BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0196.p (199 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773728.1| hypothetical protein Hsero_0294 [Herbaspiril... 301 4e-80 ref|YP_004754726.1| hypothetical protein CFU_4081 [Collimonas fu... 210 9e-53 ref|YP_003603923.1| hypothetical protein BC1002_0305 [Burkholder... 133 1e-29 ref|YP_001580991.1| hypothetical protein Bmul_2810 [Burkholderia... 124 6e-27 ref|YP_587472.1| hypothetical protein Rmet_5344 [Cupriavidus met... 124 8e-27 >ref|YP_003773728.1| hypothetical protein Hsero_0294 [Herbaspirillum seropedicae SmR1] gb|ADJ61820.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 192 Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats. Identities = 163/175 (93%), Positives = 166/175 (94%) Query: 8 MQASPDHRSVLRTHLAAIAGTALCYFLFYSINEWLFRRTQFTEGIAWIYLPAGVRLICTL 67 MQAS + RS LRTHLAA AGTALCYFLFYSINEWLFRRTQFTEGIAWIYLPAGVRLICTL Sbjct: 1 MQASSEFRSALRTHLAAAAGTALCYFLFYSINEWLFRRTQFTEGIAWIYLPAGVRLICTL 60 Query: 68 LFAEAGCVGLLVGSLATAATYQLFPHDLIAAAGYCLISAGAPYLAYRLTLSGMDLGRNLG 127 LFAEAGCVGLL+GSLATAATY LFPHD IA AGYCLISAGAPYLAYRLTLSG+DLGRNL Sbjct: 61 LFAEAGCVGLLIGSLATAATYHLFPHDPIAVAGYCLISAGAPYLAYRLTLSGLDLGRNLS 120 Query: 128 NLNTTRLMACILLYALSNPLFQLIWFVMRGVYPDFWSGLIVMSIGDLSGSLIVVY 182 NLNTTRLMACILLYALSNPL QLIWFVMRGVYPDFWSGLIVMSIGDLSGSLIVVY Sbjct: 121 NLNTTRLMACILLYALSNPLLQLIWFVMRGVYPDFWSGLIVMSIGDLSGSLIVVY 175 >ref|YP_004754726.1| hypothetical protein CFU_4081 [Collimonas fungivorans Ter331] gb|AEK63903.1| hypothetical protein CFU_4081 [Collimonas fungivorans Ter331] Length = 189 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 118/191 (61%), Positives = 142/191 (74%), Gaps = 3/191 (1%) Query: 8 MQASPDHRSVLRTHLAAIAGTALCYFLFYSINEWLFRRTQFTEGIAWIYLPAGVRLICTL 67 M +P + LR +L + TA+ Y L Y N+WLF+ +F +GIAWIYLPAG+RLICTL Sbjct: 1 MSTTPSPAAKLRLNLLTVGSTAIVYMLVYMTNDWLFKHIEFAQGIAWIYLPAGIRLICTL 60 Query: 68 LFAEAGCVGLLVGSLATAATYQLFPHDLIAAAGYCLISAGAPYLAYRLTLSGMDLGRNLG 127 LFAEAG +G+L+GSL ++ Y LFP D + GY +ISA APYLAYR TL GM L +L Sbjct: 61 LFAEAGVLGILIGSLLASSVYALFPGDPVTTVGYSIISALAPYLAYRFTLQGMRLQPSLS 120 Query: 128 NLNTTRLMACILLYALSNPLFQLIWFVMRGVYPDFWSGLIVMSIGDLSGSLIVVYLCKLL 187 NL TTRL+ACILLY L+NPL QL+WFV+RGV FWSGLIVMSIGDL+GSLIVVY K+L Sbjct: 121 NLTTTRLLACILLYGLTNPLLQLLWFVLRGVSYHFWSGLIVMSIGDLTGSLIVVYAIKML 180 Query: 188 LSMLPRMPLPR 198 LS L PLPR Sbjct: 181 LSFL---PLPR 188 >ref|YP_003603923.1| hypothetical protein BC1002_0305 [Burkholderia sp. CCGE1002] gb|ADG14412.1| conserved hypothetical protein [Burkholderia sp. CCGE1002] Length = 209 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 74/180 (41%), Positives = 109/180 (60%), Gaps = 1/180 (0%) Query: 16 SVLRTHLAAIAGTALCYFLFYSINEWLFRRTQFTEGIAWIYLPAGVRLICTLLFAEAGCV 75 S LR H +IAGT + + + IN+ +F T F G+ WI+LP+GVRL+ TLL G + Sbjct: 2 SSLRLHFWSIAGTVVAFLVSLWINQEVFAHTSFVRGVNWIFLPSGVRLLSTLLLGFDGAI 61 Query: 76 GLLVGSLATAATYQLFPHDLIAAAGYCLISAGAPYLAYRLTLSGMDLGRNLGNLNTTRLM 135 GLL+ L T Y FPHD + A L+ + APYL YR L DL +L NL RL+ Sbjct: 62 GLLLAGLVTDFLY-WFPHDPVRATAGALLGSLAPYLVYRFALEYYDLRASLMNLTPKRLL 120 Query: 136 ACILLYALSNPLFQLIWFVMRGVYPDFWSGLIVMSIGDLSGSLIVVYLCKLLLSMLPRMP 195 + Y+++NPLF +WF + G +++ M +GDL+G+LI++Y+ K LL++LP+ P Sbjct: 121 VLAVAYSVANPLFHHLWFALTGTTKNWFESFFTMFVGDLTGALIMLYVMKGLLALLPKQP 180 >ref|YP_001580991.1| hypothetical protein Bmul_2810 [Burkholderia multivorans ATCC 17616] ref|YP_001944934.1| hypothetical protein BMULJ_00430 [Burkholderia multivorans ATCC 17616] gb|ABX16494.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] dbj|BAG42398.1| hypothetical protein BMULJ_00430 [Burkholderia multivorans ATCC 17616] Length = 200 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 73/181 (40%), Positives = 104/181 (57%), Gaps = 2/181 (1%) Query: 19 RTHLAAIAGTALCYFLFYSINEWLFRRTQFTEGIAWIYLPAGVRLICTLLFAEAGCVGLL 78 R LA++ GTAL + + +N+ +F ++F G+ WIYLP+GVRL+ TLL G +GLL Sbjct: 5 RLRLASVIGTALVFVVSLWVNQEVFTHSEFVRGVNWIYLPSGVRLLATLLLGSDGAIGLL 64 Query: 79 VGSLATAATYQLFPHDLIAAAGYCLISAGAPYLAYRLTLSGMDLGRNLGNLNTTRLMACI 138 V S Y FP+D I + +I+ APY YRL L +L NL RL+ Sbjct: 65 VASWLVDFLY-FFPNDPIRSIAGGIIATVAPYATYRLAREHYGLHASLTNLTPKRLLILA 123 Query: 139 LLYALSNPLFQLIWFVMRGVYPDFWSGLIVMSIGDLSGSLIVVYLCKLLLSMLPRMPLPR 198 L ++++NPL IW +RG + M +GDLSG+LI++Y K+LLS+LP P R Sbjct: 124 LAFSVANPLLTNIWLALRGQTTNIGERFFAMFVGDLSGTLIILYTIKILLSVLPG-PAER 182 Query: 199 R 199 R Sbjct: 183 R 183 >ref|YP_587472.1| hypothetical protein Rmet_5344 [Cupriavidus metallidurans CH34] gb|ABF12203.1| hypothetical protein Rmet_5344 [Cupriavidus metallidurans CH34] Length = 197 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 75/178 (42%), Positives = 102/178 (57%), Gaps = 1/178 (0%) Query: 18 LRTHLAAIAGTALCYFLFYSINEWLFRRTQFTEGIAWIYLPAGVRLICTLLFAEAGCVGL 77 LR A + T + + L + N+WLF + + GI WIYLPAGVRL+ TLLF AG +GL Sbjct: 4 LRLQFAMVLATIVMFALTLAANDWLFPQLELIPGINWIYLPAGVRLVATLLFGGAGALGL 63 Query: 78 LVGSLATAATYQLFPHDLIAAAGYCLISAGAPYLAYRLTLSGMDLGRNLGNLNTTRLMAC 137 L+ S Y LFP D A +++ APYL Y+ L +L NL RL+AC Sbjct: 64 LIVSWLVCFLY-LFPDDFSRAFMGGILATVAPYLVYKSAQHWFGLRASLANLTPKRLLAC 122 Query: 138 ILLYALSNPLFQLIWFVMRGVYPDFWSGLIVMSIGDLSGSLIVVYLCKLLLSMLPRMP 195 I+ Y++++PL IWF + VM IGDLSG+LIV+Y K LL+++PR P Sbjct: 123 IVAYSVASPLLHHIWFYLHDGADHVVQSFFVMFIGDLSGTLIVIYTIKGLLALMPRRP 180