BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0189.p (254 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002945292.1| hypothetical protein Vapar_3409 [Variovorax ... 207 9e-52 ref|YP_002540297.1| hydantoin racemase protein [Agrobacterium ra... 207 9e-52 ref|YP_764936.1| putative hydantoin racemase [Rhizobium legumino... 204 8e-51 ref|NP_386182.1| putative hydantoin racemase protein [Sinorhizob... 201 6e-50 ref|YP_001524819.1| hydantoin racemase [Azorhizobium caulinodans... 186 3e-45 >ref|YP_002945292.1| hypothetical protein Vapar_3409 [Variovorax paradoxus S110] gb|ACS20026.1| conserved hypothetical protein [Variovorax paradoxus S110] Length = 219 Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 133/215 (61%), Positives = 157/215 (73%), Gaps = 1/215 (0%) Query: 34 MPHILLINPNSSQATTEMMVAIARTSLPAGYALSGVTARQGPEMIVNAVELAAAGAEVER 93 MP ILLINPN+S ATT+MMV IA PAG ++G TA QGP MIVN EL AA AEV + Sbjct: 1 MPDILLINPNASVATTDMMVGIASAEAPAGCRVTGRTAMQGPPMIVNERELDAAAAEVLK 60 Query: 94 NWREG-GRHSVGCIISAFGDPGIERLRALDGRPVAGLCQASMLEAAEGGRRFGVATVTPE 152 W+ G G I+SAFGDPG+E +R G PV G+ +ASML A EGGRRFG+AT+TP+ Sbjct: 61 VWQAAAGERWDGVIVSAFGDPGVELVRRDAGVPVVGIAEASMLAAGEGGRRFGIATITPD 120 Query: 153 LADVIGEKAQQAGVGALYTGIRLTAGDPRALAADPQALEEALAQAVRACVERDGAEAVVI 212 LA I +A G+ A ++GIRLT GDPR LAAD +ALEEALAQAV+ C+ DGAEAV+I Sbjct: 121 LAVPIEARAAALGLRAQFSGIRLTQGDPRTLAADARALEEALAQAVQRCIADDGAEAVII 180 Query: 213 GGGPLGQAAMALAQRFSVPVIAPIPAAVRYLLKVL 247 GGGPLGQAA+AL RF VPVIAPI AA+R L L Sbjct: 181 GGGPLGQAALALTPRFKVPVIAPIGAAIRLLCSKL 215 >ref|YP_002540297.1| hydantoin racemase protein [Agrobacterium radiobacter K84] gb|ACM28702.1| hydantoin racemase protein [Agrobacterium radiobacter K84] Length = 234 Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 124/219 (56%), Positives = 151/219 (68%) Query: 36 HILLINPNSSQATTEMMVAIARTSLPAGYALSGVTARQGPEMIVNAVELAAAGAEVERNW 95 HI+LINPN+S ATT MM IAR+ LPA + GVTA G MI++ +LAAA A V + Sbjct: 12 HIVLINPNTSAATTAMMTDIARSVLPADVTIEGVTATSGVPMILDDNQLAAAAAGVVKMG 71 Query: 96 REGGRHSVGCIISAFGDPGIERLRALDGRPVAGLCQASMLEAAEGGRRFGVATVTPELAD 155 R G I+SAFGDPGI++LR L PV G+C+ASMLEA+ GRRFG+ATVTP L + Sbjct: 72 LVAARFCDGIIVSAFGDPGIQQLRDLTKVPVVGICEASMLEASAHGRRFGIATVTPNLVN 131 Query: 156 VIGEKAQQAGVGALYTGIRLTAGDPRALAADPQALEEALAQAVRACVERDGAEAVVIGGG 215 KA G+G L+TG RLT GDP+ LAADP+ L+ LA AV E DGAEAV+IGGG Sbjct: 132 GFARKADGLGLGQLFTGTRLTNGDPQKLAADPERLQAELAFAVEQAFELDGAEAVIIGGG 191 Query: 216 PLGQAAMALAQRFSVPVIAPIPAAVRYLLKVLQALEAAA 254 PLGQAA+ L +RFS PVIAPI AAV LL ++A A+ Sbjct: 192 PLGQAAVELGRRFSRPVIAPITAAVASLLLQIKATSPAS 230 >ref|YP_764936.1| putative hydantoin racemase [Rhizobium leguminosarum bv. viciae 3841] emb|CAK12138.1| putative hydantoin racemase [Rhizobium leguminosarum bv. viciae 3841] Length = 226 Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 117/221 (52%), Positives = 156/221 (70%) Query: 34 MPHILLINPNSSQATTEMMVAIARTSLPAGYALSGVTARQGPEMIVNAVELAAAGAEVER 93 M HI++INPN+S+ATT MM IAR S+PAG ++ GVTA +G MI+N ELAA+ V + Sbjct: 1 MTHIVIINPNTSEATTAMMTDIARQSVPAGISVEGVTAARGVPMILNGNELAASADGVVQ 60 Query: 94 NWREGGRHSVGCIISAFGDPGIERLRALDGRPVAGLCQASMLEAAEGGRRFGVATVTPEL 153 + G I+SAFGDPG+E LR + P+ G+C+ASMLEAA GGRRFG+ATVTP+L Sbjct: 61 MGLTAASRADGIIVSAFGDPGLEPLRQMTDIPIIGICEASMLEAAFGGRRFGIATVTPDL 120 Query: 154 ADVIGEKAQQAGVGALYTGIRLTAGDPRALAADPQALEEALAQAVRACVERDGAEAVVIG 213 + KA G+ L+TG RLT+GDP +L+ +P+ L+ ALA AV+ C++ DGAE V+IG Sbjct: 121 VESFAAKAVSLGLANLFTGTRLTSGDPISLSFEPERLQTALAIAVKECLDFDGAEVVIIG 180 Query: 214 GGPLGQAAMALAQRFSVPVIAPIPAAVRYLLKVLQALEAAA 254 GGPLG+AA L Q+ S PVIAPI +A + LLK + L + A Sbjct: 181 GGPLGRAAAQLQQQLSAPVIAPIESATKLLLKRMFPLASVA 221 >ref|NP_386182.1| putative hydantoin racemase protein [Sinorhizobium meliloti 1021] ref|YP_004549390.1| Asp/Glu/hydantoin racemase [Sinorhizobium meliloti AK83] emb|CAC46655.1| Putative hydantoin racemase [Sinorhizobium meliloti 1021] gb|AEG04805.1| Asp/Glu/hydantoin racemase [Sinorhizobium meliloti BL225C] gb|AEG53776.1| Asp/Glu/hydantoin racemase [Sinorhizobium meliloti AK83] gb|AEH78523.1| putative hydantoin racemase protein [Sinorhizobium meliloti SM11] Length = 219 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 123/216 (56%), Positives = 151/216 (69%), Gaps = 6/216 (2%) Query: 36 HILLINPNSSQATTEMMVAIARTSLPAGYALSGVTARQGPEMIVNAVELAAAGAEVERNW 95 H+LLINPNSSQAT+EMMV+IA+ + A++ TAR+ P MI+ ELAAA EV Sbjct: 4 HLLLINPNSSQATSEMMVSIAQKAANGRLAVASATARRSPRMILKPDELAAAADEVVE-- 61 Query: 96 REGGRHSVGC---IISAFGDPGIERLRALDGRPVAGLCQASMLEAAEGGRRFGVATVTPE 152 G RH GC I+SAFGDPG+ LR G PV G+C+ASMLEA+ GRRFGVAT TP+ Sbjct: 62 -IGTRHEPGCLGIIVSAFGDPGLALLRERVGIPVVGICEASMLEASRDGRRFGVATTTPD 120 Query: 153 LADVIGEKAQQAGVGALYTGIRLTAGDPRALAADPQALEEALAQAVRACVERDGAEAVVI 212 LAD I E+A+ G+ LY+GIR T GDP A+A D + L +L AVRA V+ DGAEAV+I Sbjct: 121 LADAIAERARHLGLSHLYSGIRCTPGDPLAVAGDEERLRTSLWHAVRASVDLDGAEAVII 180 Query: 213 GGGPLGQAAMALAQRFSVPVIAPIPAAVRYLLKVLQ 248 GGGPLG+AA L F VPVI PIP+AV +L +LQ Sbjct: 181 GGGPLGKAAEQLQPLFDVPVIGPIPSAVMRVLGLLQ 216 >ref|YP_001524819.1| hydantoin racemase [Azorhizobium caulinodans ORS 571] dbj|BAF87901.1| putative hydantoin racemase [Azorhizobium caulinodans ORS 571] Length = 217 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 115/210 (54%), Positives = 140/210 (66%) Query: 35 PHILLINPNSSQATTEMMVAIARTSLPAGYALSGVTARQGPEMIVNAVELAAAGAEVERN 94 PHILLINPNSS ATT+MM AIA + A+ TA + P MIV EL A+ AEV Sbjct: 4 PHILLINPNSSPATTDMMCAIAERAAGERVAIVCATATRSPAMIVTVPELEASAAEVVEL 63 Query: 95 WREGGRHSVGCIISAFGDPGIERLRALDGRPVAGLCQASMLEAAEGGRRFGVATVTPELA 154 G + +G I+SA+GDPG++ LRA PV G+C+ASML AA GGRRF VATVTP+L Sbjct: 64 GAAHGENCLGIIVSAYGDPGLDALRAQVDVPVVGICEASMLAAARGGRRFSVATVTPDLL 123 Query: 155 DVIGEKAQQAGVGALYTGIRLTAGDPRALAADPQALEEALAQAVRACVERDGAEAVVIGG 214 D I KA+ G+G LY G R + GD RALA + +AL+ L + VR +E DGAEAV+IGG Sbjct: 124 DHIAAKAEALGLGGLYAGARCSDGDARALAGNAEALDRTLGELVRLSIEDDGAEAVIIGG 183 Query: 215 GPLGQAAMALAQRFSVPVIAPIPAAVRYLL 244 GPLG AA L F VPV+ PIP AV +LL Sbjct: 184 GPLGAAADRLRPLFPVPVLGPIPCAVEHLL 213