BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0193.p (248 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773732.1| short-chain alcohol dehydrogenase [Herbaspir... 426 e-117 ref|YP_001190057.1| short-chain dehydrogenase/reductase SDR [Pse... 302 2e-80 ref|YP_002942727.1| short-chain dehydrogenase/reductase SDR [Var... 302 3e-80 ref|YP_004427088.1| putative oxidoreductase [Alteromonas macleod... 299 3e-79 ref|ZP_01893948.1| Putative oxidoreductase [Marinobacter algicol... 297 8e-79 >ref|YP_003773732.1| short-chain alcohol dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ61824.1| short-chain alcohol dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 248 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 242/248 (97%), Positives = 246/248 (99%) Query: 1 MSNNIKDKVVVITGASSGLGETTARHLASLGARLVLGARRTDRLEKLVADITAAGGQAIA 60 MSNNIKDKVVVITGASSGLGETTARHLASLGA+LVLGARRT+RLEKLVADITAAGGQAIA Sbjct: 1 MSNNIKDKVVVITGASSGLGETTARHLASLGAKLVLGARRTERLEKLVADITAAGGQAIA 60 Query: 61 VTTDVARRDDVEALVAKGEQHFGRIDVLVNNAGIMPLAPMAKLKVEEWDRMIDVNVKGVL 120 VTTDVARRDDVEALVAKGEQHFGRIDVLVNNAGIMPLAPMAKLKVEEWDRMIDVNVKGVL Sbjct: 61 VTTDVARRDDVEALVAKGEQHFGRIDVLVNNAGIMPLAPMAKLKVEEWDRMIDVNVKGVL 120 Query: 121 YGVAAALPRFAAQGSGHIINVSSVAGIKVFAGMGTVYSATKFAVRALTEGLRAEAPDGVR 180 YGVAAALPRFAAQ SGHIINVSSVAGIKVFAGMGTVYSATKFAVRALTEGLR EAPDGVR Sbjct: 121 YGVAAALPRFAAQSSGHIINVSSVAGIKVFAGMGTVYSATKFAVRALTEGLRTEAPDGVR 180 Query: 181 TTIISPGAVDSELKTHSSDQETSEALLAWYEANQIPADSVARAIAYAIEQPANVDISEVV 240 TTIISPGAVDSELKTHSSD+ETSEALLAWYEANQIP+DSVARAIAYAIEQPANVDISEVV Sbjct: 181 TTIISPGAVDSELKTHSSDKETSEALLAWYEANQIPSDSVARAIAYAIEQPANVDISEVV 240 Query: 241 LRPVAQEF 248 LRPVAQEF Sbjct: 241 LRPVAQEF 248 >ref|YP_001190057.1| short-chain dehydrogenase/reductase SDR [Pseudomonas mendocina ymp] gb|ABP87325.1| short-chain dehydrogenase/reductase SDR [Pseudomonas mendocina ymp] Length = 264 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 162/248 (65%), Positives = 204/248 (82%), Gaps = 1/248 (0%) Query: 1 MSNNIKDKVVVITGASSGLGETTARHLASLGARLVLGARRTDRLEKLVADITAAGGQAIA 60 MSNNI KVVVITGASSGLGE TARHL+ LGA++VL ARR +RLE+LV+++ AAGG+A+A Sbjct: 18 MSNNISGKVVVITGASSGLGEATARHLSKLGAKVVLAARRKERLEQLVSELVAAGGEAVA 77 Query: 61 VTTDVARRDDVEALVAKGEQHFGRIDVLVNNAGIMPLAPMAKLKVEEWDRMIDVNVKGVL 120 TTDV R D+V+AL+ FGR+DVL+NNAG+M +APM+ ++VEEW+RMID+N+KGVL Sbjct: 78 YTTDVTRADEVKALIQGALDSFGRVDVLINNAGLMAIAPMSDVRVEEWERMIDINIKGVL 137 Query: 121 YGVAAALPRFAAQGSGHIINVSSVAGIKVFAGMGTVYSATKFAVRALTEGLRAEAPDGVR 180 YG+AAALP F Q +GH IN++SVAGIKVF+ GTVYS TKFAVRA++EGLR E +R Sbjct: 138 YGIAAALPVFQQQNAGHFINIASVAGIKVFSPGGTVYSGTKFAVRAISEGLRHEVGGSIR 197 Query: 181 TTIISPGAVDSELKTHSSDQETSEALLAWYEANQIPADSVARAIAYAIEQPANVDISEVV 240 TT I PGAVDSELK SS Q++ + ++ +Y+ IPA+SVARAIAYAIEQPA+VDI+E+V Sbjct: 198 TTTIEPGAVDSELKFGSSHQQSRDFVVDFYK-QAIPAESVARAIAYAIEQPADVDINEIV 256 Query: 241 LRPVAQEF 248 LRP QEF Sbjct: 257 LRPTTQEF 264 >ref|YP_002942727.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110] gb|ACS17461.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110] Length = 252 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 169/249 (67%), Positives = 213/249 (85%), Gaps = 1/249 (0%) Query: 1 MSNNIKDKVVVITGASSGLGETTARHLASLGARLVLGARRTDRLEKLVADITAAGGQAIA 60 + +NI+ KV ++TGASSG+GE+TARHLA+ GA++VL ARRTDRL+K+VA+I AGG+AIA Sbjct: 4 VQDNIQGKVAIVTGASSGIGESTARHLAARGAKVVLAARRTDRLDKVVAEIREAGGEAIA 63 Query: 61 VTTDVARRDDVEALVAKGEQHFGRIDVLVNNAGIMPLAPMAKLKVEEWDRMIDVNVKGVL 120 V TDVA+R D++ L A + FGRIDVLVNNAG+MPL+P+ KLKV+EWDR IDVN+KGVL Sbjct: 64 VATDVAKRADLDKLAAATVEAFGRIDVLVNNAGVMPLSPLEKLKVDEWDRTIDVNIKGVL 123 Query: 121 YGVAAALPRFAAQGSGHIINVSSVAGIKVFAGMGTVYSATKFAVRALTEGLRAEAPD-GV 179 YG+AA LPR AQG GHI+NV+S+AG+KVF +GTVYSATK AVRA++EGLR E + GV Sbjct: 124 YGIAAVLPRMQAQGRGHIVNVASIAGLKVFTPIGTVYSATKHAVRAISEGLRVEMGNSGV 183 Query: 180 RTTIISPGAVDSELKTHSSDQETSEALLAWYEANQIPADSVARAIAYAIEQPANVDISEV 239 R TI+SPGAV+SELK S+D E++ + A+YEANQIPADSVARA+ YA+EQPA+VDI+EV Sbjct: 184 RVTIVSPGAVESELKFGSTDAESAAGVKAFYEANQIPADSVARAVVYAVEQPADVDINEV 243 Query: 240 VLRPVAQEF 248 VLRPV+QEF Sbjct: 244 VLRPVSQEF 252 >ref|YP_004427088.1| putative oxidoreductase [Alteromonas macleodii str. 'Deep ecotype'] gb|AEA98090.1| putative oxidoreductase [Alteromonas macleodii str. 'Deep ecotype'] Length = 252 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 163/248 (65%), Positives = 203/248 (81%) Query: 1 MSNNIKDKVVVITGASSGLGETTARHLASLGARLVLGARRTDRLEKLVADITAAGGQAIA 60 ++NNI KVVVITG SSGLGETTARHLASLGA +VLGARR D+LE + ADI AAGG+ Sbjct: 5 LANNISGKVVVITGGSSGLGETTARHLASLGASVVLGARRIDKLEAIAADIRAAGGEVAV 64 Query: 61 VTTDVARRDDVEALVAKGEQHFGRIDVLVNNAGIMPLAPMAKLKVEEWDRMIDVNVKGVL 120 TDV +D+V+ALV ++ FG++DV++NNAG+M +AP+A+ +V+EWDRMID+NVKG+L Sbjct: 65 QATDVTSQDEVKALVNLAQERFGKVDVVINNAGLMAIAPLAETRVDEWDRMIDINVKGLL 124 Query: 121 YGVAAALPRFAAQGSGHIINVSSVAGIKVFAGMGTVYSATKFAVRALTEGLRAEAPDGVR 180 YGVAAALP F QGSGH IN+SSVAGIKVF+ GTVYS TKFAVRA+ EGLR E +R Sbjct: 125 YGVAAALPIFQEQGSGHFINISSVAGIKVFSPGGTVYSGTKFAVRAIAEGLRHEVGGKIR 184 Query: 181 TTIISPGAVDSELKTHSSDQETSEALLAWYEANQIPADSVARAIAYAIEQPANVDISEVV 240 +TIISPGAV+SELK SSD + + + +Y+ N+IP++SVARAIAYAIEQPA+VDI+E+V Sbjct: 185 STIISPGAVESELKHGSSDTQGAAFVKDFYQQNEIPSESVARAIAYAIEQPADVDINEIV 244 Query: 241 LRPVAQEF 248 LRP QEF Sbjct: 245 LRPTVQEF 252 >ref|ZP_01893948.1| Putative oxidoreductase [Marinobacter algicola DG893] gb|EDM48047.1| Putative oxidoreductase [Marinobacter algicola DG893] Length = 252 Score = 297 bits (761), Expect = 8e-79, Method: Composition-based stats. Identities = 162/248 (65%), Positives = 202/248 (81%) Query: 1 MSNNIKDKVVVITGASSGLGETTARHLASLGARLVLGARRTDRLEKLVADITAAGGQAIA 60 ++NNI KVVVITG SSGLGETTARHLASLGA +VLGARR D+LE + ADI AGG+ Sbjct: 5 LANNISGKVVVITGGSSGLGETTARHLASLGASVVLGARRIDKLEAIAADIRTAGGKVAV 64 Query: 61 VTTDVARRDDVEALVAKGEQHFGRIDVLVNNAGIMPLAPMAKLKVEEWDRMIDVNVKGVL 120 TDV +D+V+ALV ++ FG++DV++NNAG+M +AP+A+ +V+EWDRMID+NVKG+L Sbjct: 65 QATDVTSQDEVKALVNLAQERFGKVDVVINNAGLMAIAPLAETRVDEWDRMIDINVKGLL 124 Query: 121 YGVAAALPRFAAQGSGHIINVSSVAGIKVFAGMGTVYSATKFAVRALTEGLRAEAPDGVR 180 YGVAAALP F QGSGH IN+SSVAGIKVF+ GTVYS TKFAVRA+ EGLR E +R Sbjct: 125 YGVAAALPIFQEQGSGHFINISSVAGIKVFSPGGTVYSGTKFAVRAIAEGLRHEVGGKIR 184 Query: 181 TTIISPGAVDSELKTHSSDQETSEALLAWYEANQIPADSVARAIAYAIEQPANVDISEVV 240 +TIISPGAV+SELK SSD + + + +Y+ N+IP++SVARAIAYAIEQPA+VDI+E+V Sbjct: 185 STIISPGAVESELKHGSSDAQGAAFVKDFYQQNEIPSESVARAIAYAIEQPADVDINEIV 244 Query: 241 LRPVAQEF 248 LRP QEF Sbjct: 245 LRPTVQEF 252