BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0186.p (563 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773740.1| hemolysin activation/secretion protein [Herb... 837 0.0 ref|YP_984226.1| polypeptide-transport-associated domain-contain... 332 1e-88 ref|YP_001353395.1| hemolysin activation/secretion protein [Jant... 318 2e-84 ref|YP_001351699.1| hemolysin activation/secretion protein [Jant... 317 5e-84 ref|ZP_08506583.1| Putative polypeptide-transport-associated dom... 303 8e-80 >ref|YP_003773740.1| hemolysin activation/secretion protein [Herbaspirillum seropedicae SmR1] gb|ADJ61832.1| hemolysin activation/secretion protein [Herbaspirillum seropedicae SmR1] Length = 569 Score = 837 bits (2163), Expect = 0.0, Method: Composition-based stats. Identities = 437/563 (77%), Positives = 490/563 (87%), Gaps = 11/563 (1%) Query: 1 MKRCVEHYGVAMALLGSAWGAIAQPVAAPVAAVMQQATAPLPEDERFDIRRFAIEGNTLL 60 MKRC++HY +A ALLG+A VAA Q A A ERF+IRRF + GNTLL Sbjct: 18 MKRCLQHYVMAAALLGTA-----------VAAAAQSAPAAAEATERFEIRRFVVAGNTLL 66 Query: 61 SQTRLDEVVAPFTGTGRVYGDIQQALEALENAYRSAGYTAVQVSVPEQELTGGVVRLQVV 120 Q ++ VAPF+G GRVYGDIQQALEALEN YRSAGYTAVQV VPEQEL+ G VR+ VV Sbjct: 67 PQDQVQAAVAPFSGQGRVYGDIQQALEALENLYRSAGYTAVQVHVPEQELSSGEVRIDVV 126 Query: 121 ETVVGKVVVSDNRHFSEQNIRASIPQLVEGSAPNLRRISESVQLANDNPAKQVNVTLTAS 180 ETVVGKV VS+NRHFS+ NIRASIP L EG PNLRRISESVQLANDNPAKQVNVTL+A+ Sbjct: 127 ETVVGKVQVSENRHFSQANIRASIPALKEGVPPNLRRISESVQLANDNPAKQVNVTLSAA 186 Query: 181 ESTNQIDAAITVKDDNPLRVMLNVDNSGNRDTGQWRTGVAVQHSNLFNRDHVATVAYTTS 240 +S +QIDA I VKDD+PLRVMLN+DN+G+ DTG+WRTGVA+QHSNLFNRDHVATVAYTTS Sbjct: 187 QSGDQIDAKIEVKDDDPLRVMLNLDNTGSADTGRWRTGVAIQHSNLFNRDHVATVAYTTS 246 Query: 241 PDSPSGAKVDLYSLGYRLPMYGLGDSLDFIYGKSNVTSGQTLAVNSTLNITGRGEIYALR 300 PDSPSG+KVDLYSLGYRLP+Y LGDSLDFIYGKS+V+SGQTLA+NSTLNITGRGE+YALR Sbjct: 247 PDSPSGSKVDLYSLGYRLPLYELGDSLDFIYGKSSVSSGQTLALNSTLNITGRGEVYALR 306 Query: 301 WNHYLARSGEWSSKLVFGADYKKVDSSCNINGGLLSGASLNTCLPYSTLPLSVSYSAQQQ 360 WNH+ AR+GEWSSKLV GADYKKVDSSC INGGLL+GA+LNTCLPYSTLPLS++YSAQ+Q Sbjct: 307 WNHFFARNGEWSSKLVLGADYKKVDSSCAINGGLLNGATLNTCLPYSTLPLSLTYSAQRQ 366 Query: 361 GVGQVLDYNLGIARNMATGEARRNDALQVTDRYSLFTGSRQSMDNFIIVRGGASWFKVFQ 420 GVG+V+D N+G+ARNMATG+ARRNDALQVTDRYSLFT RQSMDNFI VRGGASW K FQ Sbjct: 367 GVGEVIDANIGVARNMATGQARRNDALQVTDRYSLFTNGRQSMDNFIAVRGGASWLKAFQ 426 Query: 421 NDWQVRLASSLQVSPHALPPVEQFGLAGANTVRGFTERAVAADSGAVVNAELYTPDLLVK 480 NDWQ+RLA +LQ+SPHALP VEQFGLAGA VRGFTERAV+ADSG V+N+ELYTPDLL K Sbjct: 427 NDWQMRLAGNLQLSPHALPAVEQFGLAGATAVRGFTERAVSADSGVVLNSELYTPDLLAK 486 Query: 481 SEARGNLRLLGFFDAARGANNNVTAASTLPSTVTLASFGAGLRYILGRDVSLRLDVARVL 540 SE +G++RLL F DA RGANNNVTA S + ST+TLAS GAGLRY LGRD +LRLDVARVL Sbjct: 487 SELKGSMRLLAFVDAGRGANNNVTANSQVQSTLTLASIGAGLRYALGRDFNLRLDVARVL 546 Query: 541 LNGNSATEQRGDLNAHLSAILGF 563 LNGNS TEQRGDLNAHLSA LGF Sbjct: 547 LNGNSITEQRGDLNAHLSATLGF 569 >ref|YP_984226.1| polypeptide-transport-associated domain-containing protein [Polaromonas naphthalenivorans CJ2] gb|ABM39305.1| Polypeptide-transport-associated domain protein, ShlB-type [Polaromonas naphthalenivorans CJ2] Length = 538 Score = 332 bits (851), Expect = 1e-88, Method: Composition-based stats. Identities = 206/519 (39%), Positives = 304/519 (58%), Gaps = 22/519 (4%) Query: 46 RFDIRRFAIEGNTLLSQTRLDEVVAPFTGTGRVYGDIQQALEALENAYRSAGYTAVQVSV 105 RF I RFA+EGN++L ++ ++A F G R +GD+++A++AL+ AYR GY+ + V + Sbjct: 41 RFAISRFAVEGNSVLPAAEVERLLADFAGADRSFGDVRRAVQALQQAYRQRGYSGILVQL 100 Query: 106 PEQELTGGVVRLQVVETVVGKVVVSDNRHFSEQNIRASIPQLVEGSAPNLRRISESVQLA 165 PEQEL GVVR+QV+E +G+V V N+ FS NIRAS+P L EG+ PN+R IS S+++A Sbjct: 101 PEQELAQGVVRVQVIEPRIGRVSVQGNQVFSTANIRASLPALREGTQPNIRDISASLKVA 160 Query: 166 NDNPAKQVNVTLTASESTNQIDAAITVKDDNPLRVMLNVDNSGNRDTGQWRTGVAVQHSN 225 N NPAKQ+ + L +E + +DA I+V +D P R+ LN DN+G+ +TG+ R GV QH+N Sbjct: 161 NTNPAKQLTLALQGAEQPDAVDAVISVTEDKPWRIGLNADNTGSTETGRTRLGVLYQHAN 220 Query: 226 LFNRDHVATVAYTTSPDSPSGAKVDLYSLGYRLPMYGLGDSLDFIYGKSNVTSGQTLAVN 285 L++ DHV T+ YTTS + PS KV ++ +GY +P+Y LGDS+DF SNV SG A Sbjct: 221 LWDLDHVMTLQYTTSAEKPS--KVSVFGVGYHVPLYALGDSMDFFASHSNVDSGTLTAGV 278 Query: 286 STLNITGRGEIYALRWNHYLARSGEWSSKLVFGADYKKVDSSCNINGGLLSGASLNTCLP 345 L ++G+G ++ R+NH L G+ SS L++G D++ + ++ GG G + Sbjct: 279 LDLQVSGKGTVFGGRYNHNLPLWGDLSSTLIYGVDWRAYKNDIDL-GGFQLGDDV----- 332 Query: 346 YSTLPLSVSYSAQQQGVGQVLDYNLGIARNMATGEARRNDALQVTDRYSLFTGSRQSMDN 405 + PLS+SYS Q +L L +N+ G A DA R G+ S Sbjct: 333 -TVHPLSLSYSGQLSLPSALLGLQLTGLQNIPGG-ANGQDADFSRQR----AGASAS--- 383 Query: 406 FIIVRGGASWFKVFQNDWQVRLASSLQVSPHALPPVEQFGLAGANTVRGFTERAVAADSG 465 + ++R G + + + DWQ+RL + Q + AL P EQFG GA +VRGF ER VA D G Sbjct: 384 YRVLRYGVGYNRQMEGDWQLRLQFNGQATRAALVPGEQFGAGGAGSVRGFREREVAGDQG 443 Query: 466 AVVNAELYTPDLLVKSEARG-NLRLLGFFDAARGANNNVTAASTLPSTVTLASFGAGLRY 524 +AE+ +P+ + A R L F DAA + N +++S G GLR+ Sbjct: 444 QFASAEIQSPNWCPATAAIPVQCRALAFVDAAHVSRNKALPGEE--QRTSISSAGLGLRF 501 Query: 525 ILGRDVSLRLDVARVLLNGNSATEQRGDLNAHLSAILGF 563 L R SL++D RVL G +T GD H++ L + Sbjct: 502 ALDRRASLQVDYGRVLDGG--STRAAGDSRVHVALTLSY 538 >ref|YP_001353395.1| hemolysin activation/secretion protein [Janthinobacterium sp. Marseille] gb|ABR89859.1| Hemolysin activation/secretion protein [Janthinobacterium sp. Marseille] Length = 526 Score = 318 bits (815), Expect = 2e-84, Method: Composition-based stats. Identities = 192/517 (37%), Positives = 288/517 (55%), Gaps = 22/517 (4%) Query: 47 FDIRRFAIEGNTLLSQTRLDEVVAPFTGTGRVYGDIQQALEALENAYRSAGYTAVQVSVP 106 FDI RF + GNTLL +D +VAP+ G R + D+ +ALEALE AY + GY V++ +P Sbjct: 32 FDINRFDVRGNTLLPPQTVDRLVAPYLGKDRDFADVMKALEALEAAYHARGYQLVRIDLP 91 Query: 107 EQELTGGVVRLQVVETVVGKVVVSDNRHFSEQNIRASIPQLVEGSAPNLRRISESVQLAN 166 EQEL G V L VV+ +G VV+ N HF + NIR S+P L EG P+L+ +S+S++LAN Sbjct: 92 EQELNQGTVVLNVVQAKIGNVVIEGNSHFDDANIRRSLPALQEGQTPDLKAVSKSLKLAN 151 Query: 167 DNPAKQVNVTLTASESTNQIDAAITVKDDNPLRVMLNVDNSGNRDTGQWRTGVAVQHSNL 226 +NPAK+V + + ++E ++++A + V D++ R +N DN+G TG+ R GV +Q++N+ Sbjct: 152 ENPAKKVTMRMKSAEQDDEVEATLAVVDESVWRTTINFDNTGVASTGRTRAGVVLQNANM 211 Query: 227 FNRDHVATVAYTTSPDSPSGAKVDLYSLGYRLPMYGLGDSLDFIYGKSNVTSGQTLAVNS 286 F DHV ++ YTT+ + PS +V +Y +GY +P+Y LGDS+DF S+V +G A Sbjct: 212 FGLDHVMSLQYTTTLEEPS--RVGVYGVGYHIPLYALGDSMDFYASYSDVDAGTVTAGIF 269 Query: 287 TLNITGRGEIYALRWNHYLARSGEWSSKLVFGADYKKVDSSCNINGGLLSGASLNTCLPY 346 + ++G+G +Y R+N LA G ++SKL++G D K+ +S + G L GA + Sbjct: 270 DIAVSGKGSMYGARYNQNLATVGNYASKLMYGIDLKQYKNSMQLLGVEL-GADI------ 322 Query: 347 STLPLSVSYSAQQQGVGQVLDYNLGIARNMATGEARRNDALQVTDRYSLFTGSRQSMDNF 406 + P+SV Y + + + N++ G N + DR + N+ Sbjct: 323 TVRPVSVGYQGDWSWGDGAIGFATTLLHNISGGS---NGSQSDFDRVRF-----DAKANY 374 Query: 407 IIVRGGASWFKVFQNDWQVRLASSLQVSPHALPPVEQFGLAGANTVRGFTERAVAADSGA 466 +R G S + W R + Q + AL P EQFG GA +VRGF ER VA DSG Sbjct: 375 TAIRVGGSLTQALPEQWLARAIINGQYTKDALIPGEQFGAGGAASVRGFLEREVANDSGI 434 Query: 467 VVNAELYTPDLLVKSEARGNLRLLGFFDAARGANNNVTAASTLPSTVTLASFGAGLRYIL 526 N E+YT L + R L F+D A N+ ST+++ S G GLR L Sbjct: 435 TGNFEVYTAPLC--GSGKWQCRALAFYDHAYLTRNHALPGEF--STISINSVGLGLRLQL 490 Query: 527 GRDVSLRLDVARVLLNGNSATEQRGDLNAHLSAILGF 563 G DV+ ++DV V L+ + T + GD H L F Sbjct: 491 GNDVNFQVDVGHV-LHAEATTTRNGDNRVHARLALSF 526 >ref|YP_001351699.1| hemolysin activation/secretion protein [Janthinobacterium sp. Marseille] gb|ABR89864.1| Hemolysin activation/secretion protein [Janthinobacterium sp. Marseille] Length = 526 Score = 317 bits (811), Expect = 5e-84, Method: Composition-based stats. Identities = 191/517 (36%), Positives = 288/517 (55%), Gaps = 22/517 (4%) Query: 47 FDIRRFAIEGNTLLSQTRLDEVVAPFTGTGRVYGDIQQALEALENAYRSAGYTAVQVSVP 106 FDI RF + GNTLL +D +VAP+ G R + D+ +ALEALE AY + GY V++ +P Sbjct: 32 FDINRFDVRGNTLLPSQTVDSLVAPYLGKDRDFADVMKALEALEAAYHARGYQLVRIDLP 91 Query: 107 EQELTGGVVRLQVVETVVGKVVVSDNRHFSEQNIRASIPQLVEGSAPNLRRISESVQLAN 166 EQEL G V L VV+ +G VV+ N HF + NIR S+P L EG P+L+ +S+S++LAN Sbjct: 92 EQELNQGTVVLNVVQAKIGNVVIEGNSHFDDANIRRSLPALQEGQTPDLKAVSKSLKLAN 151 Query: 167 DNPAKQVNVTLTASESTNQIDAAITVKDDNPLRVMLNVDNSGNRDTGQWRTGVAVQHSNL 226 +NPAK+V + + ++E ++++A + V D++ R +N DN+G TG+ R GV +Q++N+ Sbjct: 152 ENPAKKVTMRMKSAEQDDEVEATLAVVDESVWRTTINFDNTGVASTGRTRAGVVLQNANM 211 Query: 227 FNRDHVATVAYTTSPDSPSGAKVDLYSLGYRLPMYGLGDSLDFIYGKSNVTSGQTLAVNS 286 F DHV ++ YTT+ + PS +V +Y +GY +P+Y LGDS+DF S+V +G A Sbjct: 212 FGLDHVMSLQYTTTLEEPS--RVGVYGVGYHIPLYALGDSMDFYASYSDVDAGTVTAGIF 269 Query: 287 TLNITGRGEIYALRWNHYLARSGEWSSKLVFGADYKKVDSSCNINGGLLSGASLNTCLPY 346 + ++G+G +Y R+N LA G ++SKL++G D K+ +S + G L GA + Sbjct: 270 DIAVSGKGSMYGARYNQNLATVGNYASKLMYGIDLKQYKNSMQLLGVEL-GADI------ 322 Query: 347 STLPLSVSYSAQQQGVGQVLDYNLGIARNMATGEARRNDALQVTDRYSLFTGSRQSMDNF 406 + P+S+ Y + + + N++ G N + DR + N+ Sbjct: 323 TVRPVSIGYQGDWSWGDGAIGFATTLLHNISGGS---NGSQSDFDRVRF-----DAKANY 374 Query: 407 IIVRGGASWFKVFQNDWQVRLASSLQVSPHALPPVEQFGLAGANTVRGFTERAVAADSGA 466 +R G S + W R + Q + AL P EQFG GA +VRGF ER VA DSG Sbjct: 375 TAIRVGGSLTQALPEQWLARAIINGQYTKDALIPGEQFGAGGAASVRGFLEREVANDSGI 434 Query: 467 VVNAELYTPDLLVKSEARGNLRLLGFFDAARGANNNVTAASTLPSTVTLASFGAGLRYIL 526 N E+YT L + R L F+D A N+ ST+++ S G GLR L Sbjct: 435 TGNFEVYTAPLC--GSGKWQCRALAFYDHAYLTRNHALPGEF--STISINSVGLGLRLQL 490 Query: 527 GRDVSLRLDVARVLLNGNSATEQRGDLNAHLSAILGF 563 G DV+ ++DV V L+ + T + GD H L F Sbjct: 491 GNDVNFQVDVGHV-LHAEATTTRSGDNRVHARLALSF 526 >ref|ZP_08506583.1| Putative polypeptide-transport-associated domain protein, ShlB-type [Methyloversatilis universalis FAM5] gb|EGK69710.1| Putative polypeptide-transport-associated domain protein, ShlB-type [Methyloversatilis universalis FAM5] Length = 522 Score = 303 bits (775), Expect = 8e-80, Method: Composition-based stats. Identities = 187/501 (37%), Positives = 283/501 (56%), Gaps = 26/501 (5%) Query: 43 EDERFDIRRFAIEGNTLLSQTRLDEVVAPFTGTGRVYGDIQQALEALENAYRSAGYTAVQ 102 E RF++R +++ G T+ + +D ++AP+TG + I+ A AL+ AY S G+ A Q Sbjct: 24 EGPRFEVRAYSLSGGTVFRPSEVDALLAPYTGGEVGFSQIEAARTALQAAYHSRGFGAAQ 83 Query: 103 VSVPEQELTGGVVRLQVVETVVGKVVVSDNRHFSEQNIRASIPQLVEGSAPNLRRISESV 162 VS+PEQEL+GG V L+V+E + ++ + +H E NIR S+P L++G PN ++ + Sbjct: 84 VSIPEQELSGGTVILEVLEPRLTEITLQGAKHHDEANIRRSLPGLIDGGMPNTTDVARQL 143 Query: 163 QLANDNPAKQVNVTLTASESTNQIDAAITVKDDNPLRVMLNVDNSGNRDTGQWRTGVAVQ 222 LAN+N +KQ +VT + +I A I+V DDNP+R + VDNSG TG R V +Q Sbjct: 144 SLANENSSKQTDVTFKSGRKPGEIGATISVADDNPVRRFVTVDNSGTPSTGTHRVAVGLQ 203 Query: 223 HSNLFNRDHVATVAYTTSPDSPSGAKVDLYSLGYRLPMYGLGDSLDFIYGKSNVTSGQTL 282 H+NLFNRDHVAT YTTS + P A V ++ LGYR+P+Y G+S+D + G SNV SGQ Sbjct: 204 HANLFNRDHVATFQYTTSLEQP--ADVTIFGLGYRIPLYESGNSIDLVAGYSNVNSGQVQ 261 Query: 283 AVNSTLNITGRGEIYALRWNHYLARSGEWSSKLVFGADYKKVDSSCNINGGLLSGASLNT 342 +NST +++G G I++ R+N +L R GE S ++ AD++ DSS + A+ NT Sbjct: 262 VLNSTASVSGAGRIFSARYNWHLPREGELSQRISLAADWRDFDSSFVV-------ANTNT 314 Query: 343 CL--PYSTLPLSVSYSAQQQGVGQVLDYNLGIARNMATGEARRNDALQVTDRYSLFTGSR 400 L T P+S+S+ + + N+ ARN+ GE + A F SR Sbjct: 315 SLVPRVITHPISLSWYGNWRNDLREAGLNVSFARNLPGGEHGGSTA---------FDASR 365 Query: 401 QSMD-NFIIVRGGASWFKVFQNDWQVRLASSLQVSPHALPPVEQFGLAGANTVRGFTERA 459 F ++R G SW ++ DW+VRL + Q + L EQFG+ GA++VRG ER Sbjct: 366 NGASPRFSVLRAGGSWLQLLPRDWRVRLQAQAQYTTDELVAGEQFGIGGADSVRGLRERV 425 Query: 460 VAADSGAVVNAELYTPDLLVKSEARGNLRLLGFFDAARGANNNVTAASTLPSTVTLASFG 519 +A D G ++A+L T L + +R + F DAA A+ + + V S G Sbjct: 426 LADDKGWRLSADLETSAWLHDTWV---MRGVLFADAAHIYRVRPLASEDVSNGVF--SAG 480 Query: 520 AGLRYILGRDVSLRLDVARVL 540 GLR ++ R+D A+++ Sbjct: 481 VGLRVNFSTWLAGRIDYAQLI 501