| MotA/TolQ/ExbB proton channel family protein ... 182 2e-44 >ref|YP_003773724.1| MotA/TolQ/ExbB proton channel family protein [Herbaspirillum seropedicae SmR1] gb|ADJ61816.1| MotA/TolQ/ExbB proton channel family protein [Herbaspirillum seropedicae SmR1] Length = 208 Score = 358 bits (918), Expect = 4e-97, Method: Composition-based stats. Identities = 201/214 (93%), Positives = 203/214 (94%), Gaps = 6/214 (2%) Query: 1 MNMQLLHELAFYLMYACAALAIFVIVERGLFFGYTMRQATGLERAMTHAVQHLQELPAEL 60 MNMQLLHELAFYLMYACAALAIFVIVERGLFFGYTMRQATGLERAMTHAVQHL+ELPA L Sbjct: 1 MNMQLLHELAFYLMYACAALAIFVIVERGLFFGYTMRQATGLERAMTHAVQHLKELPAAL 60 Query: 61 TTRPSLPLALVSDILAEKHHLHTEKDLEDFSESVYIAKRGEVQQRLWILDTIVTAAPLLG 120 T RPSLPLALVSDILAEKHHL TEKDLEDFSESVYIAKRGEVQQRLWILDTIVTAAPLLG Sbjct: 61 TARPSLPLALVSDILAEKHHLTTEKDLEDFSESVYIAKRGEVQQRLWILDTIVTAAPLLG 120 Query: 121 LLGTILGIIDTFKALAVQGVSDPGQVSQGIGTALYATALGIGIAVVGMFFFNLFQERIER 180 LLGTILGIIDTFKALAV GVSDPGQVSQGIGTALYATALGIGIAVVGMFFFNLFQERIER Sbjct: 121 LLGTILGIIDTFKALAVSGVSDPGQVSQGIGTALYATALGIGIAVVGMFFFNLFQERIER 180 Query: 181 INDHLKVLMLRACVGRLNPQPQHSPQPQGKLHIA 214 INDHLKVLMLRACVGR+N PQPQ KLHIA Sbjct: 181 INDHLKVLMLRACVGRVN------PQPQSKLHIA 208 >ref|YP_004754730.1| MotA/TolQ/ExbB proton channel family protein [Collimonas fungivorans Ter331] gb|AEK63907.1| MotA/TolQ/ExbB proton channel family protein [Collimonas fungivorans Ter331] Length = 222 Score = 325 bits (833), Expect = 3e-87, Method: Composition-based stats. Identities = 183/216 (84%), Positives = 193/216 (89%), Gaps = 2/216 (0%) Query: 1 MNMQLLHELAFYLMYACAALAIFVIVERGLFFGYTMRQATGLERAMTHAVQHLQELPAEL 60 MNMQL HELAFYLMYACAALAIFVIVERGLFF YT+RQA GLE+AMTHAVQH+QELPA L Sbjct: 7 MNMQLFHELAFYLMYACAALAIFVIVERGLFFNYTLRQAIGLEKAMTHAVQHVQELPAAL 66 Query: 61 TTRPSLPLALVSDILAEKHHLHTEKDLEDFSESVYIAKRGEVQQRLWILDTIVTAAPLLG 120 T+R SLPL LVSDILAEKH L +EKDL+DFSESVYIA RGEVQ RLWILDTIVTAAPLLG Sbjct: 67 TSRASLPLTLVSDILAEKHQLTSEKDLQDFSESVYIANRGEVQHRLWILDTIVTAAPLLG 126 Query: 121 LLGTILGIIDTFKALAVQGVSDPGQVSQGIGTALYATALGIGIAVVGMFFFNLFQERIER 180 LLGTILGIIDTFKALAV GVSDPGQVSQGIGTALYATALGIGIAVVGMFFFN+FQERIER Sbjct: 127 LLGTILGIIDTFKALAVSGVSDPGQVSQGIGTALYATALGIGIAVVGMFFFNMFQERIER 186 Query: 181 INDHLKVLMLRACVGRLNPQPQHSP--QPQGKLHIA 214 INDHLKVLMLRACVGR+ + GKLH+A Sbjct: 187 INDHLKVLMLRACVGRVAGHDTKAAALAEAGKLHLA 222 >ref|ZP_08273886.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32651.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae bacterium IMCC9480] Length = 146 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 114/127 (89%), Positives = 118/127 (92%) Query: 71 VSDILAEKHHLHTEKDLEDFSESVYIAKRGEVQQRLWILDTIVTAAPLLGLLGTILGIID 130 +SDIL+ KH L T+KDLEDFSESVYIA RG VQ RLWILDTIVTAAPLLGLLGTILGIID Sbjct: 1 MSDILSVKHELATDKDLEDFSESVYIANRGAVQHRLWILDTIVTAAPLLGLLGTILGIID 60 Query: 131 TFKALAVQGVSDPGQVSQGIGTALYATALGIGIAVVGMFFFNLFQERIERINDHLKVLML 190 TFKALAV GVSDPG VSQGIGTALYATALGIGIAVVGMFFFNL+QERIERINDHLKVLML Sbjct: 61 TFKALAVSGVSDPGAVSQGIGTALYATALGIGIAVVGMFFFNLYQERIERINDHLKVLML 120 Query: 191 RACVGRL 197 RACVGR Sbjct: 121 RACVGRF 127 >ref|YP_258124.1| TonB system transport protein ExbB5 [Pseudomonas fluorescens Pf-5] gb|AAY90280.1| TonB system transport protein ExbB5 [Pseudomonas fluorescens Pf-5] Length = 214 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 121/208 (58%), Positives = 154/208 (74%), Gaps = 3/208 (1%) Query: 1 MNMQLLHELAFYLMYACAALAIFVIVERGLFFGYTMRQATGLERAMTHAVQHLQELPAEL 60 M+M LLH++ FY MY AA+A F+ VERG++F +++RQA LE + + + +LPA L Sbjct: 1 MDMNLLHDITFYTMYGAAAIAAFIAVERGIYFSFSLRQAKKLETVLNPKMHSVDDLPAPL 60 Query: 61 TTRPSLPLALVSDILAEKHHLHTEKDLEDFSESVYIAKRGEVQQRLWILDTIVTAAPLLG 120 R SLPL +V+++ A K L + KDLED SES+YIA R ++ LW+L+T+VTAAPLLG Sbjct: 61 RERNSLPLEMVAELFAHKQGLASHKDLEDLSESIYIATRSKLMHGLWLLETVVTAAPLLG 120 Query: 121 LLGTILGIIDTFKALAVQGVSDPGQVSQGIGTALYATALGIGIAVVGMFFFNLFQERIER 180 LLGTILGIIDTFKALA GVSDPG+VS+GIGTALYATALGI IA+ M F N FQ+R+ER Sbjct: 121 LLGTILGIIDTFKALAETGVSDPGEVSKGIGTALYATALGIAIALGSMIFHNHFQDRVER 180 Query: 181 INDHLKVLMLRACVGRLNPQPQHSPQPQ 208 I DHLK+L+LRA +G P P PQ Sbjct: 181 ITDHLKILLLRAGMGTALKAP---PAPQ 205 >ref|ZP_07003687.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gb|EFI00891.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 216 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 110/208 (52%), Positives = 152/208 (73%), Gaps = 1/208 (0%) Query: 1 MNMQLLHELAFYLMYACAALAIFVIVERGLFFGYTMRQATGLERAMTHAVQHLQELPAEL 60 M+M LH++ FY+MYA A+AIFV +ERG++F Y RQA L+ A++ +V ++LP L Sbjct: 1 MDMNQLHDITFYVMYAAIAVAIFVAIERGIYFAYVRRQARALQTALSASVNSEKDLPEAL 60 Query: 61 TTRPSLPLALVSDILAEKHHLHTEKDLEDFSESVYIAKRGEVQQRLWILDTIVTAAPLLG 120 T R LPL++V +LA+K+ + +DL+D E+ Y++ R + + LW+++TI TAAPLLG Sbjct: 61 TRRAGLPLSMVLPVLAQKNAQGSRRDLDDVIETQYLSTRAPLARSLWLIETITTAAPLLG 120 Query: 121 LLGTILGIIDTFKALAVQGVSDPGQVSQGIGTALYATALGIGIAVVGMFFFNLFQERIER 180 LLGTILGIIDTFKALA GVSDPGQ+S GIGTAL+AT LGI IA+ + F N FQ+ +ER Sbjct: 121 LLGTILGIIDTFKALASAGVSDPGQISAGIGTALFATGLGIAIALFCVVFHNYFQDSLER 180 Query: 181 INDHLKVLMLRACVG-RLNPQPQHSPQP 207 IND LK+L++RA G R+ + +HS P Sbjct: 181 INDQLKILLIRASSGARVQDETEHSAAP 208